| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318373
Identifier: 158318373
GI number: 158318373
Start: 8069126
End: 8069791
Strand: Direct
Name: 158318373
Synonym: Franean1_6638
Alternate gene names: NA
Gene position: 8069126-8069791 (Clockwise)
Preceding gene: 158318371
Following gene: 158318377
Centisome position: 89.84
GC content: 73.57
Gene sequence:
>666_bases ATGCGGATCGGGATTCTGGGCACCGGGGCGCTGGCCGAGGGGTTGGGGCGGGCCTGGGTCCAGGCCGGGCACGAGGTGGT GATCGGCGGTCGATCGCGCGCCAAGGCGGATGCGCTCGCGGAACGCCTGGGCGCAACGACGCGGGCGGCCGCCCCACGCG CGGCTGTCGCCGAGCGCGACGCGGTACTGCTGGCCGTGCTGTGGACCGGTGTCGAGGATGTCCTGCGCAGCGCGGGCGCG GACGAGGGAACGCTGGCGGGAGTTCCGTTGATCGACCCGACAAACGCGGTCGAGCACGGCGTCGGCGTCCTGCTCACCGA GCAGGGCGACTCGGCCGCGGCCCGGATCGCCGCGGCGGCTCCTGGAGCGCAGGTCGTGAAGGCGTTCCACCTTTATCCCG CCGCCCAGTGGGCACGGCCGCCGGCCGGCGGCGCCGGTGCGGACACATCAGCGCCCACAGTGGCGATCTGCGGCGATGAC GAGGCGGCGCTGCGGGTCGTGAGCGATCTCGTCCGGGACGTCGGCGGCGTACCGGCCACGCTGGGAACGCTGGTCCGCGC ACGTCAGCTCGAGGAGGTCGCGGGCTTCGTCATCGGGCTGGCGTTCGCGGGCTTTGATCCGGCTTCGGCCATCCCCCGTG TACCGACGGGAACAGTGTCCGCCTAG
Upstream 100 bases:
>100_bases CGCCTTACGGTCTCGGTCCTAGGCGATCGCGTCGAACGCGGTTGACGCGGTCGACGCGGTCGACGCGGTCGACGCGCACA AGCACGCACGAGGAGGAACC
Downstream 100 bases:
>100_bases CCGAAGACGGAAACGGTCAGCCGGCCGAGCCGCCGGCGATCGTGTAGCTCCACAGCTCGCTGTGCACGCCAACCGGCCTG GGCGCCTCGCCGCCGGCGCG
Product: NADP oxidoreductase coenzyme F420-dependent
Products: NA
Alternate protein names: NADPH-Dependent; Transmembrane Oxidoreductase; Reductase
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MRIGILGTGALAEGLGRAWVQAGHEVVIGGRSRAKADALAERLGATTRAAAPRAAVAERDAVLLAVLWTGVEDVLRSAGA DEGTLAGVPLIDPTNAVEHGVGVLLTEQGDSAAARIAAAAPGAQVVKAFHLYPAAQWARPPAGGAGADTSAPTVAICGDD EAALRVVSDLVRDVGGVPATLGTLVRARQLEEVAGFVIGLAFAGFDPASAIPRVPTGTVSA
Sequences:
>Translated_221_residues MRIGILGTGALAEGLGRAWVQAGHEVVIGGRSRAKADALAERLGATTRAAAPRAAVAERDAVLLAVLWTGVEDVLRSAGA DEGTLAGVPLIDPTNAVEHGVGVLLTEQGDSAAARIAAAAPGAQVVKAFHLYPAAQWARPPAGGAGADTSAPTVAICGDD EAALRVVSDLVRDVGGVPATLGTLVRARQLEEVAGFVIGLAFAGFDPASAIPRVPTGTVSA >Mature_221_residues MRIGILGTGALAEGLGRAWVQAGHEVVIGGRSRAKADALAERLGATTRAAAPRAAVAERDAVLLAVLWTGVEDVLRSAGA DEGTLAGVPLIDPTNAVEHGVGVLLTEQGDSAAARIAAAAPGAQVVKAFHLYPAAQWARPPAGGAGADTSAPTVAICGDD EAALRVVSDLVRDVGGVPATLGTLVRARQLEEVAGFVIGLAFAGFDPASAIPRVPTGTVSA
Specific function: Unknown
COG id: COG2085
COG function: function code R; Predicted dinucleotide-binding enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI100815815, Length=190, Percent_Identity=28.9473684210526, Blast_Score=69, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22031; Mature: 22031
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIGILGTGALAEGLGRAWVQAGHEVVIGGRSRAKADALAERLGATTRAAAPRAAVAERD CEEEEEECHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHCCHHHHCCCHHHHHHCC AVLLAVLWTGVEDVLRSAGADEGTLAGVPLIDPTNAVEHGVGVLLTEQGDSAAARIAAAA HHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCEEEEECCCCHHHHHHHHCC PGAQVVKAFHLYPAAQWARPPAGGAGADTSAPTVAICGDDEAALRVVSDLVRDVGGVPAT CHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCHH LGTLVRARQLEEVAGFVIGLAFAGFDPASAIPRVPTGTVSA HHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCC >Mature Secondary Structure MRIGILGTGALAEGLGRAWVQAGHEVVIGGRSRAKADALAERLGATTRAAAPRAAVAERD CEEEEEECHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHCCHHHHCCCHHHHHHCC AVLLAVLWTGVEDVLRSAGADEGTLAGVPLIDPTNAVEHGVGVLLTEQGDSAAARIAAAA HHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCEEEEECCCCHHHHHHHHCC PGAQVVKAFHLYPAAQWARPPAGGAGADTSAPTVAICGDDEAALRVVSDLVRDVGGVPAT CHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCHH LGTLVRARQLEEVAGFVIGLAFAGFDPASAIPRVPTGTVSA HHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA