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The map label for this gene is afsR [H]

Identifier: 158318526

GI number: 158318526

Start: 8277501

End: 8279672

Strand: Reverse

Name: afsR [H]

Synonym: Franean1_6794

Alternate gene names: 158318526

Gene position: 8279672-8277501 (Counterclockwise)

Preceding gene: 158318527

Following gene: 158318525

Centisome position: 92.18

GC content: 71.92

Gene sequence:

>2172_bases
GTGAGTACCACCGCCACCCCCGGAGCAGGCACGGCTTCCTCCGGCGGACAGCTGTGTCTTCAGATTCTCGGCCCGCTGCG
GATCTGGCGGGGCGGCGTCGAGCTGGAGGCCGGGCCTCGCCAGCAGGCGTACCTGCTCGCTCTGCTGCTCGCCCGTGCGG
GCAGGCCGACCAGCATGAGCCAGTTGATCGATCTGATCTGGGGCGACGACGTCCCGGCCTCGGCTGTCAACATTCTCCAG
AAGTACGTCGGTGCGCTGCGGCGGCTGCTGGAGCCCACGCTGCCCGCGCGTGCGACCGGGTCGTACCTGCAGCGCCGCGG
TGACAGTTACCTGTTCGCCGCCGGCCCCGTCATGCTGGACGTCGTCACCTTCCGGGAACTGGTCGAGGTGGCCAGGGCCG
GCGTCGCGGAGCAGCGGCCCGACGCGGCGCTCGACTGGTACGCGCAGGCACTCGGGCTCTGGCACGGCCCCGCAGGCGAC
GGCCTGGCTCACGGATCGAGTGCGATGTCCGTGTTCTCCGCACTGGACGGTGAGTTCCTTGACGCGTGCGTGGCGGCGGC
CGAGCTCGCGGTGGCACGGGGCCGGCCTGCGCGCGTGCTCGCGCCGCTGCGCCTGGCCGCGGGGATGGCGCCGCTGCACG
AGACCGTGCAGGCGAGTCTCGTCATCGCCCTGGCCGCCGCCGGTCAGCAGGCGGAAGCGCTGTCCGTCCTGCGGGCAGTC
CGTGCCCGGCTCGCCGAGGAGCTCGGCATCGATCCCGGACCGGCGCTGGTGGCCGCGCACCGGCGTGTGCTGGAGCCGGC
ACCGGCCGAGGGAATGCCTTCCGAGTGGCTGCGGGTGCCTCTGCGGGTGCCTGCCCTCGGGACGACGTCCGCCGACGGCA
TGATCGGCCGAGCCGAGGAGCTCGCGGTGCTGCGCCGCGCAGTGGACTCGGCGTTCGCCGGCGGCGCGGGGCTCGTCGTC
GTCGAGGGTGAGCCGGGGGTGGGCAAGACGCGCCTGCTGGAGGAGGCCGGCGCGGAGGCGGACGGGCACGGCGCGCTCGT
CGTCTGGGGCCGCTGCCTCGAAGGCGACGGCACACCGGCGATGTGGCCATGGGAACAGGCGGTCGGCCTGCTCCTCGACA
ACCTGCCCACCGCTGCGCGGGAGGACTGGCACGCCGGTGAGCTCAGCCGTCTCGTGGAGCCCCGCGGCGTCACCCCCGCG
GCTCCGGCACTGCAGGACAAACCAGTGCTGTCGGCCAAATCAGTTCTGTCGGCCAGACCAGCACTGTCAGACACACCGGT
GCTGTCGGACAGCGGCACCCGGTTCCGGCTGTTCGAACGAGCTGTCGCCCTCATCAGCCACATCTCGGTGGGACGCCCGG
TGGTGATCGTCGTCGACGACCTCCAGTGGGCCGACGTCGCCTCGCTGCAGATGTTCAGCCACCTGGCCGCCCGCCTGCCG
GTCAGCGCCGTGATCATCGGCGCGATCCGCGACCGGTTACCCGCAGCCGGCTCGGAGCTGGCCCGGATGCTCGCCGCCGC
GAGCCGGCAACCCCGGCACCGCCGGATCCGACTCGGCCCGCTCAACCCGGCAGAGGCAGCTGAACTCGTCCGCCGCGACA
CCGGCCAGATTCCCAGCCCCGGCGTCGCCCGCAGCATCCACGCCCGCACCGCCGGCAACCCCTTCCTGATCCGGGAACTG
GCCCGGCATCTCGCCGACAGCGGCGATCTCACCGACGCCGCCGCCGCACAGGCCGGCGTGCCCTCCACCGTCCGCGACGT
CGTCCGTGACCGGATGGCCGGCCTCGACAACGACGCCACAGACCTGTTACAGATTGCCGCGCTGATCGGCCGGGACGTCG
ACCTCGCCCTGCTCGCCCACGCCTCCGAGCTCGACGTCCAGACCTGCATCGACCACCTTGAACCCCTGGAAGCACTCGGC
CTGCTCGTACCCCGGCCGGGGAAGCCGTTCTCCTACCGCTTCGTGCACGACCTCGTCCGAGAGTCGGTCGCCGACACCAC
ACCGTTGCGGCGGTTGGCCCGACTGCACCTGCTGGTCCCGGACGCGCTGGAGCGGATGAACGATACGGCTCAGTGCCTGG
AGTTCAACGTGGACGGCGAGCGGAAAGCCCAGACATGGAACGCCAGCCCGATGCCCCACGCCAGTATCGACCACAGGGGC
CAGAAGAAATGA

Upstream 100 bases:

>100_bases
GCGCTCCAGAGCGGCTGACACGACGTAGGTCATCTGACAGATCAGCGGGCACCGACTGCCCGGCGATGCTGCGAGCATCG
CCCGCACGGAGGAGCCCGCA

Downstream 100 bases:

>100_bases
TCCGGGGTGAGAACCGCCCACAGCACGACCTGGACAAGATTGGCCAGGACATAGCACAGAAGATGAATCCGCAGGCCCCA
CTTCTCGGCGGTCTCACTTT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 723; Mature: 722

Protein sequence:

>723_residues
MSTTATPGAGTASSGGQLCLQILGPLRIWRGGVELEAGPRQQAYLLALLLARAGRPTSMSQLIDLIWGDDVPASAVNILQ
KYVGALRRLLEPTLPARATGSYLQRRGDSYLFAAGPVMLDVVTFRELVEVARAGVAEQRPDAALDWYAQALGLWHGPAGD
GLAHGSSAMSVFSALDGEFLDACVAAAELAVARGRPARVLAPLRLAAGMAPLHETVQASLVIALAAAGQQAEALSVLRAV
RARLAEELGIDPGPALVAAHRRVLEPAPAEGMPSEWLRVPLRVPALGTTSADGMIGRAEELAVLRRAVDSAFAGGAGLVV
VEGEPGVGKTRLLEEAGAEADGHGALVVWGRCLEGDGTPAMWPWEQAVGLLLDNLPTAAREDWHAGELSRLVEPRGVTPA
APALQDKPVLSAKSVLSARPALSDTPVLSDSGTRFRLFERAVALISHISVGRPVVIVVDDLQWADVASLQMFSHLAARLP
VSAVIIGAIRDRLPAAGSELARMLAAASRQPRHRRIRLGPLNPAEAAELVRRDTGQIPSPGVARSIHARTAGNPFLIREL
ARHLADSGDLTDAAAAQAGVPSTVRDVVRDRMAGLDNDATDLLQIAALIGRDVDLALLAHASELDVQTCIDHLEPLEALG
LLVPRPGKPFSYRFVHDLVRESVADTTPLRRLARLHLLVPDALERMNDTAQCLEFNVDGERKAQTWNASPMPHASIDHRG
QKK

Sequences:

>Translated_723_residues
MSTTATPGAGTASSGGQLCLQILGPLRIWRGGVELEAGPRQQAYLLALLLARAGRPTSMSQLIDLIWGDDVPASAVNILQ
KYVGALRRLLEPTLPARATGSYLQRRGDSYLFAAGPVMLDVVTFRELVEVARAGVAEQRPDAALDWYAQALGLWHGPAGD
GLAHGSSAMSVFSALDGEFLDACVAAAELAVARGRPARVLAPLRLAAGMAPLHETVQASLVIALAAAGQQAEALSVLRAV
RARLAEELGIDPGPALVAAHRRVLEPAPAEGMPSEWLRVPLRVPALGTTSADGMIGRAEELAVLRRAVDSAFAGGAGLVV
VEGEPGVGKTRLLEEAGAEADGHGALVVWGRCLEGDGTPAMWPWEQAVGLLLDNLPTAAREDWHAGELSRLVEPRGVTPA
APALQDKPVLSAKSVLSARPALSDTPVLSDSGTRFRLFERAVALISHISVGRPVVIVVDDLQWADVASLQMFSHLAARLP
VSAVIIGAIRDRLPAAGSELARMLAAASRQPRHRRIRLGPLNPAEAAELVRRDTGQIPSPGVARSIHARTAGNPFLIREL
ARHLADSGDLTDAAAAQAGVPSTVRDVVRDRMAGLDNDATDLLQIAALIGRDVDLALLAHASELDVQTCIDHLEPLEALG
LLVPRPGKPFSYRFVHDLVRESVADTTPLRRLARLHLLVPDALERMNDTAQCLEFNVDGERKAQTWNASPMPHASIDHRG
QKK
>Mature_722_residues
STTATPGAGTASSGGQLCLQILGPLRIWRGGVELEAGPRQQAYLLALLLARAGRPTSMSQLIDLIWGDDVPASAVNILQK
YVGALRRLLEPTLPARATGSYLQRRGDSYLFAAGPVMLDVVTFRELVEVARAGVAEQRPDAALDWYAQALGLWHGPAGDG
LAHGSSAMSVFSALDGEFLDACVAAAELAVARGRPARVLAPLRLAAGMAPLHETVQASLVIALAAAGQQAEALSVLRAVR
ARLAEELGIDPGPALVAAHRRVLEPAPAEGMPSEWLRVPLRVPALGTTSADGMIGRAEELAVLRRAVDSAFAGGAGLVVV
EGEPGVGKTRLLEEAGAEADGHGALVVWGRCLEGDGTPAMWPWEQAVGLLLDNLPTAAREDWHAGELSRLVEPRGVTPAA
PALQDKPVLSAKSVLSARPALSDTPVLSDSGTRFRLFERAVALISHISVGRPVVIVVDDLQWADVASLQMFSHLAARLPV
SAVIIGAIRDRLPAAGSELARMLAAASRQPRHRRIRLGPLNPAEAAELVRRDTGQIPSPGVARSIHARTAGNPFLIRELA
RHLADSGDLTDAAAAQAGVPSTVRDVVRDRMAGLDNDATDLLQIAALIGRDVDLALLAHASELDVQTCIDHLEPLEALGL
LVPRPGKPFSYRFVHDLVRESVADTTPLRRLARLHLLVPDALERMNDTAQCLEFNVDGERKAQTWNASPMPHASIDHRGQ
KK

Specific function: Global regulatory protein for secondary metabolite formation [H]

COG id: COG3629

COG function: function code T; DNA-binding transcriptional activator of the SARP family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005158
- InterPro:   IPR000767
- InterPro:   IPR002182
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03704 BTAD; PF00931 NB-ARC; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 76614; Mature: 76483

Theoretical pI: Translated: 6.47; Mature: 6.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTATPGAGTASSGGQLCLQILGPLRIWRGGVELEAGPRQQAYLLALLLARAGRPTSMS
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHCCCCCCHH
QLIDLIWGDDVPASAVNILQKYVGALRRLLEPTLPARATGSYLQRRGDSYLFAAGPVMLD
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEECCHHHHH
VVTFRELVEVARAGVAEQRPDAALDWYAQALGLWHGPAGDGLAHGSSAMSVFSALDGEFL
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCHHHH
DACVAAAELAVARGRPARVLAPLRLAAGMAPLHETVQASLVIALAAAGQQAEALSVLRAV
HHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
RARLAEELGIDPGPALVAAHRRVLEPAPAEGMPSEWLRVPLRVPALGTTSADGMIGRAEE
HHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHCCCEECCCCCCCCCCCCCCHHHH
LAVLRRAVDSAFAGGAGLVVVEGEPGVGKTRLLEEAGAEADGHGALVVWGRCLEGDGTPA
HHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCC
MWPWEQAVGLLLDNLPTAAREDWHAGELSRLVEPRGVTPAAPALQDKPVLSAKSVLSARP
CCCHHHHHHHHHHCCCCHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCC
ALSDTPVLSDSGTRFRLFERAVALISHISVGRPVVIVVDDLQWADVASLQMFSHLAARLP
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCC
VSAVIIGAIRDRLPAAGSELARMLAAASRQPRHRRIRLGPLNPAEAAELVRRDTGQIPSP
HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCC
GVARSIHARTAGNPFLIRELARHLADSGDLTDAAAAQAGVPSTVRDVVRDRMAGLDNDAT
CHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCHH
DLLQIAALIGRDVDLALLAHASELDVQTCIDHLEPLEALGLLVPRPGKPFSYRFVHDLVR
HHHHHHHHHCCCCCHHHHHCCHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
ESVADTTPLRRLARLHLLVPDALERMNDTAQCLEFNVDGERKAQTWNASPMPHASIDHRG
HHHCCHHHHHHHHHHHHHCHHHHHHCCCHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCC
QKK
CCC
>Mature Secondary Structure 
STTATPGAGTASSGGQLCLQILGPLRIWRGGVELEAGPRQQAYLLALLLARAGRPTSMS
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHCCCCCCHH
QLIDLIWGDDVPASAVNILQKYVGALRRLLEPTLPARATGSYLQRRGDSYLFAAGPVMLD
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEECCHHHHH
VVTFRELVEVARAGVAEQRPDAALDWYAQALGLWHGPAGDGLAHGSSAMSVFSALDGEFL
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCHHHH
DACVAAAELAVARGRPARVLAPLRLAAGMAPLHETVQASLVIALAAAGQQAEALSVLRAV
HHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
RARLAEELGIDPGPALVAAHRRVLEPAPAEGMPSEWLRVPLRVPALGTTSADGMIGRAEE
HHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHCCCEECCCCCCCCCCCCCCHHHH
LAVLRRAVDSAFAGGAGLVVVEGEPGVGKTRLLEEAGAEADGHGALVVWGRCLEGDGTPA
HHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCC
MWPWEQAVGLLLDNLPTAAREDWHAGELSRLVEPRGVTPAAPALQDKPVLSAKSVLSARP
CCCHHHHHHHHHHCCCCHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCC
ALSDTPVLSDSGTRFRLFERAVALISHISVGRPVVIVVDDLQWADVASLQMFSHLAARLP
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCC
VSAVIIGAIRDRLPAAGSELARMLAAASRQPRHRRIRLGPLNPAEAAELVRRDTGQIPSP
HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCC
GVARSIHARTAGNPFLIRELARHLADSGDLTDAAAAQAGVPSTVRDVVRDRMAGLDNDAT
CHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCHH
DLLQIAALIGRDVDLALLAHASELDVQTCIDHLEPLEALGLLVPRPGKPFSYRFVHDLVR
HHHHHHHHHCCCCCHHHHHCCHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
ESVADTTPLRRLARLHLLVPDALERMNDTAQCLEFNVDGERKAQTWNASPMPHASIDHRG
HHHCCHHHHHHHHHHHHHCHHHHHHCCCHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCC
QKK
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2253887; 12000953; 2428809 [H]