| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is mhqP [H]
Identifier: 158318742
GI number: 158318742
Start: 8552391
End: 8552987
Strand: Direct
Name: mhqP [H]
Synonym: Franean1_7013
Alternate gene names: 158318742
Gene position: 8552391-8552987 (Clockwise)
Preceding gene: 158318740
Following gene: 158318743
Centisome position: 95.22
GC content: 74.37
Gene sequence:
>597_bases ATGAAACTTCTCGAGCGGCACCGGACGCCCCACCGCCCACCACCCGCCGCCCCGGCCCTACCCGCCGCCCCAGCCCCACC CGACGCGTCCCGCCCCGTCGCGCGTCCCGCGGCCGTGTCCGCCGGCGACCTCGGGCTGCTGCTCCTGCGGATGACCTTCG GCCTGCTGCTCGCCGGACATGGCGCGCAGAAGCTCTTCGGCCTGTTCGGCGGCGAGGGCCTCACCGCGACCGGCAGCGGG TTCACCCAGCTTGGTTACCACCCCGGCACCTTCTTCGCCGGGCTGGCCGGCGCAGGCGAACTCCTCGGCGGCCTCGGCCT GGCCGCGGGCCTGCTGACTCCGTTGGCGGCCGCGGCCGTGATCGGCGTGATGATCAATGCGATGATCGTGACCGTGCCGC GGGGACTGTGGGCAACCGACGGCGGCATGGAGTATCCGCTGTGTATCGCGGTGGTCGCGACCGCGGTAGCGGCGATCGGC GCGGGGCGGCTCGCGCTCGACCGCCTCTTCCGGCGGCGCGACGGTGGGCTGCCCGAGATGGCGTTCGCCGTCGGGCTCGG CAGCCTCGGCGCCGCCATCGTCCTGGCAGTCAGCTGA
Upstream 100 bases:
>100_bases TCATCGATGACATGGGCGTGCTGGTACCGGCCCGGCGCCGCGGGCAGAACCCCTAGCGACCAGAACATCACTATGTGTGC CTCTGAATCGAGGTCTCGAC
Downstream 100 bases:
>100_bases CATCCTCGGCCAGCGTGGCCTGTGGGGTGCCAGAAGTCGGCCTGGGCCTGTGACCTGGGATGATGCGGCGGAGCGGGCTG CCGGCATGATGGTCAGCTAT
Product: DoxX family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MKLLERHRTPHRPPPAAPALPAAPAPPDASRPVARPAAVSAGDLGLLLLRMTFGLLLAGHGAQKLFGLFGGEGLTATGSG FTQLGYHPGTFFAGLAGAGELLGGLGLAAGLLTPLAAAAVIGVMINAMIVTVPRGLWATDGGMEYPLCIAVVATAVAAIG AGRLALDRLFRRRDGGLPEMAFAVGLGSLGAAIVLAVS
Sequences:
>Translated_198_residues MKLLERHRTPHRPPPAAPALPAAPAPPDASRPVARPAAVSAGDLGLLLLRMTFGLLLAGHGAQKLFGLFGGEGLTATGSG FTQLGYHPGTFFAGLAGAGELLGGLGLAAGLLTPLAAAAVIGVMINAMIVTVPRGLWATDGGMEYPLCIAVVATAVAAIG AGRLALDRLFRRRDGGLPEMAFAVGLGSLGAAIVLAVS >Mature_198_residues MKLLERHRTPHRPPPAAPALPAAPAPPDASRPVARPAAVSAGDLGLLLLRMTFGLLLAGHGAQKLFGLFGGEGLTATGSG FTQLGYHPGTFFAGLAGAGELLGGLGLAAGLLTPLAAAAVIGVMINAMIVTVPRGLWATDGGMEYPLCIAVVATAVAAIG AGRLALDRLFRRRDGGLPEMAFAVGLGSLGAAIVLAVS
Specific function: Putative oxidoreductase that may contribute to the degradation of aromatic compounds (Potential) [H]
COG id: COG2259
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the doxX family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011637 [H]
Pfam domain/function: PF07681 DoxX [H]
EC number: NA
Molecular weight: Translated: 19758; Mature: 19758
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLERHRTPHRPPPAAPALPAAPAPPDASRPVARPAAVSAGDLGLLLLRMTFGLLLAGH CCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC GAQKLFGLFGGEGLTATGSGFTQLGYHPGTFFAGLAGAGELLGGLGLAAGLLTPLAAAAV CHHHHHHHHCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGVMINAMIVTVPRGLWATDGGMEYPLCIAVVATAVAAIGAGRLALDRLFRRRDGGLPEM HHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHH AFAVGLGSLGAAIVLAVS HHHHHHHHHCCEEEEECC >Mature Secondary Structure MKLLERHRTPHRPPPAAPALPAAPAPPDASRPVARPAAVSAGDLGLLLLRMTFGLLLAGH CCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC GAQKLFGLFGGEGLTATGSGFTQLGYHPGTFFAGLAGAGELLGGLGLAAGLLTPLAAAAV CHHHHHHHHCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGVMINAMIVTVPRGLWATDGGMEYPLCIAVVATAVAAIGAGRLALDRLFRRRDGGLPEM HHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHH AFAVGLGSLGAAIVLAVS HHHHHHHHHCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9341680; 9384377 [H]