| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318721
Identifier: 158318721
GI number: 158318721
Start: 8514611
End: 8515312
Strand: Reverse
Name: 158318721
Synonym: Franean1_6992
Alternate gene names: NA
Gene position: 8515312-8514611 (Counterclockwise)
Preceding gene: 158318722
Following gene: 158318720
Centisome position: 94.8
GC content: 69.8
Gene sequence:
>702_bases ATGATCAAGCGGATATTACTGGTCACCCGGGGGTGCGCACCGGACGATTTCGTGCCCGCCTGGCGCGCCGCCATGGGTGC CGCCGCGGCCGCGCCGCCGGACGTCCGGCCCTCCCGGGTAACCGCGGGAATCGTGCTGGACGAGGTCACGCCCGAACCGC GTCATGACGCCGTCGGCCAGGAGTGGTTCGACGACGAGGAGCACCTGAAGCGGTTCGAGTCATGGCTGGCGTCACCGGAG GGCGCAGTGGTCGACGAACTGCTCGGCCGCGCGGTTGAACGGGATGCCAGCGGCATTGTGGTGGCCAGCGAGCACGTGAT GCGCGGTGAGGAATGGCTTTCGCGGCGGCGGCGGGACGGCGGTGAGAGCCTGAAGCACATGGCTCTCGCGACGCGCGCGG CGGGCCTCACCCAGGCGGAGTTCTTCGACCGTTGGCGGAATCGCGCGGGCCTGGTCGGGGCGGTGCCGATTCCCCCGGTG GCCCGCGGGCAGGCATATATGCAGAACCATCCGTTGCCGCGGGACGTGGGCGACTGGCCGTACGACGCCGTGAACGAGGT CTATTTCGACAATCTCGACGACCTGCGCGCGCGGATCGCGTGGTTCGCGGAGAACCTTGCCGGGAACGAGGACGACCTGG TCCGGGAGTCCTGGTTCGTCGCGGTCCGCGAGGAGGTCCTGTGGCCCGATCCCGCCGCGTAG
Upstream 100 bases:
>100_bases GCTGGTCACCGGTTCGGGCGTCGGCGGGCGGCGGGCAGGAGGGCTGGGCGCTGGGTGAAGTGGTCGATCCCGCGGCTCGG TTGCCGACTATAGGAGAGTA
Downstream 100 bases:
>100_bases CCCGGCCCTTGGCTCGCCCGCTCCCACCGCTGCTCGGCAACGGCCGGTGAGCCGGTGACGACCACCGGCCCGACGGTGGG CCTGATGCTTCCCACGGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MIKRILLVTRGCAPDDFVPAWRAAMGAAAAAPPDVRPSRVTAGIVLDEVTPEPRHDAVGQEWFDDEEHLKRFESWLASPE GAVVDELLGRAVERDASGIVVASEHVMRGEEWLSRRRRDGGESLKHMALATRAAGLTQAEFFDRWRNRAGLVGAVPIPPV ARGQAYMQNHPLPRDVGDWPYDAVNEVYFDNLDDLRARIAWFAENLAGNEDDLVRESWFVAVREEVLWPDPAA
Sequences:
>Translated_233_residues MIKRILLVTRGCAPDDFVPAWRAAMGAAAAAPPDVRPSRVTAGIVLDEVTPEPRHDAVGQEWFDDEEHLKRFESWLASPE GAVVDELLGRAVERDASGIVVASEHVMRGEEWLSRRRRDGGESLKHMALATRAAGLTQAEFFDRWRNRAGLVGAVPIPPV ARGQAYMQNHPLPRDVGDWPYDAVNEVYFDNLDDLRARIAWFAENLAGNEDDLVRESWFVAVREEVLWPDPAA >Mature_233_residues MIKRILLVTRGCAPDDFVPAWRAAMGAAAAAPPDVRPSRVTAGIVLDEVTPEPRHDAVGQEWFDDEEHLKRFESWLASPE GAVVDELLGRAVERDASGIVVASEHVMRGEEWLSRRRRDGGESLKHMALATRAAGLTQAEFFDRWRNRAGLVGAVPIPPV ARGQAYMQNHPLPRDVGDWPYDAVNEVYFDNLDDLRARIAWFAENLAGNEDDLVRESWFVAVREEVLWPDPAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26030; Mature: 26030
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKRILLVTRGCAPDDFVPAWRAAMGAAAAAPPDVRPSRVTAGIVLDEVTPEPRHDAVGQ CCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHEEEECCCCCCCCCCCCH EWFDDEEHLKRFESWLASPEGAVVDELLGRAVERDASGIVVASEHVMRGEEWLSRRRRDG HHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEHHHHHCCHHHHHHHHCCH GESLKHMALATRAAGLTQAEFFDRWRNRAGLVGAVPIPPVARGQAYMQNHPLPRDVGDWP HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHCCCCCCCCCCCC YDAVNEVYFDNLDDLRARIAWFAENLAGNEDDLVRESWFVAVREEVLWPDPAA HHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MIKRILLVTRGCAPDDFVPAWRAAMGAAAAAPPDVRPSRVTAGIVLDEVTPEPRHDAVGQ CCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHEEEECCCCCCCCCCCCH EWFDDEEHLKRFESWLASPEGAVVDELLGRAVERDASGIVVASEHVMRGEEWLSRRRRDG HHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEHHHHHCCHHHHHHHHCCH GESLKHMALATRAAGLTQAEFFDRWRNRAGLVGAVPIPPVARGQAYMQNHPLPRDVGDWP HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHCCCCCCCCCCCC YDAVNEVYFDNLDDLRARIAWFAENLAGNEDDLVRESWFVAVREEVLWPDPAA HHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA