Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158318469

Identifier: 158318469

GI number: 158318469

Start: 8194654

End: 8196183

Strand: Direct

Name: 158318469

Synonym: Franean1_6737

Alternate gene names: NA

Gene position: 8194654-8196183 (Clockwise)

Preceding gene: 158318467

Following gene: 158318470

Centisome position: 91.23

GC content: 68.95

Gene sequence:

>1530_bases
TTGCGGTTGTGGGCCCGTGTTCGAGGGCCGGGTGGGGCCTGTCCAGGCTGCGGGGTGGTCTCGGAGCGGGTGCATGGCCG
GTATCGGCGGCGGTTGGTCGATGCTGCCATCGGGGGTACCCACGTCGAGATCGATCTGCTGGTCCGGCGGTTCCGTTGCC
TGGACTCGGGATGTTCGAGGGTGACGTTCGCGGAGCAGGTCGTGGGTCTGACGAGTCCACATGCCCGGTTCACCCCACTC
GCCACCGGGATGATCGAGGCGATCGGGTTGGCGCTGGCGGGCAGGGCCGGTTCGCGTCTCGCCGGGCGGGTGGGGCTGTG
TGCTGGCCGGAACACGGTGCTGCGTCGGGTGCGGGCGTTACCCGATCCGCAGGTGGGTGTCGTGGCGACCCTCGGTGTGG
ACGATTTCGCGGTGCGTCGGGGCCGGGTCTACGGAACGGTCCTGGTCGATCTGGACCGTCACCGGCCGGTGGACCTGCTC
GCGGATCGGGAGGCAGCGACGTTCGCCGGCTGGCTGGCCGAGCATCCCGGTGCGCAGGTGATCTGCCGGGATCGGGCCGG
TGCCTACGCCGACGGTGCCCGTACCGGTGCACCGGACGCGGTGGAAGTGGCTGACAGGTGGCATCTGTGGCACAACCTCG
CCGGGCACGTCGAGGCGACTGTCGCCCGCCATCGTTCCTGCCTGAAAGAACCCTCCCTGCCGGCCGTCGAGGCCGTCGCG
AGCCAGCCGAGCGACGTCGACGAGGCGGTAACCGAGGCGCGGGACGAGCACTTCGAGAGCCGGGCGTTCGTGCGCAACGC
CCGCGAGCGGTATGCCGCCGTCCAGGACCTCAAAGCGCAGGGCCTGGGCATCAAGCCGATCATGCGGGAGCTGGGGCTGG
CGAAGGAAACGGTCCGCAAGTACTACCGCGCGGCCACCATCGAGGACGTCCTGGCCAAGACCCGCGACGGACGCGGCTCG
GTCCTACGGCGGTGGGAGCCCTACCTCAACGAGCGGGTGAATGCTGGGATCACCAATGGCAGCCAGCTGTTTCGGGAGAT
CCGCGAGCAGGGCTACCCCGGAAGCCAGGCCACCGTCCTGGCTTACCTCCGCCTGCTGCGCACCGCCGGCAGCACCGCAC
CCGCAGCGTCGCCGGCGCCGAAGGTCCGCACCGTGACCCGGTGGGTCCTCACCGATCCCGAACACCTCGACGAGGAGGAA
ACCCTCGCGTTGAAGAAGGTTCTCACCCGCTGCCAGCACCTGCAGACCCTCGCGGGCCATGTCACCGCGTTCGCGCAGAT
GCTCACCGGACGCCACGGCGACCGGCTCAACACCTGGATCGCCGCCGTCGACGCCGACGACCTCCCTGAACTGCACCGTT
TCACCCGCGGCCTGCTCCGCGACCACGACGCCGTCCTCAACGGACTGACCCTGCCGCACAGCTCCGGACAAGTTGAAGGC
ACCGTGAACCGCATCAAAATGATCAAACGTCAGATGTACGGCAGAGCGAACTTCGACCTCCTCCGCAAACGCGTCCTGCT
CGCGACCTGA

Upstream 100 bases:

>100_bases
CCTGCTGTGATCATGTGCCGGGTGCCTCTCTGACCTTGGGGTCCTGCTTCCGCATCTGGCGGGTCTGATCGTCGACCGCG
TCGACCGGACTGGTGATCGC

Downstream 100 bases:

>100_bases
CCGCCGCCCGGGTCCACTTCGATCACAAGATCAGGGCCAGATCCACTTGAATCCCGTAGAGCCACCGTGTCCTGATCCAG
CTACGCGACGCCGACGGCCA

Product: transposase IS204/IS1001/IS1096/IS1165 family protein

Products: NA

Alternate protein names: IS6 Family Transposase; ISL3 Family Transposase; LOW QUALITY PROTEIN Transposase; IS Transposase; Insertion Element; Transposase For Insertion Sequence Element; Transposase Of ISMdi2 ISL3 Family; ISL3 Family ISFsp1-Like Transposase; Transposase Of

Number of amino acids: Translated: 509; Mature: 509

Protein sequence:

>509_residues
MRLWARVRGPGGACPGCGVVSERVHGRYRRRLVDAAIGGTHVEIDLLVRRFRCLDSGCSRVTFAEQVVGLTSPHARFTPL
ATGMIEAIGLALAGRAGSRLAGRVGLCAGRNTVLRRVRALPDPQVGVVATLGVDDFAVRRGRVYGTVLVDLDRHRPVDLL
ADREAATFAGWLAEHPGAQVICRDRAGAYADGARTGAPDAVEVADRWHLWHNLAGHVEATVARHRSCLKEPSLPAVEAVA
SQPSDVDEAVTEARDEHFESRAFVRNARERYAAVQDLKAQGLGIKPIMRELGLAKETVRKYYRAATIEDVLAKTRDGRGS
VLRRWEPYLNERVNAGITNGSQLFREIREQGYPGSQATVLAYLRLLRTAGSTAPAASPAPKVRTVTRWVLTDPEHLDEEE
TLALKKVLTRCQHLQTLAGHVTAFAQMLTGRHGDRLNTWIAAVDADDLPELHRFTRGLLRDHDAVLNGLTLPHSSGQVEG
TVNRIKMIKRQMYGRANFDLLRKRVLLAT

Sequences:

>Translated_509_residues
MRLWARVRGPGGACPGCGVVSERVHGRYRRRLVDAAIGGTHVEIDLLVRRFRCLDSGCSRVTFAEQVVGLTSPHARFTPL
ATGMIEAIGLALAGRAGSRLAGRVGLCAGRNTVLRRVRALPDPQVGVVATLGVDDFAVRRGRVYGTVLVDLDRHRPVDLL
ADREAATFAGWLAEHPGAQVICRDRAGAYADGARTGAPDAVEVADRWHLWHNLAGHVEATVARHRSCLKEPSLPAVEAVA
SQPSDVDEAVTEARDEHFESRAFVRNARERYAAVQDLKAQGLGIKPIMRELGLAKETVRKYYRAATIEDVLAKTRDGRGS
VLRRWEPYLNERVNAGITNGSQLFREIREQGYPGSQATVLAYLRLLRTAGSTAPAASPAPKVRTVTRWVLTDPEHLDEEE
TLALKKVLTRCQHLQTLAGHVTAFAQMLTGRHGDRLNTWIAAVDADDLPELHRFTRGLLRDHDAVLNGLTLPHSSGQVEG
TVNRIKMIKRQMYGRANFDLLRKRVLLAT
>Mature_509_residues
MRLWARVRGPGGACPGCGVVSERVHGRYRRRLVDAAIGGTHVEIDLLVRRFRCLDSGCSRVTFAEQVVGLTSPHARFTPL
ATGMIEAIGLALAGRAGSRLAGRVGLCAGRNTVLRRVRALPDPQVGVVATLGVDDFAVRRGRVYGTVLVDLDRHRPVDLL
ADREAATFAGWLAEHPGAQVICRDRAGAYADGARTGAPDAVEVADRWHLWHNLAGHVEATVARHRSCLKEPSLPAVEAVA
SQPSDVDEAVTEARDEHFESRAFVRNARERYAAVQDLKAQGLGIKPIMRELGLAKETVRKYYRAATIEDVLAKTRDGRGS
VLRRWEPYLNERVNAGITNGSQLFREIREQGYPGSQATVLAYLRLLRTAGSTAPAASPAPKVRTVTRWVLTDPEHLDEEE
TLALKKVLTRCQHLQTLAGHVTAFAQMLTGRHGDRLNTWIAAVDADDLPELHRFTRGLLRDHDAVLNGLTLPHSSGQVEG
TVNRIKMIKRQMYGRANFDLLRKRVLLAT

Specific function: Unknown

COG id: COG3464

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55951; Mature: 55951

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLWARVRGPGGACPGCGVVSERVHGRYRRRLVDAAIGGTHVEIDLLVRRFRCLDSGCSR
CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCH
VTFAEQVVGLTSPHARFTPLATGMIEAIGLALAGRAGSRLAGRVGLCAGRNTVLRRVRAL
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHCC
PDPQVGVVATLGVDDFAVRRGRVYGTVLVDLDRHRPVDLLADREAATFAGWLAEHPGAQV
CCCCCCEEEEECCCHHHHHCCCEEEEEEEEECCCCCHHHHCCCCHHHHHHHHHHCCCCEE
ICRDRAGAYADGARTGAPDAVEVADRWHLWHNLAGHVEATVARHRSCLKEPSLPAVEAVA
EEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
SQPSDVDEAVTEARDEHFESRAFVRNARERYAAVQDLKAQGLGIKPIMRELGLAKETVRK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHH
YYRAATIEDVLAKTRDGRGSVLRRWEPYLNERVNAGITNGSQLFREIREQGYPGSQATVL
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHH
AYLRLLRTAGSTAPAASPAPKVRTVTRWVLTDPEHLDEEETLALKKVLTRCQHLQTLAGH
HHHHHHHHCCCCCCCCCCCCCHHHHHHHEECCHHHCCHHHHHHHHHHHHHHHHHHHHHHH
VTAFAQMLTGRHGDRLNTWIAAVDADDLPELHRFTRGLLRDHDAVLNGLTLPHSSGQVEG
HHHHHHHHHCCCCCCHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
TVNRIKMIKRQMYGRANFDLLRKRVLLAT
HHHHHHHHHHHHCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MRLWARVRGPGGACPGCGVVSERVHGRYRRRLVDAAIGGTHVEIDLLVRRFRCLDSGCSR
CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCH
VTFAEQVVGLTSPHARFTPLATGMIEAIGLALAGRAGSRLAGRVGLCAGRNTVLRRVRAL
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHCC
PDPQVGVVATLGVDDFAVRRGRVYGTVLVDLDRHRPVDLLADREAATFAGWLAEHPGAQV
CCCCCCEEEEECCCHHHHHCCCEEEEEEEEECCCCCHHHHCCCCHHHHHHHHHHCCCCEE
ICRDRAGAYADGARTGAPDAVEVADRWHLWHNLAGHVEATVARHRSCLKEPSLPAVEAVA
EEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
SQPSDVDEAVTEARDEHFESRAFVRNARERYAAVQDLKAQGLGIKPIMRELGLAKETVRK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHH
YYRAATIEDVLAKTRDGRGSVLRRWEPYLNERVNAGITNGSQLFREIREQGYPGSQATVL
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHH
AYLRLLRTAGSTAPAASPAPKVRTVTRWVLTDPEHLDEEETLALKKVLTRCQHLQTLAGH
HHHHHHHHCCCCCCCCCCCCCHHHHHHHEECCHHHCCHHHHHHHHHHHHHHHHHHHHHHH
VTAFAQMLTGRHGDRLNTWIAAVDADDLPELHRFTRGLLRDHDAVLNGLTLPHSSGQVEG
HHHHHHHHHCCCCCCHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
TVNRIKMIKRQMYGRANFDLLRKRVLLAT
HHHHHHHHHHHHCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA