Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158318715

Identifier: 158318715

GI number: 158318715

Start: 8506463

End: 8507053

Strand: Reverse

Name: 158318715

Synonym: Franean1_6984

Alternate gene names: NA

Gene position: 8507053-8506463 (Counterclockwise)

Preceding gene: 158318720

Following gene: 158318713

Centisome position: 94.71

GC content: 73.77

Gene sequence:

>591_bases
ATGTGGCAATATCGCACCGCTATGGCTTGGACTCTGCTCCGCCTGGCCGCCTGGGTGGTCGCGACCGCGCTGGCCGTCAC
CCTGTCCTGGTTCGCCGTCAACGGGGTACTCGCGGGCGACACCTTCGCCACGCCGTCGTCAGCCGTCGCCATCGACCCGC
CGGACGTCCCGCCGCTCCCGTCGGTCAACCCGCCCCCGGGGCTGTCGCCGTCCGCGACGTCCACCCTGTCGTCGACCGCG
CTGCCCAGCGCATCCGCCCCGCCGACGTCGCGACCGCGGGCAACGGCCCTCCCGGCCACGGCCGCAGCGTCGCCGTCAAC
CGGCCCCGTGGCCGCGCCGCCGCCCGCGGCCCCCGCACCCGCCGGCGCCGCCACAGCCACCGCACAGAGCTACCAGCTTG
ACGGCGGACGAGTGGTGATCGAGACCACCGACGTCTCGGCCCGCCTGGTGTCCGCGACGCCGGACGTCGGCTGGAAGGTG
CAGGCGTGGCAGGCCGAGGGATGGCTGCGGGTCGACTTCAGCCGCGACGGCAGGACGTCCTCGTGCTTCGTCACCTGGAA
CGGACATCCACCCAGCGTCCAGATCACCTGA

Upstream 100 bases:

>100_bases
GAGTCATCGGCGTGGCTCCTCTCGGGCGGCGGCGGTACGACGTGTCGGTACCTGACGACGTGTCGGTACCTGACGATGCG
TCGATACCCGAACAGGGCGA

Downstream 100 bases:

>100_bases
ACCCCGGCCTGGCCCGCGGCGCCGGGTGCCGCGGGCCAGGCCGGGCGGATGATCAGCCGATGGTCGGCACCGTGCCGCCG
TCGACGGTGTGCTCGGCGCC

Product: secreted protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MWQYRTAMAWTLLRLAAWVVATALAVTLSWFAVNGVLAGDTFATPSSAVAIDPPDVPPLPSVNPPPGLSPSATSTLSSTA
LPSASAPPTSRPRATALPATAAASPSTGPVAAPPPAAPAPAGAATATAQSYQLDGGRVVIETTDVSARLVSATPDVGWKV
QAWQAEGWLRVDFSRDGRTSSCFVTWNGHPPSVQIT

Sequences:

>Translated_196_residues
MWQYRTAMAWTLLRLAAWVVATALAVTLSWFAVNGVLAGDTFATPSSAVAIDPPDVPPLPSVNPPPGLSPSATSTLSSTA
LPSASAPPTSRPRATALPATAAASPSTGPVAAPPPAAPAPAGAATATAQSYQLDGGRVVIETTDVSARLVSATPDVGWKV
QAWQAEGWLRVDFSRDGRTSSCFVTWNGHPPSVQIT
>Mature_196_residues
MWQYRTAMAWTLLRLAAWVVATALAVTLSWFAVNGVLAGDTFATPSSAVAIDPPDVPPLPSVNPPPGLSPSATSTLSSTA
LPSASAPPTSRPRATALPATAAASPSTGPVAAPPPAAPAPAGAATATAQSYQLDGGRVVIETTDVSARLVSATPDVGWKV
QAWQAEGWLRVDFSRDGRTSSCFVTWNGHPPSVQIT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20024; Mature: 20024

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWQYRTAMAWTLLRLAAWVVATALAVTLSWFAVNGVLAGDTFATPSSAVAIDPPDVPPLP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCEEEECCCCCCCCC
SVNPPPGLSPSATSTLSSTALPSASAPPTSRPRATALPATAAASPSTGPVAAPPPAAPAP
CCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AGAATATAQSYQLDGGRVVIETTDVSARLVSATPDVGWKVQAWQAEGWLRVDFSRDGRTS
CCCCCCCCCEEEECCCEEEEEECCCCEEEEECCCCCCEEEEEEECCCEEEEEECCCCCCE
SCFVTWNGHPPSVQIT
EEEEEECCCCCEEEEC
>Mature Secondary Structure
MWQYRTAMAWTLLRLAAWVVATALAVTLSWFAVNGVLAGDTFATPSSAVAIDPPDVPPLP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCEEEECCCCCCCCC
SVNPPPGLSPSATSTLSSTALPSASAPPTSRPRATALPATAAASPSTGPVAAPPPAAPAP
CCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AGAATATAQSYQLDGGRVVIETTDVSARLVSATPDVGWKVQAWQAEGWLRVDFSRDGRTS
CCCCCCCCCEEEECCCEEEEEECCCCEEEEECCCCCCEEEEEEECCCEEEEEECCCCCCE
SCFVTWNGHPPSVQIT
EEEEEECCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA