Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158318482

Identifier: 158318482

GI number: 158318482

Start: 8209453

End: 8210259

Strand: Reverse

Name: 158318482

Synonym: Franean1_6750

Alternate gene names: NA

Gene position: 8210259-8209453 (Counterclockwise)

Preceding gene: 158318484

Following gene: 158318476

Centisome position: 91.41

GC content: 68.03

Gene sequence:

>807_bases
ATGTCCGGCATGGGTGCGGACGAGCCGGCGCGGAGCGCATGGTCGCGGGTGGACCCGAGCGTGCCGCACTCCGCTCGGGT
CTGGAACTACTGGCTCGGGGGCAAGGACAACTTTCCCGCCGACCGGGAGCTGGGAGACAAGGTCTTCGAGGTCTACCCGG
ACATCGTGCGGGTCGCCCGCGCGCAGCGGGAGTTCCTGGTCCGAGCGATCACCTTCCTTGCCCGCGAGGTGGGCATCCGC
CAGTTCCTGGACATCGGCACCGGCCTGCCGACCGCCGACAACACCCATGAAGTCGCGCAGCGGATCGCCCCGGACTCCCG
CATCACCTACGTCGACAACGATCCTCTGGTGCTGGTGCACGCCCGCGCGCTGCTGACCAGCGCACCCGGCGGCGCCACCG
CCTACATCGACGCCGACGTACGCGACCCCGACAGGATTCTCACGGAGACGGCCGAGCTGTTGGACTTCACCAGGCCGGTC
GCTCTGGTGATGTTCGGCATCATGGGGAACGTCGCCGACACCGACGAGGCGAAAAAGATCGTGAAACGGCTACTCGACGA
GGTGCCGCCGGGAAGCTACCTCGCGCTCAACGACGGCACCCACGGCGAGGCCGTAGACAAGGCAATCGAGATCACCCAGG
CAGACGGGCACCCCTACAACCTGCGTACCCCTGAGCAAGTCGCGTCCTTCTTCGACGGCCTCGACCTCGTCGAGCCAGGC
GTGGTCTCAACGCCCCTCTGGCGGCCCCCGCCCGGGTCGGAACCGCAGCCACTCCACATCTTCGGCGGAGTCGGCCGCAA
GCCGTAG

Upstream 100 bases:

>100_bases
CACCGGGCACCGGGCACCGGACAACACGCGCCGGACCCCGGACACGGGGCATCGGCCTTCCGGCTGCGGGGTAAATCCGG
GGTGCACCCGGGGGTGCATG

Downstream 100 bases:

>100_bases
CCCGTCATCGACGGGGGTGGCCGTCCTCCGGGGGGACGGCGTCACGGGGCTGGTGGCCACGATCGGCGGGGTCTCGGTCG
CGCTGATAGGCGCGACCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MSGMGADEPARSAWSRVDPSVPHSARVWNYWLGGKDNFPADRELGDKVFEVYPDIVRVARAQREFLVRAITFLAREVGIR
QFLDIGTGLPTADNTHEVAQRIAPDSRITYVDNDPLVLVHARALLTSAPGGATAYIDADVRDPDRILTETAELLDFTRPV
ALVMFGIMGNVADTDEAKKIVKRLLDEVPPGSYLALNDGTHGEAVDKAIEITQADGHPYNLRTPEQVASFFDGLDLVEPG
VVSTPLWRPPPGSEPQPLHIFGGVGRKP

Sequences:

>Translated_268_residues
MSGMGADEPARSAWSRVDPSVPHSARVWNYWLGGKDNFPADRELGDKVFEVYPDIVRVARAQREFLVRAITFLAREVGIR
QFLDIGTGLPTADNTHEVAQRIAPDSRITYVDNDPLVLVHARALLTSAPGGATAYIDADVRDPDRILTETAELLDFTRPV
ALVMFGIMGNVADTDEAKKIVKRLLDEVPPGSYLALNDGTHGEAVDKAIEITQADGHPYNLRTPEQVASFFDGLDLVEPG
VVSTPLWRPPPGSEPQPLHIFGGVGRKP
>Mature_267_residues
SGMGADEPARSAWSRVDPSVPHSARVWNYWLGGKDNFPADRELGDKVFEVYPDIVRVARAQREFLVRAITFLAREVGIRQ
FLDIGTGLPTADNTHEVAQRIAPDSRITYVDNDPLVLVHARALLTSAPGGATAYIDADVRDPDRILTETAELLDFTRPVA
LVMFGIMGNVADTDEAKKIVKRLLDEVPPGSYLALNDGTHGEAVDKAIEITQADGHPYNLRTPEQVASFFDGLDLVEPGV
VSTPLWRPPPGSEPQPLHIFGGVGRKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29283; Mature: 29152

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGMGADEPARSAWSRVDPSVPHSARVWNYWLGGKDNFPADRELGDKVFEVYPDIVRVAR
CCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
AQREFLVRAITFLAREVGIRQFLDIGTGLPTADNTHEVAQRIAPDSRITYVDNDPLVLVH
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEEECCCCEEEEE
ARALLTSAPGGATAYIDADVRDPDRILTETAELLDFTRPVALVMFGIMGNVADTDEAKKI
HHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
VKRLLDEVPPGSYLALNDGTHGEAVDKAIEITQADGHPYNLRTPEQVASFFDGLDLVEPG
HHHHHHHCCCCCEEEECCCCCHHHHHHHHHEEECCCCCCCCCCHHHHHHHHCCCCCCCCC
VVSTPLWRPPPGSEPQPLHIFGGVGRKP
CCCCCCCCCCCCCCCCCEEEECCCCCCC
>Mature Secondary Structure 
SGMGADEPARSAWSRVDPSVPHSARVWNYWLGGKDNFPADRELGDKVFEVYPDIVRVAR
CCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
AQREFLVRAITFLAREVGIRQFLDIGTGLPTADNTHEVAQRIAPDSRITYVDNDPLVLVH
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEEECCCCEEEEE
ARALLTSAPGGATAYIDADVRDPDRILTETAELLDFTRPVALVMFGIMGNVADTDEAKKI
HHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
VKRLLDEVPPGSYLALNDGTHGEAVDKAIEITQADGHPYNLRTPEQVASFFDGLDLVEPG
HHHHHHHCCCCCEEEECCCCCHHHHHHHHHEEECCCCCCCCCCHHHHHHHHCCCCCCCCC
VVSTPLWRPPPGSEPQPLHIFGGVGRKP
CCCCCCCCCCCCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA