| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is actII-3 [H]
Identifier: 158318835
GI number: 158318835
Start: 8684479
End: 8686578
Strand: Direct
Name: actII-3 [H]
Synonym: Franean1_7115
Alternate gene names: 158318835
Gene position: 8684479-8686578 (Clockwise)
Preceding gene: 158318834
Following gene: 158318836
Centisome position: 96.69
GC content: 67.9
Gene sequence:
>2100_bases ATGATCGCCATGACTTCTGAAGTACGGGCGCCCGACCACTCCGGTGCCGATGCCAGACCGAAGAGATCACGGACCAAGAC CGTGCTGCCGTGGCTCATGCTGGCTGTGTGGATCGGGCTGGTGGTGGGCGGCTACTCACTCGCCGGCAAGCTCGACTCGG TGACCCGCGATGGCCAGGCCGACTACCTGCCGGCCAGCGCCCAGTCGACCAGGGTGCTCCAGGCCGAGGCCGAGCTGCCC GGCGGTGAAAACGGCCTGCTCGTGGTCGTGTACGAACGACCCGACGGCCTCCAGCCGGGCGATCGGGAGGCGGTCGTACG CGGCCAGACCGAGCTGGCGGAGCGATTCGGCAACGACACCGACGCACCGCCCCAGATCGTCGACTCCCCCGACGGCACAG CCCTGATGTACGCGCTGCCGCTCGACCATGAGGCGATCGACGAGGAGGCCGGCGCCACCGCGGAGGCGCGTGACCTTCTC GCCGACCGGCCGAACGGTCTGAACGCATATGTCACCGGTCCGACCGCGCTAGGGGCCGACATGGACGAGATCTTCGATGC CGTCGACTCGACTTTGTTGCTCGCTACTGCCGTAGTGGTGGCGGTCCTGCTGATCCTGACGTATCGCAGTCCGCTCCTGT GGCTGGTCCCGCTCACGGCGGTCGGGGTCGCGGCGATCATGGCGATGGGTGTTGTTTACGCACTCACCCAGATCTTCGAC TTCACCGTGACGAGCATGAGCTCGGCGCTGCTGATCGTCCTGGTCTTCGGCGCGGGCACCGACTACGCCTTGCTTCTCGT GTCTCGCTACCGCGAGGAGCTGCATCACTACGAGCGGCCGATCGACGCGATGCTGGCGGCGCTGCGTGGGGCCGGCCCGG CAATCCTCGCTTCGGCGGCGACGGTGGTAGCCGGCCTGTTGTGCCTGTTGGCCGCGGATCTCAACAGCACCAGCGGTCTC GGCCCGGTGGGTGCGGCGGGCATCGGGTCCGCGCTGCTGGTCATGCTGACGCTCTTCCCGGCCCTGCTGGTGGTGCTCGG GCGCCGGGTCTTTTGGCCGTTCGTGCCGCGACTCGGGGGTGAGGCACACACATCTCGATCTGGGTGGGCTCGGCTCGGCG AGCTGGTCGCGCGCCGCCGCGTCGTCAGCTGGGCGGTGCCGCTGGTGGTCCTGGGCGGTCTCGCGCTGGGCACAGTGGGT GCCAGCGGCTCGCTTCCGCAGCTGGACCAGTTCGCTCGTTCGATACCGGACTCGGTGACCGGGGCGAAGCTGATCGAGGC CCGGTACCCCGACCAGAGCGGTCAGCCGCTCACCGTGGTGAGTCGGCCGGACCAGAGCCGCGAGGTCCTGGCCGCCGTCG AAAGTACGCCGGGGGTTGCCGAAGCCGAGATCGGCCGGGCCAGCGACGACTGGGTGGAGATCTCCGTGATCCCGGTCGAC TCGCCAGAAAGCGCGGGTGAGACGGCAACGATCAAGCGGCTGCGGGAGCACGTGCACCAGGTCGCCGGTGAGGCCGTGCT GGTCGGCGGGCCGAGTGCCGAAAGGCTTGACGAGGCCGAGACCAACAAAAGCGACCGCAATCTGGTGATGCCGCTGATCC TGCTGGTGGTGCTCGCCATCCTCGGGCTGCTGCTGCGGGCGATCGTGGCTCCGCTGGTATTGGTCGCCACCGTCGTGGTG TCGTTCTTCGGCGCCCTCGGACTGTGCAACCTGCTGTTCGACCAGGTGTTCGGTTTCGCCGGGTTGGAGCCGTCGGTGCC CCTGATCGGTTTCCTTTTCCTGGTCGCACTCGGTGTCGACTACAACATCTTCTTGATGACCCGGGTACGTGAGGAAGCCG CCCGGCACGGCACTGTCGATGGCACGAAGCGTGGCCTCGCGGTGACCGGCGGCGTTATCACCTCGGCCGGCGTCGTGCTG GCGGCGACGTTCGCGGTGCTCGCCACGCTGCCGCTCGTCATGCTCGTCGAGATTGGGATACTGGTCGCCGTCGGCGTGCT CATCGACACCTTGCTGGTGCGGTCCATCGTGGTTCCTGCACTGACAATGTCGCTGGGTTCGCGGATCTGGTGGCCCAGCA AGCTCTGGCGCGCGGCATAG
Upstream 100 bases:
>100_bases TCGGCGCCGGTCGCCAGCTCCAGCCGCCCGCCGTACTCCGCGCGGAGTACGGCGAAGTGTCTGCCGTGGCCGGACGCGTC AGCCCCGCCGGCTTGGCAGC
Downstream 100 bases:
>100_bases GACTGTGTCGATGACCCTGTGTGAACGATGATGGCGCTCCGTCCGCCAGTGGCCGATCGGCTGCTGGCGGCGGCCTCGTT CGTGCTCGGCGTCGTCGTCG
Product: MMPL domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 699; Mature: 699
Protein sequence:
>699_residues MIAMTSEVRAPDHSGADARPKRSRTKTVLPWLMLAVWIGLVVGGYSLAGKLDSVTRDGQADYLPASAQSTRVLQAEAELP GGENGLLVVVYERPDGLQPGDREAVVRGQTELAERFGNDTDAPPQIVDSPDGTALMYALPLDHEAIDEEAGATAEARDLL ADRPNGLNAYVTGPTALGADMDEIFDAVDSTLLLATAVVVAVLLILTYRSPLLWLVPLTAVGVAAIMAMGVVYALTQIFD FTVTSMSSALLIVLVFGAGTDYALLLVSRYREELHHYERPIDAMLAALRGAGPAILASAATVVAGLLCLLAADLNSTSGL GPVGAAGIGSALLVMLTLFPALLVVLGRRVFWPFVPRLGGEAHTSRSGWARLGELVARRRVVSWAVPLVVLGGLALGTVG ASGSLPQLDQFARSIPDSVTGAKLIEARYPDQSGQPLTVVSRPDQSREVLAAVESTPGVAEAEIGRASDDWVEISVIPVD SPESAGETATIKRLREHVHQVAGEAVLVGGPSAERLDEAETNKSDRNLVMPLILLVVLAILGLLLRAIVAPLVLVATVVV SFFGALGLCNLLFDQVFGFAGLEPSVPLIGFLFLVALGVDYNIFLMTRVREEAARHGTVDGTKRGLAVTGGVITSAGVVL AATFAVLATLPLVMLVEIGILVAVGVLIDTLLVRSIVVPALTMSLGSRIWWPSKLWRAA
Sequences:
>Translated_699_residues MIAMTSEVRAPDHSGADARPKRSRTKTVLPWLMLAVWIGLVVGGYSLAGKLDSVTRDGQADYLPASAQSTRVLQAEAELP GGENGLLVVVYERPDGLQPGDREAVVRGQTELAERFGNDTDAPPQIVDSPDGTALMYALPLDHEAIDEEAGATAEARDLL ADRPNGLNAYVTGPTALGADMDEIFDAVDSTLLLATAVVVAVLLILTYRSPLLWLVPLTAVGVAAIMAMGVVYALTQIFD FTVTSMSSALLIVLVFGAGTDYALLLVSRYREELHHYERPIDAMLAALRGAGPAILASAATVVAGLLCLLAADLNSTSGL GPVGAAGIGSALLVMLTLFPALLVVLGRRVFWPFVPRLGGEAHTSRSGWARLGELVARRRVVSWAVPLVVLGGLALGTVG ASGSLPQLDQFARSIPDSVTGAKLIEARYPDQSGQPLTVVSRPDQSREVLAAVESTPGVAEAEIGRASDDWVEISVIPVD SPESAGETATIKRLREHVHQVAGEAVLVGGPSAERLDEAETNKSDRNLVMPLILLVVLAILGLLLRAIVAPLVLVATVVV SFFGALGLCNLLFDQVFGFAGLEPSVPLIGFLFLVALGVDYNIFLMTRVREEAARHGTVDGTKRGLAVTGGVITSAGVVL AATFAVLATLPLVMLVEIGILVAVGVLIDTLLVRSIVVPALTMSLGSRIWWPSKLWRAA >Mature_699_residues MIAMTSEVRAPDHSGADARPKRSRTKTVLPWLMLAVWIGLVVGGYSLAGKLDSVTRDGQADYLPASAQSTRVLQAEAELP GGENGLLVVVYERPDGLQPGDREAVVRGQTELAERFGNDTDAPPQIVDSPDGTALMYALPLDHEAIDEEAGATAEARDLL ADRPNGLNAYVTGPTALGADMDEIFDAVDSTLLLATAVVVAVLLILTYRSPLLWLVPLTAVGVAAIMAMGVVYALTQIFD FTVTSMSSALLIVLVFGAGTDYALLLVSRYREELHHYERPIDAMLAALRGAGPAILASAATVVAGLLCLLAADLNSTSGL GPVGAAGIGSALLVMLTLFPALLVVLGRRVFWPFVPRLGGEAHTSRSGWARLGELVARRRVVSWAVPLVVLGGLALGTVG ASGSLPQLDQFARSIPDSVTGAKLIEARYPDQSGQPLTVVSRPDQSREVLAAVESTPGVAEAEIGRASDDWVEISVIPVD SPESAGETATIKRLREHVHQVAGEAVLVGGPSAERLDEAETNKSDRNLVMPLILLVVLAILGLLLRAIVAPLVLVATVVV SFFGALGLCNLLFDQVFGFAGLEPSVPLIGFLFLVALGVDYNIFLMTRVREEAARHGTVDGTKRGLAVTGGVITSAGVVL AATFAVLATLPLVMLVEIGILVAVGVLIDTLLVRSIVVPALTMSLGSRIWWPSKLWRAA
Specific function: Unknown
COG id: COG2409
COG function: function code R; Predicted drug exporters of the RND superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mmpL family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004707 - InterPro: IPR004869 - InterPro: IPR000731 [H]
Pfam domain/function: PF03176 MMPL [H]
EC number: NA
Molecular weight: Translated: 73472; Mature: 73472
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: PS50156 SSD ; PS00539 PYROKININ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAMTSEVRAPDHSGADARPKRSRTKTVLPWLMLAVWIGLVVGGYSLAGKLDSVTRDGQA CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHCCCCCC DYLPASAQSTRVLQAEAELPGGENGLLVVVYERPDGLQPGDREAVVRGQTELAERFGNDT CCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCHHHHCCHHHHHHHCCCCC DAPPQIVDSPDGTALMYALPLDHEAIDEEAGATAEARDLLADRPNGLNAYVTGPTALGAD CCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCHHHHHHHHCCCCCCEEEEECCHHHCCC MDEIFDAVDSTLLLATAVVVAVLLILTYRSPLLWLVPLTAVGVAAIMAMGVVYALTQIFD HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FTVTSMSSALLIVLVFGAGTDYALLLVSRYREELHHYERPIDAMLAALRGAGPAILASAA HHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHH TVVAGLLCLLAADLNSTSGLGPVGAAGIGSALLVMLTLFPALLVVLGRRVFWPFVPRLGG HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EAHTSRSGWARLGELVARRRVVSWAVPLVVLGGLALGTVGASGSLPQLDQFARSIPDSVT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCC GAKLIEARYPDQSGQPLTVVSRPDQSREVLAAVESTPGVAEAEIGRASDDWVEISVIPVD CHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCHHHCCCCCCCEEEEEEEECC SPESAGETATIKRLREHVHQVAGEAVLVGGPSAERLDEAETNKSDRNLVMPLILLVVLAI CCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHH LGLLLRAIVAPLVLVATVVVSFFGALGLCNLLFDQVFGFAGLEPSVPLIGFLFLVALGVD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCC YNIFLMTRVREEAARHGTVDGTKRGLAVTGGVITSAGVVLAATFAVLATLPLVMLVEIGI CEEEEHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVAVGVLIDTLLVRSIVVPALTMSLGSRIWWPSKLWRAA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCC >Mature Secondary Structure MIAMTSEVRAPDHSGADARPKRSRTKTVLPWLMLAVWIGLVVGGYSLAGKLDSVTRDGQA CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHCCCCCC DYLPASAQSTRVLQAEAELPGGENGLLVVVYERPDGLQPGDREAVVRGQTELAERFGNDT CCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCHHHHCCHHHHHHHCCCCC DAPPQIVDSPDGTALMYALPLDHEAIDEEAGATAEARDLLADRPNGLNAYVTGPTALGAD CCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCHHHHHHHHCCCCCCEEEEECCHHHCCC MDEIFDAVDSTLLLATAVVVAVLLILTYRSPLLWLVPLTAVGVAAIMAMGVVYALTQIFD HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FTVTSMSSALLIVLVFGAGTDYALLLVSRYREELHHYERPIDAMLAALRGAGPAILASAA HHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHH TVVAGLLCLLAADLNSTSGLGPVGAAGIGSALLVMLTLFPALLVVLGRRVFWPFVPRLGG HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EAHTSRSGWARLGELVARRRVVSWAVPLVVLGGLALGTVGASGSLPQLDQFARSIPDSVT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCC GAKLIEARYPDQSGQPLTVVSRPDQSREVLAAVESTPGVAEAEIGRASDDWVEISVIPVD CHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCHHHCCCCCCCEEEEEEEECC SPESAGETATIKRLREHVHQVAGEAVLVGGPSAERLDEAETNKSDRNLVMPLILLVVLAI CCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHH LGLLLRAIVAPLVLVATVVVSFFGALGLCNLLFDQVFGFAGLEPSVPLIGFLFLVALGVD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCC YNIFLMTRVREEAARHGTVDGTKRGLAVTGGVITSAGVVLAATFAVLATLPLVMLVEIGI CEEEEHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVAVGVLIDTLLVRSIVVPALTMSLGSRIWWPSKLWRAA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1878971; 12000953 [H]