| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is ppsA [H]
Identifier: 158318673
GI number: 158318673
Start: 8457092
End: 8459524
Strand: Reverse
Name: ppsA [H]
Synonym: Franean1_6941
Alternate gene names: 158318673
Gene position: 8459524-8457092 (Counterclockwise)
Preceding gene: 158318674
Following gene: 158318671
Centisome position: 94.18
GC content: 72.09
Gene sequence:
>2433_bases GTGAGCGAGCGTCGGTGGATCGCGTGGTTCAAGGAGATCGGCGCGGACGACGTCGACCAGGCCGGGGGCAAGGGCGCGAA CCTCGGAGAGCTGACCCGCGCCGGGCTGCCCGTGCCACCGGGATTCGTGATCACGGTGTCCGCGTACCTGGACGTCGTCG ACGCGGCCTGGATGCGCTCGGAGATCGCCGCCCGCGCCTCGGACATCGACCCTGACGACCATGCGCAGCTCGAACAGGTC GCCGGGGAGTTACGGGCGCACATAGTCGCGGCGCCCGTCCCGGAGTCGTTGGGCCGCGCGATCTCGGAGGCATACCGGGA ACTGGGCGGTGGCTCGGTGGCAGTGCGGTCGTCGGCGACGGCCGAGGACGCGGCCGGGACGTCCTTCGCGGGCATGAACA GCACGTTCACCAACGTCTCCGGCGAGACGGAACTCCTCGCGCGGGTTCGCGAGTGCTGGGCCTCGCTGTATGGGCCGCGA GCCGTCGCCTACCGGGCCAGCCGCCACATGGTGGCCGAACCGGAGACCGCGGTCGTGGTCCAGCGGATGGTCGACGCGGA GCGGTCGGGCGTGATGTTCTCGGTCGACCCGATCACCGGTGACAGGTCCCGCATCGTGATCGAAGCGGCCTTCGGGCTCG GCGAGGTCGTCGTCGGCGGCGAGGTCATCCCGGACACCTACGTCGTGGACAAGGACGGCCCGCGGCTGGTCGACGTCCGG ACCGGCGCGCAGACCCATCAGATCATCCGTGGCGCAGACGGCCACGACCTGCTCGTGGACCTGCTTCCGACGGAGGGACG CCACCGGATTCTCACCGAGGACGAGGTACTGGACCTGGCGCGGCTGGCTCTGCGCGTCGAGGCGCACTACGGCGAGCCGC AGGACGTCGAATGGGCGATCGAGGGACACCGGACACATCTCGTGCAGTCCCGCCCCGTCACGACCGGCGGGGCGGCACCG GTCACGACCGCACCCCGGCCCACGAGAATCGAGTCGTCCGAGAGGACCGGCCCGTCCGAGAGGACCGGCAGGAGCGAGCC CTCCGACACTGTGCTGCTCACCGGCCTCGGGGGCGCGCCGGGGCGGGCGGCCGGCCGGGTCCGCGTCCTCACCTCACCCG GCGAGGGCGCGGCGTTCGCGACCGGGGAGGTCCTGGTCGCCGCGATGACCTCCCCGGACTGGGTGCCCGTCATCCGCCGC GCCGCCGCGGTGGTCACCGACAGCGGCGGGGTGACCTGCCATGCCGCGATCGTCGCCCGCGAGCTGGGCGTGCCCTGCGT GGTCGGGACGAGCAGCGCGACATCCACGCTGCGCACCGGCGACACGGTCGTCGTCGACGGCAGCCGCGGGGTGGTCGAGA AGGACGCGGACATGTGGGAGACCCCGCGGGCACTGGCCAGTCCGGGGCGAGCCATGGTGAAGGCCATCCCGTCACCCGCG GTCGCGATCGAGGTCGCGCCCGTCGTCCCGGCGGGCCAGGCGCCGAACCCGGTGGTTCCGGTGGCTGTCGAGCCGACCGC CACCAGGCTCTATGTGAATCTTGCCGTCGCCGACCACGTGGAGCAGGTCGCGGCACTGCCTGTCGCGGGCGTGGGCCTGC TGCGGGCGGAGCTCCTCCTGGTCGACGCGCTTGGTGGGACGCATCCCCGCCATCTGCTGGAGCAGGGCGGCCGTGCGGAG TTCGTGGAACGGATGGCCGCCTCCGTCGAGCGGATCACCCGCGCGTTCGCGCCCCGGCCGGTGATCTACCGGGCGACGGA CTTCCGCACCAACGAGTTCCGCGGGCTTACCGGTGGCGACCGTTTCGAACCGGTCGAGGCGAACCCGATGATCGGCTACC GGGGCTGCTTCCGCTACGTCCGTGATCCCGCCGTGTTCGACGCCGAGCTGGAGGTGCTGGCCGTCGTGCGGGAACGCACG CCGAACCTGCACCTGATGATTCCGTTCGTGCGGACCGGCTGGGAGCTCGAGGCCTGCCTGAAGGCGGTGGACGCCAGTCC GCTCGGTGACCATCGGGACATGCTCCGCTGGGTGATGGCCGAGGTGCCCTCGGCCGCCTACTGGATCCCCGCCTACGCCC GGCTCGGGATCGACGGGGTCTCCATCGGCTCCAACGACCTGACCCAGCTCGTGCTCGGTGTCGACCGGGACTCCGAGACC TGCGCCGAGCTGTTCGACGAGGCGGACCCGGCGGTGCTCGACACCATCGCCCGCATCATCACGGCATGCCGGGAGAACGG TCTCACCTCGTCGCTGTGCGGGCAGGCCCCCTCGACCAGGCCCGACTACGCCGAGCGGCTCGTCGAGCTCGGCATCACCT CGGTCTCGGTCGATCCAGACGCGGTGGGTGCCGCGGCGTGGTCGATCGCCGCCGCGGAGCGCCGCATCCTCCTCGACGCG GCCCGGACCGGGATGGCGTCAGGGCGGGGCTGA
Upstream 100 bases:
>100_bases TGCTGCTGCGGCGGCTCGTGCGCGACGTCCCCGGGGTGCTGGGCCTGGAGATCGCACAACCGGTCGGCGTGGCCGGCGCG AGGGGCGAGGAGGTCGACCA
Downstream 100 bases:
>100_bases CCTCGGAGGCCAGCGGTGATCGCGGGCCCGGGGAAGCGATGCGAGCGGGGGGATCAGGCCGGCAGCTCCGATCCTTCCGC CCGCCCGGCATCCCTTCCGT
Product: pyruvate phosphate dikinase
Products: NA
Alternate protein names: PEP synthase; Pyruvate, water dikinase [H]
Number of amino acids: Translated: 810; Mature: 809
Protein sequence:
>810_residues MSERRWIAWFKEIGADDVDQAGGKGANLGELTRAGLPVPPGFVITVSAYLDVVDAAWMRSEIAARASDIDPDDHAQLEQV AGELRAHIVAAPVPESLGRAISEAYRELGGGSVAVRSSATAEDAAGTSFAGMNSTFTNVSGETELLARVRECWASLYGPR AVAYRASRHMVAEPETAVVVQRMVDAERSGVMFSVDPITGDRSRIVIEAAFGLGEVVVGGEVIPDTYVVDKDGPRLVDVR TGAQTHQIIRGADGHDLLVDLLPTEGRHRILTEDEVLDLARLALRVEAHYGEPQDVEWAIEGHRTHLVQSRPVTTGGAAP VTTAPRPTRIESSERTGPSERTGRSEPSDTVLLTGLGGAPGRAAGRVRVLTSPGEGAAFATGEVLVAAMTSPDWVPVIRR AAAVVTDSGGVTCHAAIVARELGVPCVVGTSSATSTLRTGDTVVVDGSRGVVEKDADMWETPRALASPGRAMVKAIPSPA VAIEVAPVVPAGQAPNPVVPVAVEPTATRLYVNLAVADHVEQVAALPVAGVGLLRAELLLVDALGGTHPRHLLEQGGRAE FVERMAASVERITRAFAPRPVIYRATDFRTNEFRGLTGGDRFEPVEANPMIGYRGCFRYVRDPAVFDAELEVLAVVRERT PNLHLMIPFVRTGWELEACLKAVDASPLGDHRDMLRWVMAEVPSAAYWIPAYARLGIDGVSIGSNDLTQLVLGVDRDSET CAELFDEADPAVLDTIARIITACRENGLTSSLCGQAPSTRPDYAERLVELGITSVSVDPDAVGAAAWSIAAAERRILLDA ARTGMASGRG
Sequences:
>Translated_810_residues MSERRWIAWFKEIGADDVDQAGGKGANLGELTRAGLPVPPGFVITVSAYLDVVDAAWMRSEIAARASDIDPDDHAQLEQV AGELRAHIVAAPVPESLGRAISEAYRELGGGSVAVRSSATAEDAAGTSFAGMNSTFTNVSGETELLARVRECWASLYGPR AVAYRASRHMVAEPETAVVVQRMVDAERSGVMFSVDPITGDRSRIVIEAAFGLGEVVVGGEVIPDTYVVDKDGPRLVDVR TGAQTHQIIRGADGHDLLVDLLPTEGRHRILTEDEVLDLARLALRVEAHYGEPQDVEWAIEGHRTHLVQSRPVTTGGAAP VTTAPRPTRIESSERTGPSERTGRSEPSDTVLLTGLGGAPGRAAGRVRVLTSPGEGAAFATGEVLVAAMTSPDWVPVIRR AAAVVTDSGGVTCHAAIVARELGVPCVVGTSSATSTLRTGDTVVVDGSRGVVEKDADMWETPRALASPGRAMVKAIPSPA VAIEVAPVVPAGQAPNPVVPVAVEPTATRLYVNLAVADHVEQVAALPVAGVGLLRAELLLVDALGGTHPRHLLEQGGRAE FVERMAASVERITRAFAPRPVIYRATDFRTNEFRGLTGGDRFEPVEANPMIGYRGCFRYVRDPAVFDAELEVLAVVRERT PNLHLMIPFVRTGWELEACLKAVDASPLGDHRDMLRWVMAEVPSAAYWIPAYARLGIDGVSIGSNDLTQLVLGVDRDSET CAELFDEADPAVLDTIARIITACRENGLTSSLCGQAPSTRPDYAERLVELGITSVSVDPDAVGAAAWSIAAAERRILLDA ARTGMASGRG >Mature_809_residues SERRWIAWFKEIGADDVDQAGGKGANLGELTRAGLPVPPGFVITVSAYLDVVDAAWMRSEIAARASDIDPDDHAQLEQVA GELRAHIVAAPVPESLGRAISEAYRELGGGSVAVRSSATAEDAAGTSFAGMNSTFTNVSGETELLARVRECWASLYGPRA VAYRASRHMVAEPETAVVVQRMVDAERSGVMFSVDPITGDRSRIVIEAAFGLGEVVVGGEVIPDTYVVDKDGPRLVDVRT GAQTHQIIRGADGHDLLVDLLPTEGRHRILTEDEVLDLARLALRVEAHYGEPQDVEWAIEGHRTHLVQSRPVTTGGAAPV TTAPRPTRIESSERTGPSERTGRSEPSDTVLLTGLGGAPGRAAGRVRVLTSPGEGAAFATGEVLVAAMTSPDWVPVIRRA AAVVTDSGGVTCHAAIVARELGVPCVVGTSSATSTLRTGDTVVVDGSRGVVEKDADMWETPRALASPGRAMVKAIPSPAV AIEVAPVVPAGQAPNPVVPVAVEPTATRLYVNLAVADHVEQVAALPVAGVGLLRAELLLVDALGGTHPRHLLEQGGRAEF VERMAASVERITRAFAPRPVIYRATDFRTNEFRGLTGGDRFEPVEANPMIGYRGCFRYVRDPAVFDAELEVLAVVRERTP NLHLMIPFVRTGWELEACLKAVDASPLGDHRDMLRWVMAEVPSAAYWIPAYARLGIDGVSIGSNDLTQLVLGVDRDSETC AELFDEADPAVLDTIARIITACRENGLTSSLCGQAPSTRPDYAERLVELGITSVSVDPDAVGAAAWSIAAAERRILLDAA RTGMASGRG
Specific function: Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate [H]
COG id: COG0574
COG function: function code G; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEP-utilizing enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1787994, Length=842, Percent_Identity=35.3919239904988, Blast_Score=430, Evalue=1e-121, Organism=Escherichia coli, GI1789193, Length=412, Percent_Identity=25.4854368932039, Blast_Score=112, Evalue=1e-25, Organism=Escherichia coli, GI1788756, Length=394, Percent_Identity=25.6345177664975, Blast_Score=99, Evalue=8e-22, Organism=Escherichia coli, GI48994992, Length=370, Percent_Identity=27.027027027027, Blast_Score=93, Evalue=8e-20, Organism=Escherichia coli, GI1788726, Length=239, Percent_Identity=27.6150627615063, Blast_Score=84, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17564524, Length=308, Percent_Identity=28.2467532467532, Blast_Score=113, Evalue=5e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR008279 - InterPro: IPR006319 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR002192 - InterPro: IPR015813 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF02896 PEP-utilizers_C; PF01326 PPDK_N [H]
EC number: =2.7.9.2 [H]
Molecular weight: Translated: 85884; Mature: 85753
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS00370 PEP_ENZYMES_PHOS_SITE ; PS00742 PEP_ENZYMES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSERRWIAWFKEIGADDVDQAGGKGANLGELTRAGLPVPPGFVITVSAYLDVVDAAWMRS CCCCHHHHHHHHCCCCCHHHCCCCCCCHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHH EIAARASDIDPDDHAQLEQVAGELRAHIVAAPVPESLGRAISEAYRELGGGSVAVRSSAT HHHHHHCCCCCCHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCCC AEDAAGTSFAGMNSTFTNVSGETELLARVRECWASLYGPRAVAYRASRHMVAEPETAVVV CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHEEEHHCCCCCCCCHHHHHH QRMVDAERSGVMFSVDPITGDRSRIVIEAAFGLGEVVVGGEVIPDTYVVDKDGPRLVDVR HHHHHHHHCCEEEEECCCCCCCCEEEEEEECCCCEEEECCEECCCCEEEECCCCEEEEEE TGAQTHQIIRGADGHDLLVDLLPTEGRHRILTEDEVLDLARLALRVEAHYGEPQDVEWAI CCCHHHHHHCCCCCCEEEEEECCCCCCCEECCHHHHHHHHHHHHHHEECCCCCCCCEEEE EGHRTHLVQSRPVTTGGAAPVTTAPRPTRIESSERTGPSERTGRSEPSDTVLLTGLGGAP CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC GRAAGRVRVLTSPGEGAAFATGEVLVAAMTSPDWVPVIRRAAAVVTDSGGVTCHAAIVAR CCCCCEEEEEECCCCCCEEECCCEEEEEECCCCHHHHHHHHHHEEECCCCCEEHHHHHHH ELGVPCVVGTSSATSTLRTGDTVVVDGSRGVVEKDADMWETPRALASPGRAMVKAIPSPA HCCCCEEEECCCCCCCEECCCEEEEECCCCCCCCCCHHHCCCHHHHCCCHHHHHHCCCCC VAIEVAPVVPAGQAPNPVVPVAVEPTATRLYVNLAVADHVEQVAALPVAGVGLLRAELLL EEEEEECCCCCCCCCCCEEEEEECCCCEEEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHE VDALGGTHPRHLLEQGGRAEFVERMAASVERITRAFAPRPVIYRATDFRTNEFRGLTGGD EECCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCC RFEPVEANPMIGYRGCFRYVRDPAVFDAELEVLAVVRERTPNLHLMIPFVRTGWELEACL CCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEEHHHCCCCHHHHH KAVDASPLGDHRDMLRWVMAEVPSAAYWIPAYARLGIDGVSIGSNDLTQLVLGVDRDSET HHHCCCCCCCHHHHHHHHHHHCCCCEEEHHHHHHCCCCCEECCCHHHHHHHEECCCCHHH CAELFDEADPAVLDTIARIITACRENGLTSSLCGQAPSTRPDYAERLVELGITSVSVDPD HHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHCCCEEECCCC AVGAAAWSIAAAERRILLDAARTGMASGRG HHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SERRWIAWFKEIGADDVDQAGGKGANLGELTRAGLPVPPGFVITVSAYLDVVDAAWMRS CCCHHHHHHHHCCCCCHHHCCCCCCCHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHH EIAARASDIDPDDHAQLEQVAGELRAHIVAAPVPESLGRAISEAYRELGGGSVAVRSSAT HHHHHHCCCCCCHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCCC AEDAAGTSFAGMNSTFTNVSGETELLARVRECWASLYGPRAVAYRASRHMVAEPETAVVV CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHEEEHHCCCCCCCCHHHHHH QRMVDAERSGVMFSVDPITGDRSRIVIEAAFGLGEVVVGGEVIPDTYVVDKDGPRLVDVR HHHHHHHHCCEEEEECCCCCCCCEEEEEEECCCCEEEECCEECCCCEEEECCCCEEEEEE TGAQTHQIIRGADGHDLLVDLLPTEGRHRILTEDEVLDLARLALRVEAHYGEPQDVEWAI CCCHHHHHHCCCCCCEEEEEECCCCCCCEECCHHHHHHHHHHHHHHEECCCCCCCCEEEE EGHRTHLVQSRPVTTGGAAPVTTAPRPTRIESSERTGPSERTGRSEPSDTVLLTGLGGAP CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC GRAAGRVRVLTSPGEGAAFATGEVLVAAMTSPDWVPVIRRAAAVVTDSGGVTCHAAIVAR CCCCCEEEEEECCCCCCEEECCCEEEEEECCCCHHHHHHHHHHEEECCCCCEEHHHHHHH ELGVPCVVGTSSATSTLRTGDTVVVDGSRGVVEKDADMWETPRALASPGRAMVKAIPSPA HCCCCEEEECCCCCCCEECCCEEEEECCCCCCCCCCHHHCCCHHHHCCCHHHHHHCCCCC VAIEVAPVVPAGQAPNPVVPVAVEPTATRLYVNLAVADHVEQVAALPVAGVGLLRAELLL EEEEEECCCCCCCCCCCEEEEEECCCCEEEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHE VDALGGTHPRHLLEQGGRAEFVERMAASVERITRAFAPRPVIYRATDFRTNEFRGLTGGD EECCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCC RFEPVEANPMIGYRGCFRYVRDPAVFDAELEVLAVVRERTPNLHLMIPFVRTGWELEACL CCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEEHHHCCCCHHHHH KAVDASPLGDHRDMLRWVMAEVPSAAYWIPAYARLGIDGVSIGSNDLTQLVLGVDRDSET HHHCCCCCCCHHHHHHHHHHHCCCCEEEHHHHHHCCCCCEECCCHHHHHHHEECCCCHHH CAELFDEADPAVLDTIARIITACRENGLTSSLCGQAPSTRPDYAERLVELGITSVSVDPD HHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHCCCEEECCCC AVGAAAWSIAAAERRILLDAARTGMASGRG HHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7805870 [H]