Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158318435

Identifier: 158318435

GI number: 158318435

Start: 8140337

End: 8140963

Strand: Direct

Name: 158318435

Synonym: Franean1_6703

Alternate gene names: NA

Gene position: 8140337-8140963 (Clockwise)

Preceding gene: 158318434

Following gene: 158318436

Centisome position: 90.63

GC content: 79.43

Gene sequence:

>627_bases
ATGACGGGGCGGGCCGCGGCGGGACGAGCGGGGCGGGTCCCGCTGCTCGCGGCCTCGGCGCTCGTCGCGGCCGGGCTCGG
CTGGGCCCTGCTGTTCCGGGATCGCCCGTTCGAGACGACGCTCGCCGTGGTACTCGGGTCCGCCGCCGTCGGCACGCTGC
TCGCGGCTCTGCTGGGGCAACCGCTCACGGACCGCGCCCGGCCGCCGGAACCGGACCGCCCGTCGTTCGGGCCGGGCACC
GGCGGCACGCAGCCGCAGACCGCACAGCCGGAGACCGCGCAGCAGCAGACCGGGCAGCCGGAGACCGCGCAGCTCGTGCT
GCCGGTCGGGCGGCCGGCAGGCGGTGCCCCGCCCGCGGGGCAGTGGTGGACCAGGGACGCCCCGCCGGCGGCGGCGCCCG
CCGCCGCGACCGTGCCGGCCCGCCCGGCTCCCCGCGATCTCGGGGAGCTGCGCGACTCAGCCCGCGTCGTGCAGTGCCCG
CGATGCGGCGCGTTCCGCCTCGACGTCCAGCAGACCGGCGCGGGGTATGCGTTCCGCTGCCGTGTCGACGGCCACGAGTG
GGCCTGGCGGCCCGGAACCGCGTGGCCGGTCGCCGTCGTCGCGAGTCGCCGCCGGAGTACCCGTTGA

Upstream 100 bases:

>100_bases
CGCCGACCGGTTGGTGGTTCGCCGACACGAAGACCCGCAGCCAGCAGTGCCAGTCGGTCACCAACCCGGCCGCCGACGTG
CTGTTCCGCCTGGAGAAGTC

Downstream 100 bases:

>100_bases
CCAGGACGCGTCGAGCTCAGGACCGCGTCGGATTCCGGACCGCGCTGACCTTGGGACCGTGTTGACCTTGGGACCGCGCT
GACCTTGGAACTGTGTTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MTGRAAAGRAGRVPLLAASALVAAGLGWALLFRDRPFETTLAVVLGSAAVGTLLAALLGQPLTDRARPPEPDRPSFGPGT
GGTQPQTAQPETAQQQTGQPETAQLVLPVGRPAGGAPPAGQWWTRDAPPAAAPAAATVPARPAPRDLGELRDSARVVQCP
RCGAFRLDVQQTGAGYAFRCRVDGHEWAWRPGTAWPVAVVASRRRSTR

Sequences:

>Translated_208_residues
MTGRAAAGRAGRVPLLAASALVAAGLGWALLFRDRPFETTLAVVLGSAAVGTLLAALLGQPLTDRARPPEPDRPSFGPGT
GGTQPQTAQPETAQQQTGQPETAQLVLPVGRPAGGAPPAGQWWTRDAPPAAAPAAATVPARPAPRDLGELRDSARVVQCP
RCGAFRLDVQQTGAGYAFRCRVDGHEWAWRPGTAWPVAVVASRRRSTR
>Mature_207_residues
TGRAAAGRAGRVPLLAASALVAAGLGWALLFRDRPFETTLAVVLGSAAVGTLLAALLGQPLTDRARPPEPDRPSFGPGTG
GTQPQTAQPETAQQQTGQPETAQLVLPVGRPAGGAPPAGQWWTRDAPPAAAPAAATVPARPAPRDLGELRDSARVVQCPR
CGAFRLDVQQTGAGYAFRCRVDGHEWAWRPGTAWPVAVVASRRRSTR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21645; Mature: 21514

Theoretical pI: Translated: 11.83; Mature: 11.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGRAAAGRAGRVPLLAASALVAAGLGWALLFRDRPFETTLAVVLGSAAVGTLLAALLGQ
CCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCC
PLTDRARPPEPDRPSFGPGTGGTQPQTAQPETAQQQTGQPETAQLVLPVGRPAGGAPPAG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEECCCCCCCCCCCC
QWWTRDAPPAAAPAAATVPARPAPRDLGELRDSARVVQCPRCGAFRLDVQQTGAGYAFRC
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEECCCCCEEEEEHHHCCCCEEEEE
RVDGHEWAWRPGTAWPVAVVASRRRSTR
EECCCCCCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
TGRAAAGRAGRVPLLAASALVAAGLGWALLFRDRPFETTLAVVLGSAAVGTLLAALLGQ
CCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCC
PLTDRARPPEPDRPSFGPGTGGTQPQTAQPETAQQQTGQPETAQLVLPVGRPAGGAPPAG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEECCCCCCCCCCCC
QWWTRDAPPAAAPAAATVPARPAPRDLGELRDSARVVQCPRCGAFRLDVQQTGAGYAFRC
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEECCCCCEEEEEHHHCCCCEEEEE
RVDGHEWAWRPGTAWPVAVVASRRRSTR
EECCCCCCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA