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The map label for this gene is 158318743

Identifier: 158318743

GI number: 158318743

Start: 8553073

End: 8554074

Strand: Direct

Name: 158318743

Synonym: Franean1_7014

Alternate gene names: NA

Gene position: 8553073-8554074 (Clockwise)

Preceding gene: 158318742

Following gene: 158318746

Centisome position: 95.22

GC content: 67.07

Gene sequence:

>1002_bases
ATGATGGTCAGCTATGTCCATCCGCCTGCTCTATCTGATCTTCGTGCGGGTGTGCGGCTGGCTGGTCCTCCTCGGCCGCT
CGTCGGCGTCGAAGAACATCGAGCTGCTCGTGTTGCGGCACGAGGTCGCGGTGCTGCGCCGCACCCAGCCCAAGCCCCGG
TGGGACTGGGCAGACCGGGCGGTGCTCGCCGTCTGATCACACAGAAGTGGACCCATCCGCGGCGGACGGGACGACCTCCG
GTCAGCCCGGAGATCGCCGCACTGATCGAGCGGCTCGCGACCGAGAACACGACATGGGGATACCAGCGGATCCAAGGCGA
GCTCCTCAAACTCGGCCACCAGGTCAGCGCGTCCACGATCCGCCGGATCCTGAAGACCCTCGGTCTGCCGCCGGCGCCCC
AGCGGCAGACCGACACGACGTGGCGGCAATTCCTGCGCACCCAGGCCGCGACCATGATGGCAGTCGATTTCTTCCATGTG
GACTGCGCCGTGACGCTGCGGCGCCTGTACTGCTTCTTCGTCCTGGAAGTCGCCTCCCGCACCGTCCACATCCTCGGGGT
CACCGCTCACCCGGACGGCCCGTGGACCACCCAACAAGCCCGGAACCTCCTCATGGACCTCGGTGACCGGGCAGCCGACT
TCCAATTCCTGATCCGCGACCGGGCAGGCCAGTTCACCGCCTCGTCCGACGCGGTCCTCGCCGGCACCGGCATCACCACC
GTCAAGATCCCACCCCGAACCCCCCGGGCGAACGCCTACGCGGAACGGTTCGTCCACACGGTCCGGACCGAGGTCACCGA
CAGGATGCTGATCTTCAGTGAACGGCATCTGCGCACCGTCCTGGCCGAGTACGCACGGCACTACAACGGACGGCGACCCC
ACCGCAGCCGCGACCTTCAACCACCCCGACCCGACCACCCCGTCACCGACCTGACCAAGGAACGGATCAAGCGCCAGCCT
GTCCTCGGCGGCCTGATCAACGAATACGAACGAGCCGCCTAA

Upstream 100 bases:

>100_bases
CTGGCAGTCAGCTGACATCCTCGGCCAGCGTGGCCTGTGGGGTGCCAGAAGTCGGCCTGGGCCTGTGACCTGGGATGATG
CGGCGGAGCGGGCTGCCGGC

Downstream 100 bases:

>100_bases
AACCCCAGGTCAGGGCCGGTGACCGAGTTCTGACACCCCACAGGATCACGGGACTTGGGGACGGACGCACAGCTTGCGCA
GCACGCAGATCCGACCCGGG

Product: integrase catalytic subunit

Products: NA

Alternate protein names: Integrase; Transposase; Integrase Catalytic Subunit; LOW QUALITY PROTEIN Integrase; LOW QUALITY PROTEIN Integrase Catalytic Region; Transposase IS; Tranposase; LOW QUALITY PROTEIN Transposase

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MMVSYVHPPALSDLRAGVRLAGPPRPLVGVEEHRAARVAARGRGAAPHPAQAPVGLGRPGGARRLITQKWTHPRRTGRPP
VSPEIAALIERLATENTTWGYQRIQGELLKLGHQVSASTIRRILKTLGLPPAPQRQTDTTWRQFLRTQAATMMAVDFFHV
DCAVTLRRLYCFFVLEVASRTVHILGVTAHPDGPWTTQQARNLLMDLGDRAADFQFLIRDRAGQFTASSDAVLAGTGITT
VKIPPRTPRANAYAERFVHTVRTEVTDRMLIFSERHLRTVLAEYARHYNGRRPHRSRDLQPPRPDHPVTDLTKERIKRQP
VLGGLINEYERAA

Sequences:

>Translated_333_residues
MMVSYVHPPALSDLRAGVRLAGPPRPLVGVEEHRAARVAARGRGAAPHPAQAPVGLGRPGGARRLITQKWTHPRRTGRPP
VSPEIAALIERLATENTTWGYQRIQGELLKLGHQVSASTIRRILKTLGLPPAPQRQTDTTWRQFLRTQAATMMAVDFFHV
DCAVTLRRLYCFFVLEVASRTVHILGVTAHPDGPWTTQQARNLLMDLGDRAADFQFLIRDRAGQFTASSDAVLAGTGITT
VKIPPRTPRANAYAERFVHTVRTEVTDRMLIFSERHLRTVLAEYARHYNGRRPHRSRDLQPPRPDHPVTDLTKERIKRQP
VLGGLINEYERAA
>Mature_333_residues
MMVSYVHPPALSDLRAGVRLAGPPRPLVGVEEHRAARVAARGRGAAPHPAQAPVGLGRPGGARRLITQKWTHPRRTGRPP
VSPEIAALIERLATENTTWGYQRIQGELLKLGHQVSASTIRRILKTLGLPPAPQRQTDTTWRQFLRTQAATMMAVDFFHV
DCAVTLRRLYCFFVLEVASRTVHILGVTAHPDGPWTTQQARNLLMDLGDRAADFQFLIRDRAGQFTASSDAVLAGTGITT
VKIPPRTPRANAYAERFVHTVRTEVTDRMLIFSERHLRTVLAEYARHYNGRRPHRSRDLQPPRPDHPVTDLTKERIKRQP
VLGGLINEYERAA

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37275; Mature: 37275

Theoretical pI: Translated: 11.70; Mature: 11.70

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMVSYVHPPALSDLRAGVRLAGPPRPLVGVEEHRAARVAARGRGAAPHPAQAPVGLGRPG
CCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
GARRLITQKWTHPRRTGRPPVSPEIAALIERLATENTTWGYQRIQGELLKLGHQVSASTI
CCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHH
RRILKTLGLPPAPQRQTDTTWRQFLRTQAATMMAVDFFHVDCAVTLRRLYCFFVLEVASR
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TVHILGVTAHPDGPWTTQQARNLLMDLGDRAADFQFLIRDRAGQFTASSDAVLAGTGITT
EEEEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEECCEEE
VKIPPRTPRANAYAERFVHTVRTEVTDRMLIFSERHLRTVLAEYARHYNGRRPHRSRDLQ
EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PPRPDHPVTDLTKERIKRQPVLGGLINEYERAA
CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCC
>Mature Secondary Structure
MMVSYVHPPALSDLRAGVRLAGPPRPLVGVEEHRAARVAARGRGAAPHPAQAPVGLGRPG
CCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
GARRLITQKWTHPRRTGRPPVSPEIAALIERLATENTTWGYQRIQGELLKLGHQVSASTI
CCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHH
RRILKTLGLPPAPQRQTDTTWRQFLRTQAATMMAVDFFHVDCAVTLRRLYCFFVLEVASR
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TVHILGVTAHPDGPWTTQQARNLLMDLGDRAADFQFLIRDRAGQFTASSDAVLAGTGITT
EEEEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEECCEEE
VKIPPRTPRANAYAERFVHTVRTEVTDRMLIFSERHLRTVLAEYARHYNGRRPHRSRDLQ
EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PPRPDHPVTDLTKERIKRQPVLGGLINEYERAA
CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA