| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318433
Identifier: 158318433
GI number: 158318433
Start: 8139133
End: 8139672
Strand: Direct
Name: 158318433
Synonym: Franean1_6701
Alternate gene names: NA
Gene position: 8139133-8139672 (Clockwise)
Preceding gene: 158318432
Following gene: 158318434
Centisome position: 90.62
GC content: 71.11
Gene sequence:
>540_bases ATGTGCCCGGGGCCGGCCCGGCCGAGACTCCCTCCCATGAAGGCCGTCCTGACCGGGTTCGCGTGCGTTCTCGCCGTGAT CGTCGTACTCGTGGTCGTCCGCGGCCAGATCGACACCGACTCGGGCTCGTCCGGTCTCGGCAGCGGTACGGGGGGGCCGG GACCGGGCGGGCAGCCGGTCGTCACGACGAGCGTGACGCCGGAGGTGACCGCAACCCCGGACGTCACGCCAAGCGCGACG CCGGACTCGACGGGAACCCCGACCGTCACACAGCGGGGCACGACCGGCACGGACCGCGTCGACTGCTCGAGCATCGACAG CGAGCTGAAGATCTCCGCCTATGGCGGGATGATCCGCTGGAACGCGGCCTCCGCGTCCGGTGTCTCGGTCAGCCCGTCGT CCGGGTTCCTCGACGAGGGCGAGAGCGAGGTCGTCCGCGTCGGCGGGAGCTACTCCGACGGCGAGGGCTTCACGGTGGTC GTCTCCGCCCCGAACCAGTCCGGCTCGGGCAGCGTCAACTACCCGTTCACATGCGTGTGA
Upstream 100 bases:
>100_bases CCGCCACCCGGTCCATCTCACGGACGGTAGCACCGGCCGTCGGCCCCGGCCTCGGTGTCAGCACTGAGAGAACCGCTCCC GGAAACCAGTACTGGCACGG
Downstream 100 bases:
>100_bases CGAAGCGCCGCGCGTCGCTGTGGCGGCATCCGGTGCTGACACCCGGCTACGCGGCGGCGATCGCGTTCGGTGCCGTCGCC CTGTCGGGCGTCGTCGTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MCPGPARPRLPPMKAVLTGFACVLAVIVVLVVVRGQIDTDSGSSGLGSGTGGPGPGGQPVVTTSVTPEVTATPDVTPSAT PDSTGTPTVTQRGTTGTDRVDCSSIDSELKISAYGGMIRWNAASASGVSVSPSSGFLDEGESEVVRVGGSYSDGEGFTVV VSAPNQSGSGSVNYPFTCV
Sequences:
>Translated_179_residues MCPGPARPRLPPMKAVLTGFACVLAVIVVLVVVRGQIDTDSGSSGLGSGTGGPGPGGQPVVTTSVTPEVTATPDVTPSAT PDSTGTPTVTQRGTTGTDRVDCSSIDSELKISAYGGMIRWNAASASGVSVSPSSGFLDEGESEVVRVGGSYSDGEGFTVV VSAPNQSGSGSVNYPFTCV >Mature_179_residues MCPGPARPRLPPMKAVLTGFACVLAVIVVLVVVRGQIDTDSGSSGLGSGTGGPGPGGQPVVTTSVTPEVTATPDVTPSAT PDSTGTPTVTQRGTTGTDRVDCSSIDSELKISAYGGMIRWNAASASGVSVSPSSGFLDEGESEVVRVGGSYSDGEGFTVV VSAPNQSGSGSVNYPFTCV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17770; Mature: 17770
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCPGPARPRLPPMKAVLTGFACVLAVIVVLVVVRGQIDTDSGSSGLGSGTGGPGPGGQPV CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCE VTTSVTPEVTATPDVTPSATPDSTGTPTVTQRGTTGTDRVDCSSIDSELKISAYGGMIRW EEECCCCCEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEECCCEEEE NAASASGVSVSPSSGFLDEGESEVVRVGGSYSDGEGFTVVVSAPNQSGSGSVNYPFTCV CCCCCCCCEECCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCEEEC >Mature Secondary Structure MCPGPARPRLPPMKAVLTGFACVLAVIVVLVVVRGQIDTDSGSSGLGSGTGGPGPGGQPV CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCE VTTSVTPEVTATPDVTPSATPDSTGTPTVTQRGTTGTDRVDCSSIDSELKISAYGGMIRW EEECCCCCEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEECCCEEEE NAASASGVSVSPSSGFLDEGESEVVRVGGSYSDGEGFTVVVSAPNQSGSGSVNYPFTCV CCCCCCCCEECCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA