| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318895
Identifier: 158318895
GI number: 158318895
Start: 8761820
End: 8763790
Strand: Direct
Name: 158318895
Synonym: Franean1_7178
Alternate gene names: NA
Gene position: 8761820-8763790 (Clockwise)
Preceding gene: 158318890
Following gene: 158318896
Centisome position: 97.55
GC content: 75.19
Gene sequence:
>1971_bases ATGGCCGGGGGGAAACGGGGACGGTCGGGGCTCAGGCAGGCGTTCGACCAGCTGAACAAGCTGGACCGGCAGAGCCTGTC ACCGGAGCGGTGGGACACCGTGGTCGAACTGCGCGACGTCCTGGAGCAGATCGAGCGGCTGCAGGCGGGCGAGTTCCGGA TCGTCGCCGCGGGCGCCATGGCCTCGATGAAGTCCACGATGCTGGAGCTGCTCCTCGGCCGGCCTGACACCCTGCTGGTC GGAGCCGGCGCGGTCACCGCGGTGCCGACCCTGCTCCGGCTCGTGCAGGCCGAGGACGGGCGTCCCGGGCGGACCCGGGT GACGATGCTGACCGAGGCCGCGGCGCTGCGCCGGGCACGCGCCCTGCTGGATCTGGATCACGCCGACGCCCGTGCCCTCG GCGAGCTGGCCGCGCTGGACCACCCGAACCGTCACGTGGTCGGCGCGCTCGCCCGGGCGGCGCAGACCTTCGAGTACGGC GTCAGCTACGAGTTGAAGGAGTTCCTCGCCCTCGGCGGCGAGCTGTCGATCGGCGGCTTCGGCGTGCCGCTTCTGGCTCG GGTGATCGTCGACGACGTGCCGGTCCCGGCCTCGGTCTGGGACCTGTCCTGGGCCGGCGGCCGCACCGTCGTCGTGACCG ACCTGCCGGGCACCGGGCAGGGGCGCGCGCTGGAGAACCTGGTCCGGGCCGAGCATCAGGCGGTCACCCACGTCTCGCTG AACGTCGTCGCCTTCTCGGGCGGCAGTGATTTCGAGCCGCCGCCGGTCCAGGCGGAGCCGGACTGCGTCCTCGTCGCCAC CAAGCTCGACCGGATCGAGAACCCCGCCGATCCGAACGAGCTGCGCGCGGTGGAGGAGGCGGTCGCGGCCACCCTGCGGC AGTGGCGGTTGAGCGGCCGGCAGGCGCTGGTCGCCGCGGTGTCCGGCACCTGGGCGTTCGCGGACGAGACCGGGTGGCTC GACTTCGACCCGCGCAGCCCCGCGGGGGCCTGGGGGTCGGCGCAGGACAGCCGCCGGGTCTGGGCGGACGCCGCCTGGGA CCCGCACGGGCCGACCGAGGGCCAGCTGCGGCAGGCCGTGGCGGCCGCGATGCTCGACGGCGGCGCGAAACGGCTGCGCG CCCAGATCGCCGGCCTGGCCACCGACGCCCCGGCCCGGGTCGACGAGGCCGAGCTGGACCGTCTGGTGACACAGGCACGG CGACTGGTCACGGCGGCGCTGACCGACGCCGGCGATCCCAGGGAGGAGGAAGACAAGGTCGACCGGCTCCGGAACCTCTT CGACGGCGACCAGGAGCCGGTGGACGCCCTGCGGGAGATCGCCCGGACGGCCGCCGCCACCGCGGTCTACGGGCTGCCCG CCTGGGACGTCATCCGCAACTCGGCGTTCCGCCGCGACGGCGTCTGGCGCGGTTCGATGCCGCAGGTGCGGGGCGTCCTG GCAGCCGTCGACCTGGCAGGCATCGCCACCGACGCGATCACCGAGGCAGAGGACGAGCTCGCGGACAGGCTCGCCAGCTG GTCCGGGACCTTCGGCATCACGGCTGACGGCCGGGGCCGTTCGCCCGCGGCGGCGGACACCGACCATGGCGCCGCCGAAC AGTTCGCGGCGCTCGGCGGCCGGCTGCTGCGGCTGCTGACCGACAACCGGGCCCGTGGCGGCCCGGCCGACACCTCGGGC GGCCCGGCCGATGCCCCGGGCGGCCGGGATTTCGGATCCGGCGACGGGCAGTCGGAGCGGCTCAGCTTCCGGCTGGTGGC ACGCACCCGGGCGGAGCTGGCGATGTTGCTGGAACACCGGCTCGTCGACCTGCTCGGCCCGATGGTCGACGAGGCGCGGG CCGACGTCCGGGCGGAGCTGCACCGCCGTTCGGTGGCACTGAGCCATGTCGGCGGCGCCCCGCCGGCGCTGCGGGCCGTC GAGCGGGAGCTGCGCAGGCTCGCGGCCGCGGGGACCGGCAGTGCCCGGTGA
Upstream 100 bases:
>100_bases TTCACGCCCGTGCCCGCGCGCTTCTCGCGCCGCCCGCTGCCGGGTATTACGCGGGACCTTTGTCAGGTGCGGAGAAGCAG AGAACGGGGAGGACGGGAGC
Downstream 100 bases:
>100_bases GCCGGCGGAGCCGCCCTGGCTGGAGCTGCGCCACGCTCCCACGGCCACGGCTCCCGCAGGCCCGTCCGCCGCGGCACAGC CGCCGGGCACGGTCACGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 656; Mature: 655
Protein sequence:
>656_residues MAGGKRGRSGLRQAFDQLNKLDRQSLSPERWDTVVELRDVLEQIERLQAGEFRIVAAGAMASMKSTMLELLLGRPDTLLV GAGAVTAVPTLLRLVQAEDGRPGRTRVTMLTEAAALRRARALLDLDHADARALGELAALDHPNRHVVGALARAAQTFEYG VSYELKEFLALGGELSIGGFGVPLLARVIVDDVPVPASVWDLSWAGGRTVVVTDLPGTGQGRALENLVRAEHQAVTHVSL NVVAFSGGSDFEPPPVQAEPDCVLVATKLDRIENPADPNELRAVEEAVAATLRQWRLSGRQALVAAVSGTWAFADETGWL DFDPRSPAGAWGSAQDSRRVWADAAWDPHGPTEGQLRQAVAAAMLDGGAKRLRAQIAGLATDAPARVDEAELDRLVTQAR RLVTAALTDAGDPREEEDKVDRLRNLFDGDQEPVDALREIARTAAATAVYGLPAWDVIRNSAFRRDGVWRGSMPQVRGVL AAVDLAGIATDAITEAEDELADRLASWSGTFGITADGRGRSPAAADTDHGAAEQFAALGGRLLRLLTDNRARGGPADTSG GPADAPGGRDFGSGDGQSERLSFRLVARTRAELAMLLEHRLVDLLGPMVDEARADVRAELHRRSVALSHVGGAPPALRAV ERELRRLAAAGTGSAR
Sequences:
>Translated_656_residues MAGGKRGRSGLRQAFDQLNKLDRQSLSPERWDTVVELRDVLEQIERLQAGEFRIVAAGAMASMKSTMLELLLGRPDTLLV GAGAVTAVPTLLRLVQAEDGRPGRTRVTMLTEAAALRRARALLDLDHADARALGELAALDHPNRHVVGALARAAQTFEYG VSYELKEFLALGGELSIGGFGVPLLARVIVDDVPVPASVWDLSWAGGRTVVVTDLPGTGQGRALENLVRAEHQAVTHVSL NVVAFSGGSDFEPPPVQAEPDCVLVATKLDRIENPADPNELRAVEEAVAATLRQWRLSGRQALVAAVSGTWAFADETGWL DFDPRSPAGAWGSAQDSRRVWADAAWDPHGPTEGQLRQAVAAAMLDGGAKRLRAQIAGLATDAPARVDEAELDRLVTQAR RLVTAALTDAGDPREEEDKVDRLRNLFDGDQEPVDALREIARTAAATAVYGLPAWDVIRNSAFRRDGVWRGSMPQVRGVL AAVDLAGIATDAITEAEDELADRLASWSGTFGITADGRGRSPAAADTDHGAAEQFAALGGRLLRLLTDNRARGGPADTSG GPADAPGGRDFGSGDGQSERLSFRLVARTRAELAMLLEHRLVDLLGPMVDEARADVRAELHRRSVALSHVGGAPPALRAV ERELRRLAAAGTGSAR >Mature_655_residues AGGKRGRSGLRQAFDQLNKLDRQSLSPERWDTVVELRDVLEQIERLQAGEFRIVAAGAMASMKSTMLELLLGRPDTLLVG AGAVTAVPTLLRLVQAEDGRPGRTRVTMLTEAAALRRARALLDLDHADARALGELAALDHPNRHVVGALARAAQTFEYGV SYELKEFLALGGELSIGGFGVPLLARVIVDDVPVPASVWDLSWAGGRTVVVTDLPGTGQGRALENLVRAEHQAVTHVSLN VVAFSGGSDFEPPPVQAEPDCVLVATKLDRIENPADPNELRAVEEAVAATLRQWRLSGRQALVAAVSGTWAFADETGWLD FDPRSPAGAWGSAQDSRRVWADAAWDPHGPTEGQLRQAVAAAMLDGGAKRLRAQIAGLATDAPARVDEAELDRLVTQARR LVTAALTDAGDPREEEDKVDRLRNLFDGDQEPVDALREIARTAAATAVYGLPAWDVIRNSAFRRDGVWRGSMPQVRGVLA AVDLAGIATDAITEAEDELADRLASWSGTFGITADGRGRSPAAADTDHGAAEQFAALGGRLLRLLTDNRARGGPADTSGG PADAPGGRDFGSGDGQSERLSFRLVARTRAELAMLLEHRLVDLLGPMVDEARADVRAELHRRSVALSHVGGAPPALRAVE RELRRLAAAGTGSAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69844; Mature: 69713
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGGKRGRSGLRQAFDQLNKLDRQSLSPERWDTVVELRDVLEQIERLQAGEFRIVAAGAM CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHH ASMKSTMLELLLGRPDTLLVGAGAVTAVPTLLRLVQAEDGRPGRTRVTMLTEAAALRRAR HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHH ALLDLDHADARALGELAALDHPNRHVVGALARAAQTFEYGVSYELKEFLALGGELSIGGF HHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCC GVPLLARVIVDDVPVPASVWDLSWAGGRTVVVTDLPGTGQGRALENLVRAEHQAVTHVSL CHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHEEEE NVVAFSGGSDFEPPPVQAEPDCVLVATKLDRIENPADPNELRAVEEAVAATLRQWRLSGR EEEEECCCCCCCCCCCCCCCCEEEEEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCC QALVAAVSGTWAFADETGWLDFDPRSPAGAWGSAQDSRRVWADAAWDPHGPTEGQLRQAV CEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHH AAAMLDGGAKRLRAQIAGLATDAPARVDEAELDRLVTQARRLVTAALTDAGDPREEEDKV HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH DRLRNLFDGDQEPVDALREIARTAAATAVYGLPAWDVIRNSAFRRDGVWRGSMPQVRGVL HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHH AAVDLAGIATDAITEAEDELADRLASWSGTFGITADGRGRSPAAADTDHGAAEQFAALGG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHH RLLRLLTDNRARGGPADTSGGPADAPGGRDFGSGDGQSERLSFRLVARTRAELAMLLEHR HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEHHHHHHHHHHHHHHHHH LVDLLGPMVDEARADVRAELHRRSVALSHVGGAPPALRAVERELRRLAAAGTGSAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AGGKRGRSGLRQAFDQLNKLDRQSLSPERWDTVVELRDVLEQIERLQAGEFRIVAAGAM CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHH ASMKSTMLELLLGRPDTLLVGAGAVTAVPTLLRLVQAEDGRPGRTRVTMLTEAAALRRAR HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHH ALLDLDHADARALGELAALDHPNRHVVGALARAAQTFEYGVSYELKEFLALGGELSIGGF HHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCC GVPLLARVIVDDVPVPASVWDLSWAGGRTVVVTDLPGTGQGRALENLVRAEHQAVTHVSL CHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHEEEE NVVAFSGGSDFEPPPVQAEPDCVLVATKLDRIENPADPNELRAVEEAVAATLRQWRLSGR EEEEECCCCCCCCCCCCCCCCEEEEEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCC QALVAAVSGTWAFADETGWLDFDPRSPAGAWGSAQDSRRVWADAAWDPHGPTEGQLRQAV CEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHH AAAMLDGGAKRLRAQIAGLATDAPARVDEAELDRLVTQARRLVTAALTDAGDPREEEDKV HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH DRLRNLFDGDQEPVDALREIARTAAATAVYGLPAWDVIRNSAFRRDGVWRGSMPQVRGVL HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHH AAVDLAGIATDAITEAEDELADRLASWSGTFGITADGRGRSPAAADTDHGAAEQFAALGG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHH RLLRLLTDNRARGGPADTSGGPADAPGGRDFGSGDGQSERLSFRLVARTRAELAMLLEHR HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEHHHHHHHHHHHHHHHHH LVDLLGPMVDEARADVRAELHRRSVALSHVGGAPPALRAVERELRRLAAAGTGSAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA