| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158318713
Identifier: 158318713
GI number: 158318713
Start: 8504659
End: 8505471
Strand: Reverse
Name: 158318713
Synonym: Franean1_6982
Alternate gene names: NA
Gene position: 8505471-8504659 (Counterclockwise)
Preceding gene: 158318715
Following gene: 158318712
Centisome position: 94.69
GC content: 74.29
Gene sequence:
>813_bases ATGCGGCCAGGACTGACCATCGGCGAGTTCGCGCAGCTGACACACCTGAGCGTGCGGACGCTGCGCCGCTACCACGACAG CGGCCTGCTGGAGCCCTCGTCGGTCGACCCGCACAGCGGCTACCGGTACTACACCGCCGAGCAGATCCCGTCCGCCCAGG TGATCCACCGGCTGCGGGAGCTGGGCATGCCGCTGGCCGACGTCGCCCGGATCCTCGCCAACGAGGACCCGGGCGCGCGG GCCGAGCTGGTCGCCGGACATCTCCAGCGGCTGGAGGCCGAGCTCGACCGCACCCGGGCCGCCGTCGCCTCGCTGCGCCA GCTGCTGCGGCCGGACGTCGCGGAGCTGGAGGTACGGCTGCGTTCCGTCCCGGCCCGGACCGTAGCCGCGATCAGCGGCA CCGTCGACCACGACGATGTCCTGGCGTGGTACGCCGAGGCGATGACCGAGCTCGACGCGGCCCTGGCCGGGCGCGAACGA CTCGGCCCGCCCGGCGGCTGCTTCGACAACGAGCTGTTCACCGCCGGCCGTGGCATGGTTCTGGTCCACCGGCCGTCCGC CGACCCACCGACGCGGGGCCGCGTCACCCCGCGAACCCTGCCGGCCGTCGAGCTGGCCACCGCCGTCCACCACGGCGCCC ACGACGACATCGACGTCACCTACGGCCGGCTCGGCGCCTGGGTGGTCGACCACGCCCTCGCCGTCGACGGCCCCGTCCAC GAGACCTACCTGACCGGCCCGCGCGACGATCCCGCGCCGCGGTCCTGGCGCACCGAGATCGGCTGGCCCATCTTTCGCCT CGCGCCGTCCTGA
Upstream 100 bases:
>100_bases TCGAGCCTCCCGCCGGGAGAGGGTCAAACCACGAGCGGCGGCCGTCCGGCCGTCCGGCCGCCGCTTGGCCCGCTCTCCGG CGAAGGTGCACAGTGCGGGG
Downstream 100 bases:
>100_bases CCACGGCGGGACGGCGTGCCCGCAGCCCGGGCCGGTCAGATCCCGGTCTGCCCAGGCCCCGTCGGCGGCGGTCCGGCCCC CGCCCTCCGTCGCCGCTGGT
Product: MerR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MerR Family; Transcriptional Regulator; Magnesium Or Manganese-Dependent Protein Phosphatase; Regulatory Protein; MerR-Family Transcriptional Regulator; Protein Serine/Threonine Phosphatase; Phosphoprotein Phosphatase; DNA Polymerase III Beta Subunit; Multidrug ABC Transporter; DNA Polymerase III Subunit Beta; DNA Polymerase III Beta Chain; Transcription Regulator Of Multidrug-Efflux Transporter; Regulatory Protein MerR; Protein Phosphatase; MerR-Family Protein Transcriptional Regulator; Multidrug-Efflux Transporter Regulator
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MRPGLTIGEFAQLTHLSVRTLRRYHDSGLLEPSSVDPHSGYRYYTAEQIPSAQVIHRLRELGMPLADVARILANEDPGAR AELVAGHLQRLEAELDRTRAAVASLRQLLRPDVAELEVRLRSVPARTVAAISGTVDHDDVLAWYAEAMTELDAALAGRER LGPPGGCFDNELFTAGRGMVLVHRPSADPPTRGRVTPRTLPAVELATAVHHGAHDDIDVTYGRLGAWVVDHALAVDGPVH ETYLTGPRDDPAPRSWRTEIGWPIFRLAPS
Sequences:
>Translated_270_residues MRPGLTIGEFAQLTHLSVRTLRRYHDSGLLEPSSVDPHSGYRYYTAEQIPSAQVIHRLRELGMPLADVARILANEDPGAR AELVAGHLQRLEAELDRTRAAVASLRQLLRPDVAELEVRLRSVPARTVAAISGTVDHDDVLAWYAEAMTELDAALAGRER LGPPGGCFDNELFTAGRGMVLVHRPSADPPTRGRVTPRTLPAVELATAVHHGAHDDIDVTYGRLGAWVVDHALAVDGPVH ETYLTGPRDDPAPRSWRTEIGWPIFRLAPS >Mature_270_residues MRPGLTIGEFAQLTHLSVRTLRRYHDSGLLEPSSVDPHSGYRYYTAEQIPSAQVIHRLRELGMPLADVARILANEDPGAR AELVAGHLQRLEAELDRTRAAVASLRQLLRPDVAELEVRLRSVPARTVAAISGTVDHDDVLAWYAEAMTELDAALAGRER LGPPGGCFDNELFTAGRGMVLVHRPSADPPTRGRVTPRTLPAVELATAVHHGAHDDIDVTYGRLGAWVVDHALAVDGPVH ETYLTGPRDDPAPRSWRTEIGWPIFRLAPS
Specific function: Unknown
COG id: COG0789
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29560; Mature: 29560
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: PS50937 HTH_MERR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPGLTIGEFAQLTHLSVRTLRRYHDSGLLEPSSVDPHSGYRYYTAEQIPSAQVIHRLRE CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHCCHHHHHHHHHH LGMPLADVARILANEDPGARAELVAGHLQRLEAELDRTRAAVASLRQLLRPDVAELEVRL HCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH RSVPARTVAAISGTVDHDDVLAWYAEAMTELDAALAGRERLGPPGGCFDNELFTAGRGMV HHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCEE LVHRPSADPPTRGRVTPRTLPAVELATAVHHGAHDDIDVTYGRLGAWVVDHALAVDGPVH EEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC ETYLTGPRDDPAPRSWRTEIGWPIFRLAPS HHEECCCCCCCCCCCCCHHCCCEEEEECCC >Mature Secondary Structure MRPGLTIGEFAQLTHLSVRTLRRYHDSGLLEPSSVDPHSGYRYYTAEQIPSAQVIHRLRE CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHCCHHHHHHHHHH LGMPLADVARILANEDPGARAELVAGHLQRLEAELDRTRAAVASLRQLLRPDVAELEVRL HCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH RSVPARTVAAISGTVDHDDVLAWYAEAMTELDAALAGRERLGPPGGCFDNELFTAGRGMV HHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCEE LVHRPSADPPTRGRVTPRTLPAVELATAVHHGAHDDIDVTYGRLGAWVVDHALAVDGPVH EEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC ETYLTGPRDDPAPRSWRTEIGWPIFRLAPS HHEECCCCCCCCCCCCCHHCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA