| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318525
Identifier: 158318525
GI number: 158318525
Start: 8276423
End: 8277229
Strand: Reverse
Name: 158318525
Synonym: Franean1_6793
Alternate gene names: NA
Gene position: 8277229-8276423 (Counterclockwise)
Preceding gene: 158318526
Following gene: 158318524
Centisome position: 92.15
GC content: 71.0
Gene sequence:
>807_bases ATGACGACAACTCGCCGAACGCTGCTGGCCGGATCAGCCGCGGTCGCGACCGGCACCACGGCCGGCGCAGTGCTCGGAGC GCCCGCCGCGCAGGCACGCACCCAGCCCGACGGCAGGCAGAAACCCACCGTGGTACTCGTGCACGGCGCGTTCGCCGACG CCTCCGGCTGGAACGACGTCGCCGCCCGGCTCATCCGCGACGGCTACCCGGTCATCGCCCCGGCGAACCCGCTGCGCGGC GTTGCCGCCGACTCCTCCTACCTGGCCAGCATCCTCGCCACCCTCAGCGGCCCGCTCGTCCTCGCAGCCCACTCCTACGG CGGAATCGTCGTCACGAACGCCGCGACCGGCAACGCCAACGTGAAGGCGCTGGTCTACGTGGCCGCGTTCGTACCAGATC AGGGCGAGACGCTGCTGGGCCTGCAGACGAAGTACCCGGGAAGCAAGCTCAACGAGACGGCGCTGGACCTCCGTCCCCAC GGTGCGGGCGTCGACGGATATATCAAGAAAGAGGTCTTCCGCGACGTGTTCGCCGGCGATGTGCCGAGGGCGACCACCGA CCTGATGTGGGCCGGCCAGCGGCCGAGTGACGTGCGCACGCTGCAGGAGCCGTCCGGCGCCCCGGCCTGGAAGACCGTTC CTTCCTGGTACCTCGTTGCCCGCAACGACAACGTGCTTCCCGCCGCGGCGCAGCGGTTCATGGCGCGGCGGGCCGGCGCG CGCACCGTCGAGGTCGGTGCCTCGCACGTCGCGATGATCGTTCAGCCCGCCGCGACGGCCGATCTCATCAGACGCGCCAC GCTCTGA
Upstream 100 bases:
>100_bases GGTGTGCGTCCGGATTCGTTCAGTGCTCGTCAAGTATCTGACTCTACGCTAACCCTCGATCGCGGCTGAGAGCGCAACGG ATATCGAAGGGTCTACATTG
Downstream 100 bases:
>100_bases CGAAGCCCGCCACCGTCACCGACCTGCCGGAGGACGCGGGCGACGAGACCGGTTCCGGCCTCCCCCAGGGCGCGTTCCAG CTACTCGATGACGCTCGGGT
Product: secreted protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MTTTRRTLLAGSAAVATGTTAGAVLGAPAAQARTQPDGRQKPTVVLVHGAFADASGWNDVAARLIRDGYPVIAPANPLRG VAADSSYLASILATLSGPLVLAAHSYGGIVVTNAATGNANVKALVYVAAFVPDQGETLLGLQTKYPGSKLNETALDLRPH GAGVDGYIKKEVFRDVFAGDVPRATTDLMWAGQRPSDVRTLQEPSGAPAWKTVPSWYLVARNDNVLPAAAQRFMARRAGA RTVEVGASHVAMIVQPAATADLIRRATL
Sequences:
>Translated_268_residues MTTTRRTLLAGSAAVATGTTAGAVLGAPAAQARTQPDGRQKPTVVLVHGAFADASGWNDVAARLIRDGYPVIAPANPLRG VAADSSYLASILATLSGPLVLAAHSYGGIVVTNAATGNANVKALVYVAAFVPDQGETLLGLQTKYPGSKLNETALDLRPH GAGVDGYIKKEVFRDVFAGDVPRATTDLMWAGQRPSDVRTLQEPSGAPAWKTVPSWYLVARNDNVLPAAAQRFMARRAGA RTVEVGASHVAMIVQPAATADLIRRATL >Mature_267_residues TTTRRTLLAGSAAVATGTTAGAVLGAPAAQARTQPDGRQKPTVVLVHGAFADASGWNDVAARLIRDGYPVIAPANPLRGV AADSSYLASILATLSGPLVLAAHSYGGIVVTNAATGNANVKALVYVAAFVPDQGETLLGLQTKYPGSKLNETALDLRPHG AGVDGYIKKEVFRDVFAGDVPRATTDLMWAGQRPSDVRTLQEPSGAPAWKTVPSWYLVARNDNVLPAAAQRFMARRAGAR TVEVGASHVAMIVQPAATADLIRRATL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27859; Mature: 27728
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTRRTLLAGSAAVATGTTAGAVLGAPAAQARTQPDGRQKPTVVLVHGAFADASGWNDV CCCCCCHHEECCCCEECCCCCCHHHCCCHHHHCCCCCCCCCCEEEEEEECCCCCCCHHHH AARLIRDGYPVIAPANPLRGVAADSSYLASILATLSGPLVLAAHSYGGIVVTNAATGNAN HHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCEEEEECCCCCCC VKALVYVAAFVPDQGETLLGLQTKYPGSKLNETALDLRPHGAGVDGYIKKEVFRDVFAGD EEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCC VPRATTDLMWAGQRPSDVRTLQEPSGAPAWKTVPSWYLVARNDNVLPAAAQRFMARRAGA CCCCCHHHEECCCCCCHHHHHCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCC RTVEVGASHVAMIVQPAATADLIRRATL CEEEECCCEEEEEECCHHHHHHHHHHCC >Mature Secondary Structure TTTRRTLLAGSAAVATGTTAGAVLGAPAAQARTQPDGRQKPTVVLVHGAFADASGWNDV CCCCCHHEECCCCEECCCCCCHHHCCCHHHHCCCCCCCCCCEEEEEEECCCCCCCHHHH AARLIRDGYPVIAPANPLRGVAADSSYLASILATLSGPLVLAAHSYGGIVVTNAATGNAN HHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCEEEEECCCCCCC VKALVYVAAFVPDQGETLLGLQTKYPGSKLNETALDLRPHGAGVDGYIKKEVFRDVFAGD EEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCC VPRATTDLMWAGQRPSDVRTLQEPSGAPAWKTVPSWYLVARNDNVLPAAAQRFMARRAGA CCCCCHHHEECCCCCCHHHHHCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCC RTVEVGASHVAMIVQPAATADLIRRATL CEEEECCCEEEEEECCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA