Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158318434

Identifier: 158318434

GI number: 158318434

Start: 8139663

End: 8140340

Strand: Direct

Name: 158318434

Synonym: Franean1_6702

Alternate gene names: NA

Gene position: 8139663-8140340 (Clockwise)

Preceding gene: 158318433

Following gene: 158318435

Centisome position: 90.62

GC content: 72.71

Gene sequence:

>678_bases
ATGCGTGTGACGAAGCGCCGCGCGTCGCTGTGGCGGCATCCGGTGCTGACACCCGGCTACGCGGCGGCGATCGCGTTCGG
TGCCGTCGCCCTGTCGGGCGTCGTCGTGCCGGCGGCGTCGCAGTCGCCGGTCACCGACAAGCCGGAGCGGGTCACCGGCA
CCGTGGCCGGGGCGCCGGGCTTCCGGCTGCCTGCCGGCCTGACCGTCCAGATCCGGCACGGCGCGGCCATGCTGGCCGAA
GCCGAGATCGACACGCAGGGCCGGTGGTCCGTGGACGTCGTTCCCGGCGACCACGAGGTGTGCGTGGTGCCGCCGGCGGC
ACCGGTGCGGGTGGCCGGGTCGGACCCGGCGTCGGTGTGCAGCCGGGAGCGGATAGCCGCCGGCACCCCGACCAAGGTGA
CCCTCGAGCAGGTCCAGGTGGTCGCGAAGTGGACCGGCGAGGACGGCTCATTCCCGACCGACAGCCAGGTCACGATCAGC
TACGCGCAGCGCGACCTGGCCAGCAAGGCCCTCGACCTGAACGGACGGTTCACGCCGTCCGAGCTGCCGCTGAACGCGGT
GGTCTGCCTGGACCCGCCGACCGGTTGGTGGTTCGCCGACACGAAGACCCGCAGCCAGCAGTGCCAGTCGGTCACCAACC
CGGCCGCCGACGTGCTGTTCCGCCTGGAGAAGTCATGA

Upstream 100 bases:

>100_bases
TCGTCCGCGTCGGCGGGAGCTACTCCGACGGCGAGGGCTTCACGGTGGTCGTCTCCGCCCCGAACCAGTCCGGCTCGGGC
AGCGTCAACTACCCGTTCAC

Downstream 100 bases:

>100_bases
CGGGGCGGGCCGCGGCGGGACGAGCGGGGCGGGTCCCGCTGCTCGCGGCCTCGGCGCTCGTCGCGGCCGGGCTCGGCTGG
GCCCTGCTGTTCCGGGATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MRVTKRRASLWRHPVLTPGYAAAIAFGAVALSGVVVPAASQSPVTDKPERVTGTVAGAPGFRLPAGLTVQIRHGAAMLAE
AEIDTQGRWSVDVVPGDHEVCVVPPAAPVRVAGSDPASVCSRERIAAGTPTKVTLEQVQVVAKWTGEDGSFPTDSQVTIS
YAQRDLASKALDLNGRFTPSELPLNAVVCLDPPTGWWFADTKTRSQQCQSVTNPAADVLFRLEKS

Sequences:

>Translated_225_residues
MRVTKRRASLWRHPVLTPGYAAAIAFGAVALSGVVVPAASQSPVTDKPERVTGTVAGAPGFRLPAGLTVQIRHGAAMLAE
AEIDTQGRWSVDVVPGDHEVCVVPPAAPVRVAGSDPASVCSRERIAAGTPTKVTLEQVQVVAKWTGEDGSFPTDSQVTIS
YAQRDLASKALDLNGRFTPSELPLNAVVCLDPPTGWWFADTKTRSQQCQSVTNPAADVLFRLEKS
>Mature_225_residues
MRVTKRRASLWRHPVLTPGYAAAIAFGAVALSGVVVPAASQSPVTDKPERVTGTVAGAPGFRLPAGLTVQIRHGAAMLAE
AEIDTQGRWSVDVVPGDHEVCVVPPAAPVRVAGSDPASVCSRERIAAGTPTKVTLEQVQVVAKWTGEDGSFPTDSQVTIS
YAQRDLASKALDLNGRFTPSELPLNAVVCLDPPTGWWFADTKTRSQQCQSVTNPAADVLFRLEKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23794; Mature: 23794

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVTKRRASLWRHPVLTPGYAAAIAFGAVALSGVVVPAASQSPVTDKPERVTGTVAGAPG
CCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCEEEEEECCCC
FRLPAGLTVQIRHGAAMLAEAEIDTQGRWSVDVVPGDHEVCVVPPAAPVRVAGSDPASVC
CCCCCCCEEEEECCEEEEEEECCCCCCCEEEEEECCCCCEEEECCCCCEEECCCCHHHHH
SRERIAAGTPTKVTLEQVQVVAKWTGEDGSFPTDSQVTISYAQRDLASKALDLNGRFTPS
CCHHHCCCCCCEEEHHHEEEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCC
ELPLNAVVCLDPPTGWWFADTKTRSQQCQSVTNPAADVLFRLEKS
CCCCEEEEEECCCCCCEEECCCHHHHHHHHHCCCHHHHHEEECCC
>Mature Secondary Structure
MRVTKRRASLWRHPVLTPGYAAAIAFGAVALSGVVVPAASQSPVTDKPERVTGTVAGAPG
CCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCEEEEEECCCC
FRLPAGLTVQIRHGAAMLAEAEIDTQGRWSVDVVPGDHEVCVVPPAAPVRVAGSDPASVC
CCCCCCCEEEEECCEEEEEEECCCCCCCEEEEEECCCCCEEEECCCCCEEECCCCHHHHH
SRERIAAGTPTKVTLEQVQVVAKWTGEDGSFPTDSQVTISYAQRDLASKALDLNGRFTPS
CCHHHCCCCCCEEEHHHEEEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCC
ELPLNAVVCLDPPTGWWFADTKTRSQQCQSVTNPAADVLFRLEKS
CCCCEEEEEECCCCCCEEECCCHHHHHHHHHCCCHHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA