| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is ytfG [C]
Identifier: 158318371
GI number: 158318371
Start: 8067648
End: 8068541
Strand: Direct
Name: ytfG [C]
Synonym: Franean1_6636
Alternate gene names: 158318371
Gene position: 8067648-8068541 (Clockwise)
Preceding gene: 158318368
Following gene: 158318373
Centisome position: 89.82
GC content: 72.26
Gene sequence:
>894_bases ATGCCGACGCCCGATCGGACCATCCTCGTCACCGGGGCCACCGGCCAGCAGGGCGGGGCCACCGCGCGACGTCTCCTGGC CGACGGATGGCGGGTGCGGGCGCTGGTCCGCGACCCCGCCGGGCCGGCGGCGCGGCGGCTCGCCCTCGACGGCGCCGAAC TGGTGACCGGTGACCTGGACGACCGGGACGCGCTGGCCGCCGCCACCGAGGGCGTGTACGGGGTGTTCAGTGTTCAGCCG GCAAGCCACGCCCCCCATTTCGTCGAGGGGGAGGAAAGGTACGGCGTCAACGTCGCCGACGCGGCCAGGAACGCCGGGGT CCGGCATCTCGTCTACACCTCCGCGGCCGGTATCGATCGAAACCCGGACGGCCCCGCGGCCTCGAAGGCGCGGATCGAGC GCCACATCCGGGAGCTCGGCCTTCCCGCCACCGTGCTGCGTCCCGTCATGTTCATGGAGAACCACACCGACCCGGTCTTC GGCGTCACCGGCCAGGCCTCGCTGGTCCGGATGATCCCGGCGGGGGTGACGGTTCAGCTCATCGCCGTCACCGACATCGG AGCGTTCGCCGCCCTCGCCTTCGCGGACCCGGCCCGCTATGTGGGTGCGGCGCTGGAGCTGGCTGGCGATGAGTTGACCC GCGAACACCTGATCACCGCGATCAGCCGCGCGACCGGGCGCGACCTTCAGCTGGATCCGCTCCCCCGGGAGACTCTCGTC CAGCTCGGGGTCGACGTCGACGGCCTCGAGCGGGAGAAGTCCTTCAACGGCTGGCAGGCCGACATTCCCGCACTGCGGCG ACTGCACCCGGGGCTGATGGACTTCGAGACGTGGCTGGCGCGGGAAGGCGCGGCCAGATTCGCCGCGCTGTTCGCCGAAC CGGCGAGCCGCTGA
Upstream 100 bases:
>100_bases GGCCAACCGGCTCCTCCATCATTGACATTCGGAGCACCGCTCCATATGTTTCGGAGCACCGCTCCGGAAGATGACCCGAA CCTAACAGAAGGGGCTCCGC
Downstream 100 bases:
>100_bases CACGCCCGGTTCCCGGGGCGTACCCGCATCCGCCGCTCCGGTTTCAGTCAGCGCCGGTACGCGCCTGGAGCTCCGCCGAT CTGTCCTGCGCGTCCTGTAG
Product: NmrA family protein
Products: NA
Alternate protein names: NmrA-Like Family; Oxidoreductase; Nmra Family Protein; Nmra Family Transcriptional Regulator; Nmra-Like Family Protein; NmrA Protein; NmrA-Like Family Protein; ActVA 4 Protein
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MPTPDRTILVTGATGQQGGATARRLLADGWRVRALVRDPAGPAARRLALDGAELVTGDLDDRDALAAATEGVYGVFSVQP ASHAPHFVEGEERYGVNVADAARNAGVRHLVYTSAAGIDRNPDGPAASKARIERHIRELGLPATVLRPVMFMENHTDPVF GVTGQASLVRMIPAGVTVQLIAVTDIGAFAALAFADPARYVGAALELAGDELTREHLITAISRATGRDLQLDPLPRETLV QLGVDVDGLEREKSFNGWQADIPALRRLHPGLMDFETWLAREGAARFAALFAEPASR
Sequences:
>Translated_297_residues MPTPDRTILVTGATGQQGGATARRLLADGWRVRALVRDPAGPAARRLALDGAELVTGDLDDRDALAAATEGVYGVFSVQP ASHAPHFVEGEERYGVNVADAARNAGVRHLVYTSAAGIDRNPDGPAASKARIERHIRELGLPATVLRPVMFMENHTDPVF GVTGQASLVRMIPAGVTVQLIAVTDIGAFAALAFADPARYVGAALELAGDELTREHLITAISRATGRDLQLDPLPRETLV QLGVDVDGLEREKSFNGWQADIPALRRLHPGLMDFETWLAREGAARFAALFAEPASR >Mature_296_residues PTPDRTILVTGATGQQGGATARRLLADGWRVRALVRDPAGPAARRLALDGAELVTGDLDDRDALAAATEGVYGVFSVQPA SHAPHFVEGEERYGVNVADAARNAGVRHLVYTSAAGIDRNPDGPAASKARIERHIRELGLPATVLRPVMFMENHTDPVFG VTGQASLVRMIPAGVTVQLIAVTDIGAFAALAFADPARYVGAALELAGDELTREHLITAISRATGRDLQLDPLPRETLVQ LGVDVDGLEREKSFNGWQADIPALRRLHPGLMDFETWLAREGAARFAALFAEPASR
Specific function: Unknown
COG id: COG0702
COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI10190720, Length=289, Percent_Identity=30.4498269896194, Blast_Score=111, Evalue=7e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31674; Mature: 31543
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTPDRTILVTGATGQQGGATARRLLADGWRVRALVRDPAGPAARRLALDGAELVTGDLD CCCCCCEEEEECCCCCCCCHHHHHHHHCCCEEEEEEECCCCHHHHHHHCCCCCEEECCCC DRDALAAATEGVYGVFSVQPASHAPHFVEGEERYGVNVADAARNAGVRHLVYTSAAGIDR CHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHCCCCHHHHHHCCCCEEEEEECCCCCCC NPDGPAASKARIERHIRELGLPATVLRPVMFMENHTDPVFGVTGQASLVRMIPAGVTVQL CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEECCCCHHHHHHCCCCCEEEE IAVTDIGAFAALAFADPARYVGAALELAGDELTREHLITAISRATGRDLQLDPLPRETLV EEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHH QLGVDVDGLEREKSFNGWQADIPALRRLHPGLMDFETWLAREGAARFAALFAEPASR HHCCCCCCCCHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PTPDRTILVTGATGQQGGATARRLLADGWRVRALVRDPAGPAARRLALDGAELVTGDLD CCCCCEEEEECCCCCCCCHHHHHHHHCCCEEEEEEECCCCHHHHHHHCCCCCEEECCCC DRDALAAATEGVYGVFSVQPASHAPHFVEGEERYGVNVADAARNAGVRHLVYTSAAGIDR CHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHCCCCHHHHHHCCCCEEEEEECCCCCCC NPDGPAASKARIERHIRELGLPATVLRPVMFMENHTDPVFGVTGQASLVRMIPAGVTVQL CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEECCCCHHHHHHCCCCCEEEE IAVTDIGAFAALAFADPARYVGAALELAGDELTREHLITAISRATGRDLQLDPLPRETLV EEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHH QLGVDVDGLEREKSFNGWQADIPALRRLHPGLMDFETWLAREGAARFAALFAEPASR HHCCCCCCCCHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA