| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318720
Identifier: 158318720
GI number: 158318720
Start: 8513636
End: 8514556
Strand: Reverse
Name: 158318720
Synonym: Franean1_6991
Alternate gene names: NA
Gene position: 8514556-8513636 (Counterclockwise)
Preceding gene: 158318721
Following gene: 158318715
Centisome position: 94.8
GC content: 71.23
Gene sequence:
>921_bases GTGACGACCACCGGCCCGACGGTGGGCCTGATGCTTCCCACGGTGGCGAACCCGGACACGGGCGCGGTCGACACCGCGCG GGTGGTCGAGGCGGCCCGGCGGGCGGAGGTGGCCGGTTTCGACGGCGTCTACATCGGCGATCACCTGCTGCACCCGCATC CGATGCTGGAGTCGGTCGTCACCCTTTCCGTCGTGGCGGCGCGGACCGAGCGGGTTTCGTTCGGGCCGTGCGTGATGCTC ATGGGCCTGCGGAATCCCGTGGCCCTGGCGAAACAGCTCGGAACACTGGCGGCGTTCGCTCCGGGCCGCCTGCGCGTCGG AGTCGGCGTAGGGGGCGAATACCCCGGCGAGTTCGAGGTGGCGGGTGTCGCGCTGCCGGAGCGCGGACGTCGCATGGAGT CGGTTCTCGGCCAGGTGCAGTCGCTGCTGAGATCGGGCGCGCAGCGTCCGGACGTGACAATCGCGCCGGGCGCGCCGGAC GTCCCATTCCTCCTCGCGGGCTGGAAAGAGGTGTCGCTGCGCCGGGCGGCGACGTACGGAGACGGCTGGATCGGTTATCT CCTCGCCCCCGACAGCTTCGCGCGGCGCCGGGCCTTTCTGCTCGAGCATCGGGAGAAGCTGGGGCGGGTCGAGGTCCCTT TCACGACTGGAATGCTCGTCCCGGTACACGTGGATCCGTCGGGTGGTGCCGCGGTGAGCGCCGCGGCCGCGTGGGCGAAG ATCACCGACTCCGAGGCCGGGTTCCCGGCGCGGCTGTTCGCCGCCGGCCGGCCGGGCGAGGTTGTCGAGCAGCTGCACCG CTACTGGGCGGCCGGCTGCACCGAGCTCGTCCTGGCGCCGGCCGATCAGGGCGAGGGCTACCTCGAGCAGGTGATCATGC TGGCTGGGGAGGTACTTCCACAGGTGAAGGCCTTCTCATAG
Upstream 100 bases:
>100_bases CGTCGCGGTCCGCGAGGAGGTCCTGTGGCCCGATCCCGCCGCGTAGCCCGGCCCTTGGCTCGCCCGCTCCCACCGCTGCT CGGCAACGGCCGGTGAGCCG
Downstream 100 bases:
>100_bases GACGCCCCGGGACATCCCAGGGAGCGGCGGCCGCTCAGGTGCTCAGGCGCCGGTAGCGGGCGAGGCGGCGGACCCCGTCC GCGGCGGGGCGACCGGGGCA
Product: luciferase family protein
Products: NA
Alternate protein names: Oxidoreductase; Luciferase-Like Subgroup; Luciferase-Like Monooxygenase Superfamily Protein; Alkanesulfonate Monooxygenase; Dehydrogenase; Flavin-Dependent Oxidoreductase; Luciferase-Like Monooxygenase; Luciferase
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MTTTGPTVGLMLPTVANPDTGAVDTARVVEAARRAEVAGFDGVYIGDHLLHPHPMLESVVTLSVVAARTERVSFGPCVML MGLRNPVALAKQLGTLAAFAPGRLRVGVGVGGEYPGEFEVAGVALPERGRRMESVLGQVQSLLRSGAQRPDVTIAPGAPD VPFLLAGWKEVSLRRAATYGDGWIGYLLAPDSFARRRAFLLEHREKLGRVEVPFTTGMLVPVHVDPSGGAAVSAAAAWAK ITDSEAGFPARLFAAGRPGEVVEQLHRYWAAGCTELVLAPADQGEGYLEQVIMLAGEVLPQVKAFS
Sequences:
>Translated_306_residues MTTTGPTVGLMLPTVANPDTGAVDTARVVEAARRAEVAGFDGVYIGDHLLHPHPMLESVVTLSVVAARTERVSFGPCVML MGLRNPVALAKQLGTLAAFAPGRLRVGVGVGGEYPGEFEVAGVALPERGRRMESVLGQVQSLLRSGAQRPDVTIAPGAPD VPFLLAGWKEVSLRRAATYGDGWIGYLLAPDSFARRRAFLLEHREKLGRVEVPFTTGMLVPVHVDPSGGAAVSAAAAWAK ITDSEAGFPARLFAAGRPGEVVEQLHRYWAAGCTELVLAPADQGEGYLEQVIMLAGEVLPQVKAFS >Mature_305_residues TTTGPTVGLMLPTVANPDTGAVDTARVVEAARRAEVAGFDGVYIGDHLLHPHPMLESVVTLSVVAARTERVSFGPCVMLM GLRNPVALAKQLGTLAAFAPGRLRVGVGVGGEYPGEFEVAGVALPERGRRMESVLGQVQSLLRSGAQRPDVTIAPGAPDV PFLLAGWKEVSLRRAATYGDGWIGYLLAPDSFARRRAFLLEHREKLGRVEVPFTTGMLVPVHVDPSGGAAVSAAAAWAKI TDSEAGFPARLFAAGRPGEVVEQLHRYWAAGCTELVLAPADQGEGYLEQVIMLAGEVLPQVKAFS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32312; Mature: 32180
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTGPTVGLMLPTVANPDTGAVDTARVVEAARRAEVAGFDGVYIGDHLLHPHPMLESVV CCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHH TLSVVAARTERVSFGPCVMLMGLRNPVALAKQLGTLAAFAPGRLRVGVGVGGEYPGEFEV HHHHHHHHHCCCCCCCHHEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEE AGVALPERGRRMESVLGQVQSLLRSGAQRPDVTIAPGAPDVPFLLAGWKEVSLRRAATYG EEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCEEECCHHHHHHHHHHCCC DGWIGYLLAPDSFARRRAFLLEHREKLGRVEVPFTTGMLVPVHVDPSGGAAVSAAAAWAK CCEEEEEECCCHHHHHHHHHHHHHHHCCCEECCEECCEEEEEEECCCCCCHHHHHHHHHH ITDSEAGFPARLFAAGRPGEVVEQLHRYWAAGCTELVLAPADQGEGYLEQVIMLAGEVLP CCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHH QVKAFS HHHCCC >Mature Secondary Structure TTTGPTVGLMLPTVANPDTGAVDTARVVEAARRAEVAGFDGVYIGDHLLHPHPMLESVV CCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHH TLSVVAARTERVSFGPCVMLMGLRNPVALAKQLGTLAAFAPGRLRVGVGVGGEYPGEFEV HHHHHHHHHCCCCCCCHHEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEE AGVALPERGRRMESVLGQVQSLLRSGAQRPDVTIAPGAPDVPFLLAGWKEVSLRRAATYG EEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCEEECCHHHHHHHHHHCCC DGWIGYLLAPDSFARRRAFLLEHREKLGRVEVPFTTGMLVPVHVDPSGGAAVSAAAAWAK CCEEEEEECCCHHHHHHHHHHHHHHHCCCEECCEECCEEEEEEECCCCCCHHHHHHHHHH ITDSEAGFPARLFAAGRPGEVVEQLHRYWAAGCTELVLAPADQGEGYLEQVIMLAGEVLP CCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHH QVKAFS HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA