Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158318476

Identifier: 158318476

GI number: 158318476

Start: 8202315

End: 8203640

Strand: Reverse

Name: 158318476

Synonym: Franean1_6744

Alternate gene names: NA

Gene position: 8203640-8202315 (Counterclockwise)

Preceding gene: 158318482

Following gene: 158318475

Centisome position: 91.33

GC content: 75.94

Gene sequence:

>1326_bases
ATGACCGACGAGAAAACACCCGCCGTCGATCCGGACGCCGCACGTGTCCTGGAGATCCTGCGGGATCATGAAGGTCCCGC
GACCGCGTCGGAAATGCGGGTAGCGGCCGGGATGACGGTGCCCCAGTTGCGGCCAGTGTTGGACCGGCTGGCAGACGCCG
GTCTGGTTCTGGCGTCCCAGCGGGACGGTGCCAGGGGGCGGCCCTGGCAGTGGGCCCTGATCCCCACCCTGGACGACGCC
CCCACCGCCGACGATGCCACCGCATCCGACCCGCCACCCACTGACACCAGCGCACCGGTCGACGACGCCGTGCCGGCCGA
CGACACCGTGCCGGTGATGACCGGACCAGCCGAAACCGTGGACACCCCGCCCGACCCGGTGGCCGCGCCGGACCCCGCCA
CCACCGAGATCTCCGCGTCCGACCCGGCGCAGCGCCTGCCCACCGGGACCGCCGACCCGGAGCGGCAGGCGGCGAGCCCG
GGAGACGCCCTCGAGGCCACGGCCCTCACGGTGCCGACACACGGGCCGGCCGAGGACGTGTCCGCCCCGGACCCCGCCAC
CGCCGACCTGTCCACGGTGGAACCGGTCGAGACCGAGACGGACCCCAGCCCGGTGGCGGACCTCCCCGACACCGACCCGC
CGATGCAGGAGCCGCCGACCGACCAGGACCGGCACCTCGGCACCTCCGCGCCGCTCGACGCTGCGCGGGCTGTCACCGCG
AGCGAGCCCGCGCAGGATCCGGCACCCGAGGAGGACCCCGCCCCGCCGAACGCACCGGCCGACAGCACGGTGCCCGGCGA
GAGCGCCGACACCTCGGCGCACGCTGACGAGCCGACCGGGATCGCTGCGGCGCCGGGTGGCCAGGCCATCCAGGCCCCGC
CCGACGGCATCCCGAGCGCCGCCGGGGACGGGGCGGGCACGGCGGGCTGCGCGGCGTGGGCCTGCCCGGCACCGCAATGC
CCGATACGGGCCGGCGGACCGCCGCCCACCAGCGGGCCCCAGCCTTCGCGGCGGCGGGCCCCGGCGAAGGCGCCACGGCC
GGCCGGGGATCGGGCGGTGAACGGCGACGGGCAGCCCCGGTTGCCCTCCGGGGGGCTCACCGCGATGGTCCGGGATGTTC
TGGCCGCGAACGCGGATGTGCCGTTGAGCGTGACCGAGATCAGCCGGGAAATCCCCGGACGGTCCTCCGGGGCGATCAAC
GCCTCCTGCGAGGCGATGACTAGCCGTGGCGAGGTGTCCCTCGTCGAGGGCAGGCCGAAGCGCTACCGGATCACGGCCGC
CGGCCTCGCGCTCACCACCACCGCCGCTGCCTCGACCGGCAGCTGA

Upstream 100 bases:

>100_bases
CTGGACGTGGTTGATGGATATCGCTGGCTGAATTCCGTCGAATCGAGATACAGCTGATTGCGCACCCAGAAACCCGCACC
CGAAATGGGGGTCGAGAACA

Downstream 100 bases:

>100_bases
GCAGGCCCCGCCCCGCCGGCCTACTGGCCGGGGGGTTGTTCCCGGGCGGCGGGAATGCCGCCCGCCGCCCGGGACCCGAT
TCGCCCCTACCCCTGCGGAG

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 441; Mature: 440

Protein sequence:

>441_residues
MTDEKTPAVDPDAARVLEILRDHEGPATASEMRVAAGMTVPQLRPVLDRLADAGLVLASQRDGARGRPWQWALIPTLDDA
PTADDATASDPPPTDTSAPVDDAVPADDTVPVMTGPAETVDTPPDPVAAPDPATTEISASDPAQRLPTGTADPERQAASP
GDALEATALTVPTHGPAEDVSAPDPATADLSTVEPVETETDPSPVADLPDTDPPMQEPPTDQDRHLGTSAPLDAARAVTA
SEPAQDPAPEEDPAPPNAPADSTVPGESADTSAHADEPTGIAAAPGGQAIQAPPDGIPSAAGDGAGTAGCAAWACPAPQC
PIRAGGPPPTSGPQPSRRRAPAKAPRPAGDRAVNGDGQPRLPSGGLTAMVRDVLAANADVPLSVTEISREIPGRSSGAIN
ASCEAMTSRGEVSLVEGRPKRYRITAAGLALTTTAAASTGS

Sequences:

>Translated_441_residues
MTDEKTPAVDPDAARVLEILRDHEGPATASEMRVAAGMTVPQLRPVLDRLADAGLVLASQRDGARGRPWQWALIPTLDDA
PTADDATASDPPPTDTSAPVDDAVPADDTVPVMTGPAETVDTPPDPVAAPDPATTEISASDPAQRLPTGTADPERQAASP
GDALEATALTVPTHGPAEDVSAPDPATADLSTVEPVETETDPSPVADLPDTDPPMQEPPTDQDRHLGTSAPLDAARAVTA
SEPAQDPAPEEDPAPPNAPADSTVPGESADTSAHADEPTGIAAAPGGQAIQAPPDGIPSAAGDGAGTAGCAAWACPAPQC
PIRAGGPPPTSGPQPSRRRAPAKAPRPAGDRAVNGDGQPRLPSGGLTAMVRDVLAANADVPLSVTEISREIPGRSSGAIN
ASCEAMTSRGEVSLVEGRPKRYRITAAGLALTTTAAASTGS
>Mature_440_residues
TDEKTPAVDPDAARVLEILRDHEGPATASEMRVAAGMTVPQLRPVLDRLADAGLVLASQRDGARGRPWQWALIPTLDDAP
TADDATASDPPPTDTSAPVDDAVPADDTVPVMTGPAETVDTPPDPVAAPDPATTEISASDPAQRLPTGTADPERQAASPG
DALEATALTVPTHGPAEDVSAPDPATADLSTVEPVETETDPSPVADLPDTDPPMQEPPTDQDRHLGTSAPLDAARAVTAS
EPAQDPAPEEDPAPPNAPADSTVPGESADTSAHADEPTGIAAAPGGQAIQAPPDGIPSAAGDGAGTAGCAAWACPAPQCP
IRAGGPPPTSGPQPSRRRAPAKAPRPAGDRAVNGDGQPRLPSGGLTAMVRDVLAANADVPLSVTEISREIPGRSSGAINA
SCEAMTSRGEVSLVEGRPKRYRITAAGLALTTTAAASTGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44279; Mature: 44147

Theoretical pI: Translated: 3.96; Mature: 3.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDEKTPAVDPDAARVLEILRDHEGPATASEMRVAAGMTVPQLRPVLDRLADAGLVLASQ
CCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEC
RDGARGRPWQWALIPTLDDAPTADDATASDPPPTDTSAPVDDAVPADDTVPVMTGPAETV
CCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHC
DTPPDPVAAPDPATTEISASDPAQRLPTGTADPERQAASPGDALEATALTVPTHGPAEDV
CCCCCCCCCCCCCCCEECCCCCHHHCCCCCCCHHHHCCCCCCCCEEEEEECCCCCCHHCC
SAPDPATADLSTVEPVETETDPSPVADLPDTDPPMQEPPTDQDRHLGTSAPLDAARAVTA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHC
SEPAQDPAPEEDPAPPNAPADSTVPGESADTSAHADEPTGIAAAPGGQAIQAPPDGIPSA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEECCCCCCCCCC
AGDGAGTAGCAAWACPAPQCPIRAGGPPPTSGPQPSRRRAPAKAPRPAGDRAVNGDGQPR
CCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCC
LPSGGLTAMVRDVLAANADVPLSVTEISREIPGRSSGAINASCEAMTSRGEVSLVEGRPK
CCCCCHHHHHHHHHHCCCCCCEEHHHHHHHCCCCCCCCCCCHHHHHHCCCCEEEECCCCC
RYRITAAGLALTTTAAASTGS
EEEEEECCEEEEHHHHCCCCC
>Mature Secondary Structure 
TDEKTPAVDPDAARVLEILRDHEGPATASEMRVAAGMTVPQLRPVLDRLADAGLVLASQ
CCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEC
RDGARGRPWQWALIPTLDDAPTADDATASDPPPTDTSAPVDDAVPADDTVPVMTGPAETV
CCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHC
DTPPDPVAAPDPATTEISASDPAQRLPTGTADPERQAASPGDALEATALTVPTHGPAEDV
CCCCCCCCCCCCCCCEECCCCCHHHCCCCCCCHHHHCCCCCCCCEEEEEECCCCCCHHCC
SAPDPATADLSTVEPVETETDPSPVADLPDTDPPMQEPPTDQDRHLGTSAPLDAARAVTA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHC
SEPAQDPAPEEDPAPPNAPADSTVPGESADTSAHADEPTGIAAAPGGQAIQAPPDGIPSA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEECCCCCCCCCC
AGDGAGTAGCAAWACPAPQCPIRAGGPPPTSGPQPSRRRAPAKAPRPAGDRAVNGDGQPR
CCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCC
LPSGGLTAMVRDVLAANADVPLSVTEISREIPGRSSGAINASCEAMTSRGEVSLVEGRPK
CCCCCHHHHHHHHHHCCCCCCEEHHHHHHHCCCCCCCCCCCHHHHHHCCCCEEEECCCCC
RYRITAAGLALTTTAAASTGS
EEEEEECCEEEEHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA