| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318740
Identifier: 158318740
GI number: 158318740
Start: 8548709
End: 8549668
Strand: Direct
Name: 158318740
Synonym: Franean1_7011
Alternate gene names: NA
Gene position: 8548709-8549668 (Clockwise)
Preceding gene: 158318739
Following gene: 158318742
Centisome position: 95.18
GC content: 74.38
Gene sequence:
>960_bases ATGACGACACTCACTCTGGTGTTCCTGCTCGCCCTGGCCCTGTTTCCGGCTGTCGTCGGCCTCGCCGGGAGCGGGGCCGC GGCGGGCGCGGCCCGGTACCTCCCGCCGGCGGCGGCGACCGTGCTCCTCACCACATTCGCGGTGACGGTGTCGGTGGCCG TCGAGACAATGCTGTCGCTGTCCGCGTACCTCGGCACGGTTGATCTTTTTCCCGCGGCGCACCCGCACGACTGGTCGACC CCGATCCTGCGCGCGACGCTGCCGATTCCCAACGCGGCCGGCCTGGCCACAGGGGCGCTGGCGGTCATCCTGCTCGGCCG GACCGGCGTCCACCTCGTCCGGGTCGTGGTGGGCGCGCGTCGGACCACAGCCGCGGCCGCGGCGTTGCCCGCGGTGGGCG GACTGGCGATCGTCGACGACACCGCCGCGCACGCCTACGCCGTTCCGGGCCGCAACCGACGCGTCGTCGTCTCCACCGGC ATGCTGCGCCTGCTGACCGGGCCACAGCGTCGGGCCCTGCTCGCGCACGAGCAGGCCCACCTGCGTCACCACCACCACCG CTACGCACAGCTGACCCGCCTCGCCGCCGCGGCCAACCCCCTGACGGCGCTGATCGCCCCCGCCGTCGACCATGCGATCG AGCGGTGGGCGGATGCCGCCGCGGTCCGCGCGGTCGGTGACCCGTCCACGGTGGCCCACGCGCTGGGCCGGGCCGCGCTC GGCCGGCCCGCGGCGCCGCCCCACCGCCCCGGTGCCGCCCACGATCATCCCCACGGACTCGGTGCCGCCCACGATCATGT CGTCGACCGGGTGCATGACCTGCTCGATCCGCCGCTCCGCCAGACCCGGGTGGGTGTCCTGCTGGCGGGCGCGACAATGC TGTGCTGGGCCAGCACCGCCACCGTCGTCCTCTACATCCACGGCGTCATCGAACTGGCCGAAGCCACCGTTGCCCGCTGA
Upstream 100 bases:
>100_bases TGGACGAGGACTCCGAACAGATCCTGCGGGACCTGCTCGCCCGACACCCCGAGCCCGACGAGAAGCCGCCGGGACCGGAC ACCCGGAACCGGAGACCGAG
Downstream 100 bases:
>100_bases TCCGCATTCCTAGAACCGTGGGAGCCGCGCGTGCGCCTGGCGGCCGCGGTCTGGCACCGACGCTCGGACCGTGGTCCTGG AACGCATGTCAGTATGTCTG
Product: peptidase M48 Ste24p
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 319; Mature: 318
Protein sequence:
>319_residues MTTLTLVFLLALALFPAVVGLAGSGAAAGAARYLPPAAATVLLTTFAVTVSVAVETMLSLSAYLGTVDLFPAAHPHDWST PILRATLPIPNAAGLATGALAVILLGRTGVHLVRVVVGARRTTAAAAALPAVGGLAIVDDTAAHAYAVPGRNRRVVVSTG MLRLLTGPQRRALLAHEQAHLRHHHHRYAQLTRLAAAANPLTALIAPAVDHAIERWADAAAVRAVGDPSTVAHALGRAAL GRPAAPPHRPGAAHDHPHGLGAAHDHVVDRVHDLLDPPLRQTRVGVLLAGATMLCWASTATVVLYIHGVIELAEATVAR
Sequences:
>Translated_319_residues MTTLTLVFLLALALFPAVVGLAGSGAAAGAARYLPPAAATVLLTTFAVTVSVAVETMLSLSAYLGTVDLFPAAHPHDWST PILRATLPIPNAAGLATGALAVILLGRTGVHLVRVVVGARRTTAAAAALPAVGGLAIVDDTAAHAYAVPGRNRRVVVSTG MLRLLTGPQRRALLAHEQAHLRHHHHRYAQLTRLAAAANPLTALIAPAVDHAIERWADAAAVRAVGDPSTVAHALGRAAL GRPAAPPHRPGAAHDHPHGLGAAHDHVVDRVHDLLDPPLRQTRVGVLLAGATMLCWASTATVVLYIHGVIELAEATVAR >Mature_318_residues TTLTLVFLLALALFPAVVGLAGSGAAAGAARYLPPAAATVLLTTFAVTVSVAVETMLSLSAYLGTVDLFPAAHPHDWSTP ILRATLPIPNAAGLATGALAVILLGRTGVHLVRVVVGARRTTAAAAALPAVGGLAIVDDTAAHAYAVPGRNRRVVVSTGM LRLLTGPQRRALLAHEQAHLRHHHHRYAQLTRLAAAANPLTALIAPAVDHAIERWADAAAVRAVGDPSTVAHALGRAALG RPAAPPHRPGAAHDHPHGLGAAHDHVVDRVHDLLDPPLRQTRVGVLLAGATMLCWASTATVVLYIHGVIELAEATVAR
Specific function: Unknown
COG id: COG0501
COG function: function code O; Zn-dependent protease with chaperone function
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32876; Mature: 32744
Theoretical pI: Translated: 10.94; Mature: 10.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLTLVFLLALALFPAVVGLAGSGAAAGAARYLPPAAATVLLTTFAVTVSVAVETMLSL CHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH SAYLGTVDLFPAAHPHDWSTPILRATLPIPNAAGLATGALAVILLGRTGVHLVRVVVGAR HHHHCCHHHCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCC RTTAAAAALPAVGGLAIVDDTAAHAYAVPGRNRRVVVSTGMLRLLTGPQRRALLAHEQAH HHHHHHHHHHHCCCEEEEECCCCCEEECCCCCCEEEEECCHHHHHCCCHHHHHHHHHHHH LRHHHHRYAQLTRLAAAANPLTALIAPAVDHAIERWADAAAVRAVGDPSTVAHALGRAAL HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC GRPAAPPHRPGAAHDHPHGLGAAHDHVVDRVHDLLDPPLRQTRVGVLLAGATMLCWASTA CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH TVVLYIHGVIELAEATVAR HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TTLTLVFLLALALFPAVVGLAGSGAAAGAARYLPPAAATVLLTTFAVTVSVAVETMLSL HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH SAYLGTVDLFPAAHPHDWSTPILRATLPIPNAAGLATGALAVILLGRTGVHLVRVVVGAR HHHHCCHHHCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCC RTTAAAAALPAVGGLAIVDDTAAHAYAVPGRNRRVVVSTGMLRLLTGPQRRALLAHEQAH HHHHHHHHHHHCCCEEEEECCCCCEEECCCCCCEEEEECCHHHHHCCCHHHHHHHHHHHH LRHHHHRYAQLTRLAAAANPLTALIAPAVDHAIERWADAAAVRAVGDPSTVAHALGRAAL HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC GRPAAPPHRPGAAHDHPHGLGAAHDHVVDRVHDLLDPPLRQTRVGVLLAGATMLCWASTA CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH TVVLYIHGVIELAEATVAR HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA