| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is pimA [H]
Identifier: 158318400
GI number: 158318400
Start: 8095408
End: 8096709
Strand: Direct
Name: pimA [H]
Synonym: Franean1_6665
Alternate gene names: 158318400
Gene position: 8095408-8096709 (Clockwise)
Preceding gene: 158318399
Following gene: 158318401
Centisome position: 90.13
GC content: 74.73
Gene sequence:
>1302_bases GTGACGGTGAACGGGGGCGACGGTGAAGCCCCGGTGAGCGGGGGCACGGCAGGCGGGAGCTCGGCGGGCGGCCCGCTCTC AGTGGCGTTGCTGACCTATTCCACCCGGCCCCGCGGCGGGGTGGTGGCCACCCTCGCGCTGGCCGAGGCGCTGGCGCGCG CCGGGCACCGCGTCAGCCTGTGGACGCTGGCCCGCGGCGGGGACGCCGGCTTCTTCCGCCCGGTCGACCCGGCGGTCGAG GTGGTGGCGGTGCCGTTCCCGGAGGTCGCCGACGAGACGGTCGGGAAGCGCATTATACGCTCGATCGCCATCCTCCGGGA TGCCTTAGAGGCGTTTCCCGGCGGGTACGACATCGTGCACGCCCAGGACTGCATCGCCGCGAACGCCGTGGCCGACTGCG TCCGCACTGTCCACCACCTGGACACCTTCACCACCCCCGAGCTCGTCGCCTGCCATGAGCGGGCGCTGCGCCGGCCGTAC GCGCACGTGTGCGTGTCGGCGGCCGTCGCGGTCGAGCTGGCCGCCGGCTGGGGGATCACCGCGACGGTGATCCCGAACGG CGTCGACGCGGCCCGCTTCACCGCGGCTGCCGGCCCGGAGGCTCCCGCCCGCGAGGCCCGCGGGCGCTGGCGTGCCCGGC TCGGCCGGTACGTGCTCGCCGTCGGCGGGATCGAGCCGCGTAAGGGGACCGCCGACCTGGTCGAGGCGTTCGCGCTGCTG CGGGAGCGGGTGACGCCGGTTTCCCTCGTCGTCGCCGGTGGGGAGACCCTGTTCGACTACCGCGGGTACCGCGAGCAGGT GCTGGGCCGGGCCGCGCAACTCGGCGTCGAGCCCGTCATCCTCGGGCCGGTGGCCCACGAGGAGCTGCCCGCCCTGGTCG CGGCGGCGGACGTCTTCGCGTTCCCGTCCGCGAAGGAGGGGTTCGGGCTGGCCGCGCTGGAGGCGCTGGCCGCGGGTGTC CCGGTCGTCACCCGTGACCTGCCGGTGCTACGCGAGGTGCTGGCCGCGGCCGGGGACGCGGTGTGCTTCGCCTCGACGCC GACCGAGTTCGCGGCCGCGCTGGAGGCGTTCCTCGACTCCGCGCAACGGCGGCCGGCCGCGGGCGCCGAGCAGCCGCAGG CGGGAGCGGGCGCCGGACATCCGCGGGTGGCGGCCGGGCGGGCAGTCGCGCGAGGGTACAGCTGGGCGACCGCGGCCGAC CGGCATGTCGCCCTTTACCGCGAACTGATCAGAACACAGGTCACCGGACGGCCGACGCGCCGAATCAGCGTCACCACAGA TAAATCATCCATCTCATTGTAA
Upstream 100 bases:
>100_bases GCGGCCCGCGGGCGTGCCCGGGCCGAGCCACGACGACCTGGTCGGGCTGGCCACCGACGCGCTCGCCCGGGTCGGTGCCC CGGAGCCCCGGTGAGCGGGG
Downstream 100 bases:
>100_bases GAACTTAATGACGGAAAGCGACACACCCGGCCCGGATCCGGTCCGGACGGTCCCACAGGGTGCCGAATCGACTCTGCTCC GTCCGCCACGGCGAGTCGGA
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: Alpha-mannosyltransferase; Guanosine diphosphomannose-phosphatidyl-inositol alpha-mannosyltransferase; Phosphatidylinositol alpha-mannosyltransferase; PI alpha-mannosyltransferase [H]
Number of amino acids: Translated: 433; Mature: 432
Protein sequence:
>433_residues MTVNGGDGEAPVSGGTAGGSSAGGPLSVALLTYSTRPRGGVVATLALAEALARAGHRVSLWTLARGGDAGFFRPVDPAVE VVAVPFPEVADETVGKRIIRSIAILRDALEAFPGGYDIVHAQDCIAANAVADCVRTVHHLDTFTTPELVACHERALRRPY AHVCVSAAVAVELAAGWGITATVIPNGVDAARFTAAAGPEAPAREARGRWRARLGRYVLAVGGIEPRKGTADLVEAFALL RERVTPVSLVVAGGETLFDYRGYREQVLGRAAQLGVEPVILGPVAHEELPALVAAADVFAFPSAKEGFGLAALEALAAGV PVVTRDLPVLREVLAAAGDAVCFASTPTEFAAALEAFLDSAQRRPAAGAEQPQAGAGAGHPRVAAGRAVARGYSWATAAD RHVALYRELIRTQVTGRPTRRISVTTDKSSISL
Sequences:
>Translated_433_residues MTVNGGDGEAPVSGGTAGGSSAGGPLSVALLTYSTRPRGGVVATLALAEALARAGHRVSLWTLARGGDAGFFRPVDPAVE VVAVPFPEVADETVGKRIIRSIAILRDALEAFPGGYDIVHAQDCIAANAVADCVRTVHHLDTFTTPELVACHERALRRPY AHVCVSAAVAVELAAGWGITATVIPNGVDAARFTAAAGPEAPAREARGRWRARLGRYVLAVGGIEPRKGTADLVEAFALL RERVTPVSLVVAGGETLFDYRGYREQVLGRAAQLGVEPVILGPVAHEELPALVAAADVFAFPSAKEGFGLAALEALAAGV PVVTRDLPVLREVLAAAGDAVCFASTPTEFAAALEAFLDSAQRRPAAGAEQPQAGAGAGHPRVAAGRAVARGYSWATAAD RHVALYRELIRTQVTGRPTRRISVTTDKSSISL >Mature_432_residues TVNGGDGEAPVSGGTAGGSSAGGPLSVALLTYSTRPRGGVVATLALAEALARAGHRVSLWTLARGGDAGFFRPVDPAVEV VAVPFPEVADETVGKRIIRSIAILRDALEAFPGGYDIVHAQDCIAANAVADCVRTVHHLDTFTTPELVACHERALRRPYA HVCVSAAVAVELAAGWGITATVIPNGVDAARFTAAAGPEAPAREARGRWRARLGRYVLAVGGIEPRKGTADLVEAFALLR ERVTPVSLVVAGGETLFDYRGYREQVLGRAAQLGVEPVILGPVAHEELPALVAAADVFAFPSAKEGFGLAALEALAAGVP VVTRDLPVLREVLAAAGDAVCFASTPTEFAAALEAFLDSAQRRPAAGAEQPQAGAGAGHPRVAAGRAVARGYSWATAADR HVALYRELIRTQVTGRPTRRISVTTDKSSISL
Specific function: Catalyzes the addition of a mannose residue from GDP-D- mannose to the position 2 of a phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Contrary to pimB, the mannosyltransferase pim
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: =2.4.1.57 [H]
Molecular weight: Translated: 44813; Mature: 44682
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.2 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVNGGDGEAPVSGGTAGGSSAGGPLSVALLTYSTRPRGGVVATLALAEALARAGHRVSL CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEE WTLARGGDAGFFRPVDPAVEVVAVPFPEVADETVGKRIIRSIAILRDALEAFPGGYDIVH EEEECCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE AQDCIAANAVADCVRTVHHLDTFTTPELVACHERALRRPYAHVCVSAAVAVELAAGWGIT HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCEE ATVIPNGVDAARFTAAAGPEAPAREARGRWRARLGRYVLAVGGIEPRKGTADLVEAFALL EEECCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHH RERVTPVSLVVAGGETLFDYRGYREQVLGRAAQLGVEPVILGPVAHEELPALVAAADVFA HHCCCCEEEEEECCCHHHHHCCHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHC FPSAKEGFGLAALEALAAGVPVVTRDLPVLREVLAAAGDAVCFASTPTEFAAALEAFLDS CCCCCCCCCHHHHHHHHCCCCHHHCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHH AQRRPAAGAEQPQAGAGAGHPRVAAGRAVARGYSWATAADRHVALYRELIRTQVTGRPTR HHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCE RISVTTDKSSISL EEEEEECCCCCCC >Mature Secondary Structure TVNGGDGEAPVSGGTAGGSSAGGPLSVALLTYSTRPRGGVVATLALAEALARAGHRVSL CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEE WTLARGGDAGFFRPVDPAVEVVAVPFPEVADETVGKRIIRSIAILRDALEAFPGGYDIVH EEEECCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE AQDCIAANAVADCVRTVHHLDTFTTPELVACHERALRRPYAHVCVSAAVAVELAAGWGIT HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCEE ATVIPNGVDAARFTAAAGPEAPAREARGRWRARLGRYVLAVGGIEPRKGTADLVEAFALL EEECCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHH RERVTPVSLVVAGGETLFDYRGYREQVLGRAAQLGVEPVILGPVAHEELPALVAAADVFA HHCCCCEEEEEECCCHHHHHCCHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHC FPSAKEGFGLAALEALAAGVPVVTRDLPVLREVLAAAGDAVCFASTPTEFAAALEAFLDS CCCCCCCCCHHHHHHHHCCCCHHHCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHH AQRRPAAGAEQPQAGAGAGHPRVAAGRAVARGYSWATAADRHVALYRELIRTQVTGRPTR HHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCE RISVTTDKSSISL EEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12068013 [H]