Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158318377

Identifier: 158318377

GI number: 158318377

Start: 8071819

End: 8072316

Strand: Direct

Name: 158318377

Synonym: Franean1_6642

Alternate gene names: NA

Gene position: 8071819-8072316 (Clockwise)

Preceding gene: 158318373

Following gene: 158318378

Centisome position: 89.87

GC content: 69.08

Gene sequence:

>498_bases
ATGGGTTGGACGGCCGCCGGCACGGCGCCCGACGCCGGTGCCAAGAGAGGAAATCGACCCGTGAGCACTCTGCCGCAGGA
ACTGAGGGACCTCATCGAGTCCGGTCCGATGGCCCACCTGACCACCATCAACGCCGACGGCAGCCCGCAGGTGACGGTCA
TCTGGATCGGCCTGGACGGCGACGGGATCGTCACCGGGCACATGTCGAAACAGGTGAAGCTACGCAACATCGAGCGTGAC
CCGCGGGTCGTGTTGTCCTTCGACGCCCCGCGGGTGCCGGGCGCCTTCCTGAACCAGTACGCCGTGGTGCGGGCACGGGC
GACGGTCACGCCGAGCGATGACACCTGGGACCTGCTCAACCGCCTGGCGAAGGTCTACATCTCGCCGGACGCCGAGTTCC
CGGTGCCGCGGGGCCCGGGATTCATTGTGCGTTACGCCGTGGAGCGCGTCAGTGGTGTCGGCCCGTGGGTACCGGCGGCC
GGCTCGGCCGCCCACTGA

Upstream 100 bases:

>100_bases
CGCGAGCGGGCAGGCTCGAACAGGACGATCAAAAACGGCGCGGACGACCAGCCCAAGCAGCCTGGGCCGCTGAACGGACG
GGATAGGTTGGATGGGTTGG

Downstream 100 bases:

>100_bases
TCAGACATCCGAACGCCGCGTTGACGACCGTCGCGTAGTCGCGTCGTCGCGACCGCGCATTTTACGAGAGCAGGAGGTCG
GCCCGTGTCTCGTGTACGAG

Product: pyridoxamine 5'-phosphate oxidase-like protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MGWTAAGTAPDAGAKRGNRPVSTLPQELRDLIESGPMAHLTTINADGSPQVTVIWIGLDGDGIVTGHMSKQVKLRNIERD
PRVVLSFDAPRVPGAFLNQYAVVRARATVTPSDDTWDLLNRLAKVYISPDAEFPVPRGPGFIVRYAVERVSGVGPWVPAA
GSAAH

Sequences:

>Translated_165_residues
MGWTAAGTAPDAGAKRGNRPVSTLPQELRDLIESGPMAHLTTINADGSPQVTVIWIGLDGDGIVTGHMSKQVKLRNIERD
PRVVLSFDAPRVPGAFLNQYAVVRARATVTPSDDTWDLLNRLAKVYISPDAEFPVPRGPGFIVRYAVERVSGVGPWVPAA
GSAAH
>Mature_164_residues
GWTAAGTAPDAGAKRGNRPVSTLPQELRDLIESGPMAHLTTINADGSPQVTVIWIGLDGDGIVTGHMSKQVKLRNIERDP
RVVLSFDAPRVPGAFLNQYAVVRARATVTPSDDTWDLLNRLAKVYISPDAEFPVPRGPGFIVRYAVERVSGVGPWVPAAG
SAAH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17633; Mature: 17502

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGWTAAGTAPDAGAKRGNRPVSTLPQELRDLIESGPMAHLTTINADGSPQVTVIWIGLDG
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEEEECC
DGIVTGHMSKQVKLRNIERDPRVVLSFDAPRVPGAFLNQYAVVRARATVTPSDDTWDLLN
CEEEECCCCCEEEEECCCCCCCEEEEECCCCCCHHHHHHEEEEEEEEEECCCCCHHHHHH
RLAKVYISPDAEFPVPRGPGFIVRYAVERVSGVGPWVPAAGSAAH
HHHHEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GWTAAGTAPDAGAKRGNRPVSTLPQELRDLIESGPMAHLTTINADGSPQVTVIWIGLDG
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEEEECC
DGIVTGHMSKQVKLRNIERDPRVVLSFDAPRVPGAFLNQYAVVRARATVTPSDDTWDLLN
CEEEECCCCCEEEEECCCCCCCEEEEECCCCCCHHHHHHEEEEEEEEEECCCCCHHHHHH
RLAKVYISPDAEFPVPRGPGFIVRYAVERVSGVGPWVPAAGSAAH
HHHHEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA