Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is yxjM [H]

Identifier: 158318836

GI number: 158318836

Start: 8686609

End: 8687775

Strand: Direct

Name: yxjM [H]

Synonym: Franean1_7116

Alternate gene names: 158318836

Gene position: 8686609-8687775 (Clockwise)

Preceding gene: 158318835

Following gene: 158318837

Centisome position: 96.71

GC content: 70.18

Gene sequence:

>1167_bases
ATGGCGCTCCGTCCGCCAGTGGCCGATCGGCTGCTGGCGGCGGCCTCGTTCGTGCTCGGCGTCGTCGTCGCGATCACGCT
CGAGGCGGTCGATTTCGACGGCGAGCGAAGCGTAGATCTGTGGGCGATCGCGCTCCTGGGCGCGATGTCGGCGGCGTTAC
TGGCCCGCCGGCGCTGGCCGATCCTCGTCGTCCTCGCGGTCCTCGCAGTGTCGACGCCGTACCACGTCCTCGACTATCCC
CATGAGGCCACGATGCCGGCCTCGCTTGTGGCGGCGTTCACGGCGGCGCGCTGCAGCGAGCCACCGCGGCGGGCCCTCGC
CGCCTTGGTGGCGGTGGCCGCGGTGACCGTGCCGGTCCTCGCCGACGAGGCGTCGGGGGCACCTGACGATGCTCTCCTCG
GCGTCGGCTGGCTGTTCATGGCCTTCTTTGCCGGGCTGGCGGTCCGCTTCCATCAAAACTGGAAGGCCGCCGTCACCGCG
CGGCTTGAGCAGGAGCGTGCCGACGAGGTCGAGCGGCGGGTCGCCGAGGAGCGGGTCCTGATCGCTGCCGAGCTGCACGA
CGTCCTAGCGCACGGCCTCGCGGTCGCGAACGTCCAGGCTTCCGTCGCTGCGCACCTGATCGACCAGCTGCCGAGGCGCG
GGGATGCGTCGCTGCAGGAGCTGTCCAGAACGCTGCATAACCTGTCGGACACGAGCCGGGCCACACTCCATGAGCTGCGT
GCCGTTCTGGACGTGCTGCATGGTGGCGAGGCCGAGCCAACCGAGCCAGTGCCCCACCTCGGCGAGCTGCAGCGTCTGGT
GGAGATGGCCGAGGCGGCTGATATCCGAGTCGACGTGGAGGCTGACGGGCTCCCGGACGAGTTACCGTCGACGGTGTCCG
TCGTGGCCTATCGGATCATCCAGGAGTCGCTCACCAATGTCATTCGACACTCGACGGCCAAGCACGCGACCGTCCGGCTC
GGCCAGAACGGCCACCGGCTGCGGATCGCGGTCGTCGATCACGGGCCCGCGCGACCGAGCTCAACCGTGACACCCGGCTT
CGGGATCGCCGGGATGACAGGGCGAGCACAGGCCGTCGGTGGCGAATTGTCCGCCGGCCCGGGCGAGTCCGGAGGATTCG
AGGTATGGGCCAGCCTGCCGCTGCCGGAGATCTGGCGGGTGCCGTAG

Upstream 100 bases:

>100_bases
GGTTCCTGCACTGACAATGTCGCTGGGTTCGCGGATCTGGTGGCCCAGCAAGCTCTGGCGCGCGGCATAGGACTGTGTCG
ATGACCCTGTGTGAACGATG

Downstream 100 bases:

>100_bases
TGATCCGGATCCTGCTCGCCGACGACCAGACACTGGTGCGCGGCGCGTTCGCGCTGCTGGTTAACTCCGCTGACGACATG
GAGGTCGTCGGGGAGGCCGG

Product: integral membrane sensor signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MALRPPVADRLLAAASFVLGVVVAITLEAVDFDGERSVDLWAIALLGAMSAALLARRRWPILVVLAVLAVSTPYHVLDYP
HEATMPASLVAAFTAARCSEPPRRALAALVAVAAVTVPVLADEASGAPDDALLGVGWLFMAFFAGLAVRFHQNWKAAVTA
RLEQERADEVERRVAEERVLIAAELHDVLAHGLAVANVQASVAAHLIDQLPRRGDASLQELSRTLHNLSDTSRATLHELR
AVLDVLHGGEAEPTEPVPHLGELQRLVEMAEAADIRVDVEADGLPDELPSTVSVVAYRIIQESLTNVIRHSTAKHATVRL
GQNGHRLRIAVVDHGPARPSSTVTPGFGIAGMTGRAQAVGGELSAGPGESGGFEVWASLPLPEIWRVP

Sequences:

>Translated_388_residues
MALRPPVADRLLAAASFVLGVVVAITLEAVDFDGERSVDLWAIALLGAMSAALLARRRWPILVVLAVLAVSTPYHVLDYP
HEATMPASLVAAFTAARCSEPPRRALAALVAVAAVTVPVLADEASGAPDDALLGVGWLFMAFFAGLAVRFHQNWKAAVTA
RLEQERADEVERRVAEERVLIAAELHDVLAHGLAVANVQASVAAHLIDQLPRRGDASLQELSRTLHNLSDTSRATLHELR
AVLDVLHGGEAEPTEPVPHLGELQRLVEMAEAADIRVDVEADGLPDELPSTVSVVAYRIIQESLTNVIRHSTAKHATVRL
GQNGHRLRIAVVDHGPARPSSTVTPGFGIAGMTGRAQAVGGELSAGPGESGGFEVWASLPLPEIWRVP
>Mature_387_residues
ALRPPVADRLLAAASFVLGVVVAITLEAVDFDGERSVDLWAIALLGAMSAALLARRRWPILVVLAVLAVSTPYHVLDYPH
EATMPASLVAAFTAARCSEPPRRALAALVAVAAVTVPVLADEASGAPDDALLGVGWLFMAFFAGLAVRFHQNWKAAVTAR
LEQERADEVERRVAEERVLIAAELHDVLAHGLAVANVQASVAAHLIDQLPRRGDASLQELSRTLHNLSDTSRATLHELRA
VLDVLHGGEAEPTEPVPHLGELQRLVEMAEAADIRVDVEADGLPDELPSTVSVVAYRIIQESLTNVIRHSTAKHATVRLG
QNGHRLRIAVVDHGPARPSSTVTPGFGIAGMTGRAQAVGGELSAGPGESGGFEVWASLPLPEIWRVP

Specific function: Probable member of the two-component regulatory system yxjM/yxjL. May activate yxjL by phosphorylation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1787474, Length=229, Percent_Identity=29.2576419213974, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR011712 [H]

Pfam domain/function: PF02518 HATPase_c; PF07730 HisKA_3 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 41234; Mature: 41102

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALRPPVADRLLAAASFVLGVVVAITLEAVDFDGERSVDLWAIALLGAMSAALLARRRWP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCH
ILVVLAVLAVSTPYHVLDYPHEATMPASLVAAFTAARCSEPPRRALAALVAVAAVTVPVL
HHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
ADEASGAPDDALLGVGWLFMAFFAGLAVRFHQNWKAAVTARLEQERADEVERRVAEERVL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAAELHDVLAHGLAVANVQASVAAHLIDQLPRRGDASLQELSRTLHNLSDTSRATLHELR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH
AVLDVLHGGEAEPTEPVPHLGELQRLVEMAEAADIRVDVEADGLPDELPSTVSVVAYRII
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHH
QESLTNVIRHSTAKHATVRLGQNGHRLRIAVVDHGPARPSSTVTPGFGIAGMTGRAQAVG
HHHHHHHHHHCCCHHHEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHCC
GELSAGPGESGGFEVWASLPLPEIWRVP
CCCCCCCCCCCCEEEEECCCCCHHCCCC
>Mature Secondary Structure 
ALRPPVADRLLAAASFVLGVVVAITLEAVDFDGERSVDLWAIALLGAMSAALLARRRWP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCH
ILVVLAVLAVSTPYHVLDYPHEATMPASLVAAFTAARCSEPPRRALAALVAVAAVTVPVL
HHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
ADEASGAPDDALLGVGWLFMAFFAGLAVRFHQNWKAAVTARLEQERADEVERRVAEERVL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAAELHDVLAHGLAVANVQASVAAHLIDQLPRRGDASLQELSRTLHNLSDTSRATLHELR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH
AVLDVLHGGEAEPTEPVPHLGELQRLVEMAEAADIRVDVEADGLPDELPSTVSVVAYRII
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHH
QESLTNVIRHSTAKHATVRLGQNGHRLRIAVVDHGPARPSSTVTPGFGIAGMTGRAQAVG
HHHHHHHHHHCCCHHHEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHCC
GELSAGPGESGGFEVWASLPLPEIWRVP
CCCCCCCCCCCCEEEEECCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8978088; 8969509; 9384377 [H]