| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318671
Identifier: 158318671
GI number: 158318671
Start: 8454241
End: 8454954
Strand: Reverse
Name: 158318671
Synonym: Franean1_6939
Alternate gene names: NA
Gene position: 8454954-8454241 (Counterclockwise)
Preceding gene: 158318673
Following gene: 158318667
Centisome position: 94.13
GC content: 75.35
Gene sequence:
>714_bases ATGAACCGACTGACGCAGAGCCCGCCGGCACGACGCGGGGCGGGCCGTCGACGGGTCGGGACACTGGCGCTGGCGGCCGG TGTGCTGGCGCTCGGGCTGGCGGGCTGCGGCGGAGCGGACGACGGGGGCACCGCCGGGCGCACCGCCTCGGCACCACCGG TGACCACGACCGCCGGCACGCCGTCGGCGAGCGTCGCAGCCAGGCCCACCGGGTCGCCCCGCGGCGGCCCGGCGTCGGCG ACGCCGTCCCACCTGTCCACGACCCCGGGCGAACCCGCGTGGTCGAGTGAGCCGCGCCGCGTCGAGCATGCGCTGCCCGG CACGGCGACGGTCGTCGCGGTGCGCGGCGCGCACAACGTCGCCGGCGGGCTGGAGTTCGACCGGCTGGTGATCGAGTTCC GGGATCGCGTTCCCGGCTATGACGTGCGGTACGTGGCCGATGTGCGATCGCCGGGAGAGGGCGCGGTGGTCCCGCTGCGC GGACAGGCGTTCCTCGAACTGGTGCTGTTCCCGGCGGCGGCCCACGACGACGCCGGGACGTCGACGCTGACCACCCCGCG GACCGGTGGTGGGCTGCCCGCGCTCGTCCAGTACCGGCTGACCGGTGACTACGAGGGCTATGTCCACTTCGGCCTCGGCG TCGACGACAGGGTCGGCTTCCGGGTGCTCGAACTGTCGGATCCGGCGCGTCTGGTGGTTGACCTCGCGGCCTGA
Upstream 100 bases:
>100_bases GCCGCGCCGCGCCGCGCCGACGTCACACCTGCCGGCGCCACCGGATGGCCGGTCAGGCCCGCCGGCTGTCCTGGCGGTCG CAGACCGGGAGGTCGTAGCC
Downstream 100 bases:
>100_bases GCGCCGCGTCCCCGGCCGCCCCACGGCTGGCGGGGTGGCCGCGCAGCCGGGCCGCGTGGCCGTTCAGCCGCGGGTCGGGC ATCGGCACCCGCTCGATCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MNRLTQSPPARRGAGRRRVGTLALAAGVLALGLAGCGGADDGGTAGRTASAPPVTTTAGTPSASVAARPTGSPRGGPASA TPSHLSTTPGEPAWSSEPRRVEHALPGTATVVAVRGAHNVAGGLEFDRLVIEFRDRVPGYDVRYVADVRSPGEGAVVPLR GQAFLELVLFPAAAHDDAGTSTLTTPRTGGGLPALVQYRLTGDYEGYVHFGLGVDDRVGFRVLELSDPARLVVDLAA
Sequences:
>Translated_237_residues MNRLTQSPPARRGAGRRRVGTLALAAGVLALGLAGCGGADDGGTAGRTASAPPVTTTAGTPSASVAARPTGSPRGGPASA TPSHLSTTPGEPAWSSEPRRVEHALPGTATVVAVRGAHNVAGGLEFDRLVIEFRDRVPGYDVRYVADVRSPGEGAVVPLR GQAFLELVLFPAAAHDDAGTSTLTTPRTGGGLPALVQYRLTGDYEGYVHFGLGVDDRVGFRVLELSDPARLVVDLAA >Mature_237_residues MNRLTQSPPARRGAGRRRVGTLALAAGVLALGLAGCGGADDGGTAGRTASAPPVTTTAGTPSASVAARPTGSPRGGPASA TPSHLSTTPGEPAWSSEPRRVEHALPGTATVVAVRGAHNVAGGLEFDRLVIEFRDRVPGYDVRYVADVRSPGEGAVVPLR GQAFLELVLFPAAAHDDAGTSTLTTPRTGGGLPALVQYRLTGDYEGYVHFGLGVDDRVGFRVLELSDPARLVVDLAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24177; Mature: 24177
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRLTQSPPARRGAGRRRVGTLALAAGVLALGLAGCGGADDGGTAGRTASAPPVTTTAGT CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCC PSASVAARPTGSPRGGPASATPSHLSTTPGEPAWSSEPRRVEHALPGTATVVAVRGAHNV CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEEEEEECCCCC AGGLEFDRLVIEFRDRVPGYDVRYVADVRSPGEGAVVPLRGQAFLELVLFPAAAHDDAGT CCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEECCHHEEEEEEECCCCCCCCCC STLTTPRTGGGLPALVQYRLTGDYEGYVHFGLGVDDRVGFRVLELSDPARLVVDLAA CEECCCCCCCCCCEEEEEEECCCCCCEEEECCCCCCCCCEEEEEECCCCEEEEEECC >Mature Secondary Structure MNRLTQSPPARRGAGRRRVGTLALAAGVLALGLAGCGGADDGGTAGRTASAPPVTTTAGT CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCC PSASVAARPTGSPRGGPASATPSHLSTTPGEPAWSSEPRRVEHALPGTATVVAVRGAHNV CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEEEEEECCCCC AGGLEFDRLVIEFRDRVPGYDVRYVADVRSPGEGAVVPLRGQAFLELVLFPAAAHDDAGT CCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEECCHHEEEEEEECCCCCCCCCC STLTTPRTGGGLPALVQYRLTGDYEGYVHFGLGVDDRVGFRVLELSDPARLVVDLAA CEECCCCCCCCCCEEEEEEECCCCCCEEEECCCCCCCCCEEEEEECCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA