| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318896
Identifier: 158318896
GI number: 158318896
Start: 8763780
End: 8766680
Strand: Direct
Name: 158318896
Synonym: Franean1_7179
Alternate gene names: NA
Gene position: 8763780-8766680 (Clockwise)
Preceding gene: 158318895
Following gene: 158318897
Centisome position: 97.57
GC content: 71.35
Gene sequence:
>2901_bases GTGCCCGGTGAGCCGGCGGAGCCGCCCTGGCTGGAGCTGCGCCACGCTCCCACGGCCACGGCTCCCGCAGGCCCGTCCGC CGCGGCACAGCCGCCGGGCACGGTCACGCTCCGGCTGGGCGCACACACCGTCCCAGGACTGATCGAACGGGTCGACCTGC TCGACGGCACGACGGTCGTCTCCACGACCCGGGTACGCCCGCCGGTCGACGCCGGCACGGGACCGGTCGAGCTGCGGCTC GAGCCGTGGACACGTCACCCCGCCGCCCCGACCGTCGGGATCTTCTACCGCCGGCGCCAGCAGGGAAGCCGCCTGGCCGC GCCGCTCACCCGCGGCAGCTTCCGGCTGCACCCGTCTCAGATCAAGGAAGCGAAGATGACGCAACCGGAAGCGACCAGCG TGGACGGCGACGTGAGCGGCGGCCCCGCCATGCCGGCAGCGGCGCCGGCCGGAATCTCGGCGACGCTGGACTTCGGCACC AGCGGTGCCGTGGCAGGCGTGCTGGACGTCCGCAGCGTGCAGCGGGTGGACGACGGCTCGCTACCGGCGGACAGCCTCGC CCGGGCCGAAAGCCTGCTGGGCCTCGATCAGCCGGACCCGGCTGTCGACCGTGCCCTGAACATCGAGATGGAGACCCGCG ACGACCCACTCGCCCGGGCTGAGGCGTGGAAGACGGTCTTCGAGGGTCCCCCGCTGCGGTTCAACCATCTCAAGACCGGT CGGCACCGCAGCAGCGATCTCGTCATCGACGGCGAGCGGGTCGACTTCGCCGACGAGGTGACGGGCGTGCGGCTCCGCCA CCGGGGAGTGAAGAGGTTCCTGGCCGATCTCGACCATCGACTGCCGAACACCCGGTTGTCCGCCCGCGAGGTGTTCCCCC GGATCTACCAGCGGTTCGCGGACCTGACCCGCGACGACGTGCAGCTCGCGGTGCCCGTACCGCGAATCCACGTCACCTTT CCGACGAAGCTCCCGCCGGACCGCCGCGCGGCCGTGCTCGACGAGCTGCGCCGACACGGACTCGCCCCGCTGATCGAGAT GAACGTCGACGAGTCCGCCGCCGCCGCCGGATTCTTCCTGATGAGACGCTTCGGCGCGGACGCCCTGCTCGGGGCCGAGG CGTTCAAGCTGCACGCCCGCTGCCCGGACGGCCCGCGGGCCTGGGAGGACCCACGGCTGTGGGACGCCGCCCAGCAGTGG CACGAGAACCTCCTCGTGATCGATGTCGGTGGGGGGACGACCGACTGCGCACTGGTCAAGACGGTCCTCACCGACGTCAC CCCGCCCGCGGCGGGAGACTGCCCGGGGCGTTTCCACCGGCTCGCGCCGGAAGTGCTCGCCTCGGGCGGACGTCTTCATC TCGGCGGCGACCTGCTGACCCTGGAGATCTTCCGGCTACTCAAGGAACGGCTCGGGATCGCGACGAACGCGACGGTCTTC GAAGGGCTCGACGACACGAAGGGGGCGCAGCGCCGCGCCGTTTTCGACGCGCTCTGGAACGCGGCCCAGGCGGTGAAACA CCGGGGCCTGCGCGACCATGCACCGCGCCCGGTCGAGATCCGGATCGGCGGCGATCCGGTGACCGGCGGCACGGACACCG GCGGCACGGACACCGGTGACGGCCCGGTCCGGATCCCCGCCGATCTGGTGCCGGACCGCACGGCCGCGACCTCCCCGGTC GTCATCACCGCGCAGGAGCTGGACGGGATCATCAGCCCGATCGTGGACCAGATCGCCTCGCTGGCCGCCGGGATAGCCCT CGGCGGCCTGTCGGTGCGGGGCCAGGGCGGCCAGTCGGTGGACCGGGTGGCGCTGTCCGGCGGATCGATGCTGGCAGAGG CGCTGCGCTACCGGGTGGAGGACGCCCTGCGCGCCAGATTCGACGCCGACGGCCTGGACTCGACGTTCGAGGTCGAGTTC GACGCGGTGCACTGCAAGACCGGGACCGCGCTCGGCGGCATGTACCTGAACGCCATGGCCGATCTCGCGCCGGGCGACCC GCAGTCCCAGGAGGTGATCGAACAGCTGCGGAAGGGAGCTTCCTACTTCGGTGTCGACTCCTCCCGCCTGCACGTCAATC TGGCCGCTGACTTCGCCCTCCTCCAGACCATTCAGGGCGTGGCCGCGGAACCGATCTTCAGGCGTGGGCAGCCACTCGCC GGGGACGGCGACACCGCGTACGCCGAGAGCCGGATCCCCTACCCCCTCGTCTCGTTGATCAACGTCCATCGATACGACGT GCCGCCCCTCGATGGCCGCGGCGGCGAGGGAACGGAGGCGGACCCCTCCGTGTGGGGCTCCTACGAGGGGGTTCCGCAGC CCCTCGTAGGCGAACTCACCAGGCAGGGCGTCACCATGCGCTTCGAGATCAACCAGCAGGAACGCCTCACCCTGATCCTG GCGAAGGGACAGCCGCGGCCAGTGCTCGACGTCCCGCCGCTGCCGTTGCAGGATCCGCCGCCCGACGGCTTGGTGCGCGA CGGGGTGCTCCGGTACGCCCTCCACCACGACGTGGTGCACCAGGGGGCCGGCATCTTCGACAGCCTGGTGGTCGACGCCC AGTGCCCTGTTCCCGACGGTGGCATCGTGCTGCCGATCTCCGGTGTCCGTCTGCTGTACCGGCAGCAGACGGAGCCGGCT TCCGCGCCGCCCGGACCGCCTCCGCCAACCAGCCCGGCCGCACCCGGGTATGTCCTCCTGCTGGAGGTTCCCGCCGGGCA CCGCTGGCTCTCCATCGACTCCAACGGCGATCTGCGCACCCACCGGGAGCGTCCACTGCCGCACACCGTGGACTCGCCGG AGGATCTGCTGACCGCGCCGGAGGGTTACGTCTTCCGCACCGAGCTGACCTCACGACTGGACTACGACCCGACCAAGGAT CCGTTCAGTGGCATTCACTGA
Upstream 100 bases:
>100_bases CACCGCCGTTCGGTGGCACTGAGCCATGTCGGCGGCGCCCCGCCGGCGCTGCGGGCCGTCGAGCGGGAGCTGCGCAGGCT CGCGGCCGCGGGGACCGGCA
Downstream 100 bases:
>100_bases CCCGGGTACCGCCGCCTCGCGGTCGGCGGACACCACTGCGACCACCGTGGAGAGCACCACCGCGGGCACCGCTGCGAGCG ACCAGCTGGCGCGCGAGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 966; Mature: 965
Protein sequence:
>966_residues MPGEPAEPPWLELRHAPTATAPAGPSAAAQPPGTVTLRLGAHTVPGLIERVDLLDGTTVVSTTRVRPPVDAGTGPVELRL EPWTRHPAAPTVGIFYRRRQQGSRLAAPLTRGSFRLHPSQIKEAKMTQPEATSVDGDVSGGPAMPAAAPAGISATLDFGT SGAVAGVLDVRSVQRVDDGSLPADSLARAESLLGLDQPDPAVDRALNIEMETRDDPLARAEAWKTVFEGPPLRFNHLKTG RHRSSDLVIDGERVDFADEVTGVRLRHRGVKRFLADLDHRLPNTRLSAREVFPRIYQRFADLTRDDVQLAVPVPRIHVTF PTKLPPDRRAAVLDELRRHGLAPLIEMNVDESAAAAGFFLMRRFGADALLGAEAFKLHARCPDGPRAWEDPRLWDAAQQW HENLLVIDVGGGTTDCALVKTVLTDVTPPAAGDCPGRFHRLAPEVLASGGRLHLGGDLLTLEIFRLLKERLGIATNATVF EGLDDTKGAQRRAVFDALWNAAQAVKHRGLRDHAPRPVEIRIGGDPVTGGTDTGGTDTGDGPVRIPADLVPDRTAATSPV VITAQELDGIISPIVDQIASLAAGIALGGLSVRGQGGQSVDRVALSGGSMLAEALRYRVEDALRARFDADGLDSTFEVEF DAVHCKTGTALGGMYLNAMADLAPGDPQSQEVIEQLRKGASYFGVDSSRLHVNLAADFALLQTIQGVAAEPIFRRGQPLA GDGDTAYAESRIPYPLVSLINVHRYDVPPLDGRGGEGTEADPSVWGSYEGVPQPLVGELTRQGVTMRFEINQQERLTLIL AKGQPRPVLDVPPLPLQDPPPDGLVRDGVLRYALHHDVVHQGAGIFDSLVVDAQCPVPDGGIVLPISGVRLLYRQQTEPA SAPPGPPPPTSPAAPGYVLLLEVPAGHRWLSIDSNGDLRTHRERPLPHTVDSPEDLLTAPEGYVFRTELTSRLDYDPTKD PFSGIH
Sequences:
>Translated_966_residues MPGEPAEPPWLELRHAPTATAPAGPSAAAQPPGTVTLRLGAHTVPGLIERVDLLDGTTVVSTTRVRPPVDAGTGPVELRL EPWTRHPAAPTVGIFYRRRQQGSRLAAPLTRGSFRLHPSQIKEAKMTQPEATSVDGDVSGGPAMPAAAPAGISATLDFGT SGAVAGVLDVRSVQRVDDGSLPADSLARAESLLGLDQPDPAVDRALNIEMETRDDPLARAEAWKTVFEGPPLRFNHLKTG RHRSSDLVIDGERVDFADEVTGVRLRHRGVKRFLADLDHRLPNTRLSAREVFPRIYQRFADLTRDDVQLAVPVPRIHVTF PTKLPPDRRAAVLDELRRHGLAPLIEMNVDESAAAAGFFLMRRFGADALLGAEAFKLHARCPDGPRAWEDPRLWDAAQQW HENLLVIDVGGGTTDCALVKTVLTDVTPPAAGDCPGRFHRLAPEVLASGGRLHLGGDLLTLEIFRLLKERLGIATNATVF EGLDDTKGAQRRAVFDALWNAAQAVKHRGLRDHAPRPVEIRIGGDPVTGGTDTGGTDTGDGPVRIPADLVPDRTAATSPV VITAQELDGIISPIVDQIASLAAGIALGGLSVRGQGGQSVDRVALSGGSMLAEALRYRVEDALRARFDADGLDSTFEVEF DAVHCKTGTALGGMYLNAMADLAPGDPQSQEVIEQLRKGASYFGVDSSRLHVNLAADFALLQTIQGVAAEPIFRRGQPLA GDGDTAYAESRIPYPLVSLINVHRYDVPPLDGRGGEGTEADPSVWGSYEGVPQPLVGELTRQGVTMRFEINQQERLTLIL AKGQPRPVLDVPPLPLQDPPPDGLVRDGVLRYALHHDVVHQGAGIFDSLVVDAQCPVPDGGIVLPISGVRLLYRQQTEPA SAPPGPPPPTSPAAPGYVLLLEVPAGHRWLSIDSNGDLRTHRERPLPHTVDSPEDLLTAPEGYVFRTELTSRLDYDPTKD PFSGIH >Mature_965_residues PGEPAEPPWLELRHAPTATAPAGPSAAAQPPGTVTLRLGAHTVPGLIERVDLLDGTTVVSTTRVRPPVDAGTGPVELRLE PWTRHPAAPTVGIFYRRRQQGSRLAAPLTRGSFRLHPSQIKEAKMTQPEATSVDGDVSGGPAMPAAAPAGISATLDFGTS GAVAGVLDVRSVQRVDDGSLPADSLARAESLLGLDQPDPAVDRALNIEMETRDDPLARAEAWKTVFEGPPLRFNHLKTGR HRSSDLVIDGERVDFADEVTGVRLRHRGVKRFLADLDHRLPNTRLSAREVFPRIYQRFADLTRDDVQLAVPVPRIHVTFP TKLPPDRRAAVLDELRRHGLAPLIEMNVDESAAAAGFFLMRRFGADALLGAEAFKLHARCPDGPRAWEDPRLWDAAQQWH ENLLVIDVGGGTTDCALVKTVLTDVTPPAAGDCPGRFHRLAPEVLASGGRLHLGGDLLTLEIFRLLKERLGIATNATVFE GLDDTKGAQRRAVFDALWNAAQAVKHRGLRDHAPRPVEIRIGGDPVTGGTDTGGTDTGDGPVRIPADLVPDRTAATSPVV ITAQELDGIISPIVDQIASLAAGIALGGLSVRGQGGQSVDRVALSGGSMLAEALRYRVEDALRARFDADGLDSTFEVEFD AVHCKTGTALGGMYLNAMADLAPGDPQSQEVIEQLRKGASYFGVDSSRLHVNLAADFALLQTIQGVAAEPIFRRGQPLAG DGDTAYAESRIPYPLVSLINVHRYDVPPLDGRGGEGTEADPSVWGSYEGVPQPLVGELTRQGVTMRFEINQQERLTLILA KGQPRPVLDVPPLPLQDPPPDGLVRDGVLRYALHHDVVHQGAGIFDSLVVDAQCPVPDGGIVLPISGVRLLYRQQTEPAS APPGPPPPTSPAAPGYVLLLEVPAGHRWLSIDSNGDLRTHRERPLPHTVDSPEDLLTAPEGYVFRTELTSRLDYDPTKDP FSGIH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 103622; Mature: 103491
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGEPAEPPWLELRHAPTATAPAGPSAAAQPPGTVTLRLGAHTVPGLIERVDLLDGTTVV CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEE STTRVRPPVDAGTGPVELRLEPWTRHPAAPTVGIFYRRRQQGSRLAAPLTRGSFRLHPSQ EECCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEECCCCCCCEEECHHH IKEAKMTQPEATSVDGDVSGGPAMPAAAPAGISATLDFGTSGAVAGVLDVRSVQRVDDGS HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCC LPADSLARAESLLGLDQPDPAVDRALNIEMETRDDPLARAEAWKTVFEGPPLRFNHLKTG CCHHHHHHHHHHHCCCCCCHHHHHEEEEEEECCCCCHHHHHHHHHHHCCCCCEEECCCCC RHRSSDLVIDGERVDFADEVTGVRLRHRGVKRFLADLDHRLPNTRLSAREVFPRIYQRFA CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH DLTRDDVQLAVPVPRIHVTFPTKLPPDRRAAVLDELRRHGLAPLIEMNVDESAAAAGFFL HCCCCCEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHH MRRFGADALLGAEAFKLHARCPDGPRAWEDPRLWDAAQQWHENLLVIDVGGGTTDCALVK HHHHCCCHHCCCHHEEEECCCCCCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCHHHHHH TVLTDVTPPAAGDCPGRFHRLAPEVLASGGRLHLGGDLLTLEIFRLLKERLGIATNATVF HHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCCCHHC EGLDDTKGAQRRAVFDALWNAAQAVKHRGLRDHAPRPVEIRIGGDPVTGGTDTGGTDTGD CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC GPVRIPADLVPDRTAATSPVVITAQELDGIISPIVDQIASLAAGIALGGLSVRGQGGQSV CCEECCHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCH DRVALSGGSMLAEALRYRVEDALRARFDADGLDSTFEVEFDAVHCKTGTALGGMYLNAMA HHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHH DLAPGDPQSQEVIEQLRKGASYFGVDSSRLHVNLAADFALLQTIQGVAAEPIFRRGQPLA HCCCCCCCHHHHHHHHHCCCCEECCCCCEEEEEEHHHHHHHHHHHHHHHCHHHHCCCCCC GDGDTAYAESRIPYPLVSLINVHRYDVPPLDGRGGEGTEADPSVWGSYEGVPQPLVGELT CCCCCCHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH RQGVTMRFEINQQERLTLILAKGQPRPVLDVPPLPLQDPPPDGLVRDGVLRYALHHDVVH HCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH QGAGIFDSLVVDAQCPVPDGGIVLPISGVRLLYRQQTEPASAPPGPPPPTSPAAPGYVLL HCCCHHHHHEEECCCCCCCCCEEEEECCCEEEHHCCCCCCCCCCCCCCCCCCCCCCEEEE LEVPAGHRWLSIDSNGDLRTHRERPLPHTVDSPEDLLTAPEGYVFRTELTSRLDYDPTKD EECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEEEEEHHHHCCCCCCCC PFSGIH CCCCCC >Mature Secondary Structure PGEPAEPPWLELRHAPTATAPAGPSAAAQPPGTVTLRLGAHTVPGLIERVDLLDGTTVV CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEE STTRVRPPVDAGTGPVELRLEPWTRHPAAPTVGIFYRRRQQGSRLAAPLTRGSFRLHPSQ EECCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEECCCCCCCEEECHHH IKEAKMTQPEATSVDGDVSGGPAMPAAAPAGISATLDFGTSGAVAGVLDVRSVQRVDDGS HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCC LPADSLARAESLLGLDQPDPAVDRALNIEMETRDDPLARAEAWKTVFEGPPLRFNHLKTG CCHHHHHHHHHHHCCCCCCHHHHHEEEEEEECCCCCHHHHHHHHHHHCCCCCEEECCCCC RHRSSDLVIDGERVDFADEVTGVRLRHRGVKRFLADLDHRLPNTRLSAREVFPRIYQRFA CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH DLTRDDVQLAVPVPRIHVTFPTKLPPDRRAAVLDELRRHGLAPLIEMNVDESAAAAGFFL HCCCCCEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHH MRRFGADALLGAEAFKLHARCPDGPRAWEDPRLWDAAQQWHENLLVIDVGGGTTDCALVK HHHHCCCHHCCCHHEEEECCCCCCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCHHHHHH TVLTDVTPPAAGDCPGRFHRLAPEVLASGGRLHLGGDLLTLEIFRLLKERLGIATNATVF HHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCCCHHC EGLDDTKGAQRRAVFDALWNAAQAVKHRGLRDHAPRPVEIRIGGDPVTGGTDTGGTDTGD CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC GPVRIPADLVPDRTAATSPVVITAQELDGIISPIVDQIASLAAGIALGGLSVRGQGGQSV CCEECCHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCH DRVALSGGSMLAEALRYRVEDALRARFDADGLDSTFEVEFDAVHCKTGTALGGMYLNAMA HHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHH DLAPGDPQSQEVIEQLRKGASYFGVDSSRLHVNLAADFALLQTIQGVAAEPIFRRGQPLA HCCCCCCCHHHHHHHHHCCCCEECCCCCEEEEEEHHHHHHHHHHHHHHHCHHHHCCCCCC GDGDTAYAESRIPYPLVSLINVHRYDVPPLDGRGGEGTEADPSVWGSYEGVPQPLVGELT CCCCCCHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH RQGVTMRFEINQQERLTLILAKGQPRPVLDVPPLPLQDPPPDGLVRDGVLRYALHHDVVH HCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH QGAGIFDSLVVDAQCPVPDGGIVLPISGVRLLYRQQTEPASAPPGPPPPTSPAAPGYVLL HCCCHHHHHEEECCCCCCCCCEEEEECCCEEEHHCCCCCCCCCCCCCCCCCCCCCCEEEE LEVPAGHRWLSIDSNGDLRTHRERPLPHTVDSPEDLLTAPEGYVFRTELTSRLDYDPTKD EECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEEEEEHHHHCCCCCCCC PFSGIH CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA