| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318482
Identifier: 158318482
GI number: 158318482
Start: 8209453
End: 8210259
Strand: Reverse
Name: 158318482
Synonym: Franean1_6750
Alternate gene names: NA
Gene position: 8210259-8209453 (Counterclockwise)
Preceding gene: 158318484
Following gene: 158318476
Centisome position: 91.41
GC content: 68.03
Gene sequence:
>807_bases ATGTCCGGCATGGGTGCGGACGAGCCGGCGCGGAGCGCATGGTCGCGGGTGGACCCGAGCGTGCCGCACTCCGCTCGGGT CTGGAACTACTGGCTCGGGGGCAAGGACAACTTTCCCGCCGACCGGGAGCTGGGAGACAAGGTCTTCGAGGTCTACCCGG ACATCGTGCGGGTCGCCCGCGCGCAGCGGGAGTTCCTGGTCCGAGCGATCACCTTCCTTGCCCGCGAGGTGGGCATCCGC CAGTTCCTGGACATCGGCACCGGCCTGCCGACCGCCGACAACACCCATGAAGTCGCGCAGCGGATCGCCCCGGACTCCCG CATCACCTACGTCGACAACGATCCTCTGGTGCTGGTGCACGCCCGCGCGCTGCTGACCAGCGCACCCGGCGGCGCCACCG CCTACATCGACGCCGACGTACGCGACCCCGACAGGATTCTCACGGAGACGGCCGAGCTGTTGGACTTCACCAGGCCGGTC GCTCTGGTGATGTTCGGCATCATGGGGAACGTCGCCGACACCGACGAGGCGAAAAAGATCGTGAAACGGCTACTCGACGA GGTGCCGCCGGGAAGCTACCTCGCGCTCAACGACGGCACCCACGGCGAGGCCGTAGACAAGGCAATCGAGATCACCCAGG CAGACGGGCACCCCTACAACCTGCGTACCCCTGAGCAAGTCGCGTCCTTCTTCGACGGCCTCGACCTCGTCGAGCCAGGC GTGGTCTCAACGCCCCTCTGGCGGCCCCCGCCCGGGTCGGAACCGCAGCCACTCCACATCTTCGGCGGAGTCGGCCGCAA GCCGTAG
Upstream 100 bases:
>100_bases CACCGGGCACCGGGCACCGGACAACACGCGCCGGACCCCGGACACGGGGCATCGGCCTTCCGGCTGCGGGGTAAATCCGG GGTGCACCCGGGGGTGCATG
Downstream 100 bases:
>100_bases CCCGTCATCGACGGGGGTGGCCGTCCTCCGGGGGGACGGCGTCACGGGGCTGGTGGCCACGATCGGCGGGGTCTCGGTCG CGCTGATAGGCGCGACCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MSGMGADEPARSAWSRVDPSVPHSARVWNYWLGGKDNFPADRELGDKVFEVYPDIVRVARAQREFLVRAITFLAREVGIR QFLDIGTGLPTADNTHEVAQRIAPDSRITYVDNDPLVLVHARALLTSAPGGATAYIDADVRDPDRILTETAELLDFTRPV ALVMFGIMGNVADTDEAKKIVKRLLDEVPPGSYLALNDGTHGEAVDKAIEITQADGHPYNLRTPEQVASFFDGLDLVEPG VVSTPLWRPPPGSEPQPLHIFGGVGRKP
Sequences:
>Translated_268_residues MSGMGADEPARSAWSRVDPSVPHSARVWNYWLGGKDNFPADRELGDKVFEVYPDIVRVARAQREFLVRAITFLAREVGIR QFLDIGTGLPTADNTHEVAQRIAPDSRITYVDNDPLVLVHARALLTSAPGGATAYIDADVRDPDRILTETAELLDFTRPV ALVMFGIMGNVADTDEAKKIVKRLLDEVPPGSYLALNDGTHGEAVDKAIEITQADGHPYNLRTPEQVASFFDGLDLVEPG VVSTPLWRPPPGSEPQPLHIFGGVGRKP >Mature_267_residues SGMGADEPARSAWSRVDPSVPHSARVWNYWLGGKDNFPADRELGDKVFEVYPDIVRVARAQREFLVRAITFLAREVGIRQ FLDIGTGLPTADNTHEVAQRIAPDSRITYVDNDPLVLVHARALLTSAPGGATAYIDADVRDPDRILTETAELLDFTRPVA LVMFGIMGNVADTDEAKKIVKRLLDEVPPGSYLALNDGTHGEAVDKAIEITQADGHPYNLRTPEQVASFFDGLDLVEPGV VSTPLWRPPPGSEPQPLHIFGGVGRKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29283; Mature: 29152
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGMGADEPARSAWSRVDPSVPHSARVWNYWLGGKDNFPADRELGDKVFEVYPDIVRVAR CCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH AQREFLVRAITFLAREVGIRQFLDIGTGLPTADNTHEVAQRIAPDSRITYVDNDPLVLVH HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEEECCCCEEEEE ARALLTSAPGGATAYIDADVRDPDRILTETAELLDFTRPVALVMFGIMGNVADTDEAKKI HHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH VKRLLDEVPPGSYLALNDGTHGEAVDKAIEITQADGHPYNLRTPEQVASFFDGLDLVEPG HHHHHHHCCCCCEEEECCCCCHHHHHHHHHEEECCCCCCCCCCHHHHHHHHCCCCCCCCC VVSTPLWRPPPGSEPQPLHIFGGVGRKP CCCCCCCCCCCCCCCCCEEEECCCCCCC >Mature Secondary Structure SGMGADEPARSAWSRVDPSVPHSARVWNYWLGGKDNFPADRELGDKVFEVYPDIVRVAR CCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH AQREFLVRAITFLAREVGIRQFLDIGTGLPTADNTHEVAQRIAPDSRITYVDNDPLVLVH HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEEECCCCEEEEE ARALLTSAPGGATAYIDADVRDPDRILTETAELLDFTRPVALVMFGIMGNVADTDEAKKI HHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH VKRLLDEVPPGSYLALNDGTHGEAVDKAIEITQADGHPYNLRTPEQVASFFDGLDLVEPG HHHHHHHCCCCCEEEECCCCCHHHHHHHHHEEECCCCCCCCCCHHHHHHHHCCCCCCCCC VVSTPLWRPPPGSEPQPLHIFGGVGRKP CCCCCCCCCCCCCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA