| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318647
Identifier: 158318647
GI number: 158318647
Start: 8424335
End: 8424679
Strand: Direct
Name: 158318647
Synonym: Franean1_6915
Alternate gene names: NA
Gene position: 8424335-8424679 (Clockwise)
Preceding gene: 158318646
Following gene: 158318648
Centisome position: 93.79
GC content: 66.38
Gene sequence:
>345_bases ATGACCACCACTGTGGACACATCCCTGCCCGAGCGGTTCCGCGCCCTCGAGCCGTGGGTCGCCGACTGGAACCTGGCGAC CCGGGTCGAGCGTTACGAGAAGCGGCTGTCGAAGACCATCGACGAGCTGCAGGACTTCTACGACGCGATCGCGCCGCTCG CCGAGGAGGCCATCGCCTACCTCGACACGCGCGACGTGAACGCCCTGTCCGACGAGGACACCCGGCTGCTGCGCCTGCTC TACTCGATGATCATGGTGTCGTACCCGGTGAACATCTTCAAGCAGCCCCGGATCCCGGACTCCGGCGCGGCTTTCTTCGA CACCGCCGTCGAACCGGCCCTCTGA
Upstream 100 bases:
>100_bases TGTCCGACATGGAGCTGATGATCCGTCAGTTCCACAAGGTTGTCCGGGACGCCGTCGCGGCGCACCAGGCCGGCAGCGAG AAGTAGAGGAACCCCTCGAC
Downstream 100 bases:
>100_bases GAAGGCGACCTGCCATGGGTACCACCACCAGGAAGATCACTCCGAACACCGGCACGGAGTTCAGCGGGCTGAAGGGTACG CAGCTCGTCGACAAGGGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MTTTVDTSLPERFRALEPWVADWNLATRVERYEKRLSKTIDELQDFYDAIAPLAEEAIAYLDTRDVNALSDEDTRLLRLL YSMIMVSYPVNIFKQPRIPDSGAAFFDTAVEPAL
Sequences:
>Translated_114_residues MTTTVDTSLPERFRALEPWVADWNLATRVERYEKRLSKTIDELQDFYDAIAPLAEEAIAYLDTRDVNALSDEDTRLLRLL YSMIMVSYPVNIFKQPRIPDSGAAFFDTAVEPAL >Mature_113_residues TTTVDTSLPERFRALEPWVADWNLATRVERYEKRLSKTIDELQDFYDAIAPLAEEAIAYLDTRDVNALSDEDTRLLRLLY SMIMVSYPVNIFKQPRIPDSGAAFFDTAVEPAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13090; Mature: 12959
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTVDTSLPERFRALEPWVADWNLATRVERYEKRLSKTIDELQDFYDAIAPLAEEAIAY CCCCCCCHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDTRDVNALSDEDTRLLRLLYSMIMVSYPVNIFKQPRIPDSGAAFFDTAVEPAL HCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCHHHHHHCCCCC >Mature Secondary Structure TTTVDTSLPERFRALEPWVADWNLATRVERYEKRLSKTIDELQDFYDAIAPLAEEAIAY CCCCCCHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDTRDVNALSDEDTRLLRLLYSMIMVSYPVNIFKQPRIPDSGAAFFDTAVEPAL HCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA