| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318739
Identifier: 158318739
GI number: 158318739
Start: 8548284
End: 8548712
Strand: Direct
Name: 158318739
Synonym: Franean1_7010
Alternate gene names: NA
Gene position: 8548284-8548712 (Clockwise)
Preceding gene: 158318735
Following gene: 158318740
Centisome position: 95.17
GC content: 72.03
Gene sequence:
>429_bases GTGGCCGGTCGAGCCCGCCCCCGCCCGAGCGGGGGCCTGGAGAGCGAGGTCGTCGCCTGCCTCGCCGCGGCCGACGGGCC GTTGACCGCGGCGCAGGTCCAGGCCGAACTGGGCGATGACCTGGCCTACACGACTATCCTGACGACTCTGACACGTCTGT ACGCCAAACAGGCCCTGACCCGCACCCCCCGCGGCCGCGCCTACGCCTACCAGCTGGTCGGCAACCTGCCCGAAACCCAG GCCGGGCTCACCGCGCGCCAGATGCAGAAGCTGCTCGACGCCGGCGTCGATCGCGCCACGGTGCTGTCCCGGTTCGTCGA CAGCCTGGACGAGGACTCCGAACAGATCCTGCGGGACCTGCTCGCCCGACACCCCGAGCCCGACGAGAAGCCGCCGGGAC CGGACACCCGGAACCGGAGACCGAGATGA
Upstream 100 bases:
>100_bases GGGCGTGCGGCGGACAGCTTGCCCGCTCTGCGTGATGCCACAATCGCTGGGCGACTCAACACGGCGATGCGCCGCCAGGC AACGAGCGACGGGAGGCACC
Downstream 100 bases:
>100_bases CGACACTCACTCTGGTGTTCCTGCTCGCCCTGGCCCTGTTTCCGGCTGTCGTCGGCCTCGCCGGGAGCGGGGCCGCGGCG GGCGCGGCCCGGTACCTCCC
Product: CopY family transcriptional regulator
Products: NA
Alternate protein names: CopY Family Transcriptional Regulator; Penicillinase Repressor; CopY Family Transcriptional Repressor; Transcriptional Repressor
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MAGRARPRPSGGLESEVVACLAAADGPLTAAQVQAELGDDLAYTTILTTLTRLYAKQALTRTPRGRAYAYQLVGNLPETQ AGLTARQMQKLLDAGVDRATVLSRFVDSLDEDSEQILRDLLARHPEPDEKPPGPDTRNRRPR
Sequences:
>Translated_142_residues MAGRARPRPSGGLESEVVACLAAADGPLTAAQVQAELGDDLAYTTILTTLTRLYAKQALTRTPRGRAYAYQLVGNLPETQ AGLTARQMQKLLDAGVDRATVLSRFVDSLDEDSEQILRDLLARHPEPDEKPPGPDTRNRRPR >Mature_141_residues AGRARPRPSGGLESEVVACLAAADGPLTAAQVQAELGDDLAYTTILTTLTRLYAKQALTRTPRGRAYAYQLVGNLPETQA GLTARQMQKLLDAGVDRATVLSRFVDSLDEDSEQILRDLLARHPEPDEKPPGPDTRNRRPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15465; Mature: 15333
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGRARPRPSGGLESEVVACLAAADGPLTAAQVQAELGDDLAYTTILTTLTRLYAKQALT CCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH RTPRGRAYAYQLVGNLPETQAGLTARQMQKLLDAGVDRATVLSRFVDSLDEDSEQILRDL CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHH LARHPEPDEKPPGPDTRNRRPR HHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AGRARPRPSGGLESEVVACLAAADGPLTAAQVQAELGDDLAYTTILTTLTRLYAKQALT CCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH RTPRGRAYAYQLVGNLPETQAGLTARQMQKLLDAGVDRATVLSRFVDSLDEDSEQILRDL CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHH LARHPEPDEKPPGPDTRNRRPR HHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA