| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318313
Identifier: 158318313
GI number: 158318313
Start: 8003748
End: 8004608
Strand: Reverse
Name: 158318313
Synonym: Franean1_6578
Alternate gene names: NA
Gene position: 8004608-8003748 (Counterclockwise)
Preceding gene: 158318314
Following gene: 158318312
Centisome position: 89.12
GC content: 73.29
Gene sequence:
>861_bases GTGACGAGGGCCAGCATCGGCAGCGGCCGGGCCAGCGATTCCGACGGGCCAGCGGGCCCCACCACCGGCCCCACCACCGG CGCCGGCACCGCCGGCAGCGAGCCGCTGGGTCGGCGGTCGCTGCACACCGAGGTCCTGCTCGTCCTCGGGGTGTCCTTCG GTGCCTCCGGCCTGTTCGCGCTCATCCGCTACCTCGGGGTGCTGACCGCGCAGCAGTCGGTCCGCTCGCAGGTCGCGCGG CTCAACTCGTCCGCAGCGCCAGGGCGCCCCTGGCTCGATCTCGCGCTGCAGGCCGCCTCGCTCGCGACCGCGCTGGTACC GGTGTTTCTCGTCGTCCACCTGCTGGGCCGCCACGGCGGCGGGCCCGCGGTGATCGGCCTGGACCGGCGCCGTCCCCGCT CGGACGCCCTCCGTGGCGCGGCGCTGGCGGCGGCGGTCGGGGGCACCGGTCTCGCCTTCTACCTGGTCGCCTGGCACAGC GGCGCCAATCTGACGGTCGCGCCGTCCAACCTGCCGGACGTCTGGTGGCGGATCCCGGTCCTCGTCGCCTCGGCGGCCCA GAACGGTCTGGCCGAGGAGGTGGTGGTCGCCGGGTACCTGCTGGTGCGTCTGCGTGAGCTCGGGTGGGGCGACAATCGCG CGCTCGCCGCCAGCGCGCTGCTGCGCGGCTCCTACCACCTCTACCAGGGGCTGGGGGGATTCGCCGGCAATGTCGCGATG GGGCTGCTGTTCGGTCGGATCTTCCAGCGGACCGGCCGGGTGCTACCGCTCGTCATAGCACACACACTCATCGACACGGT CGCGTTCGTGGGGTATGTGACGCTGGCCGGAAGGGTGTCGTGGATACCCGTTCCCCACTAG
Upstream 100 bases:
>100_bases CCCGAAGTCAAGTCCTGACCGGCGCGGCCGGCCGGCGCGCGGAGGTGCGCGCCGGCCGGCCGGCGCCAGGCGTCCCGCCG CCCGCGACTACCGTCGACGG
Downstream 100 bases:
>100_bases CGTTTCCGCGCTAAGGTTAACAAAAGGCAAACAACGATCGTCCTTTTGGGCGCGAGCTGGGCACGCACCGTCACGGCCCC CGGTACCCCGGGCCACTCGG
Product: abortive infection protein
Products: NA
Alternate protein names: Integral Membrane Protein; CAAX Amino Terminal Protease Family; CAAX Amino Terminal Protease Family Protein; CAAX Amino Protease Family Protein; Protease; CAAX Amino Terminal Protease; CAAX Amino Protease
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MTRASIGSGRASDSDGPAGPTTGPTTGAGTAGSEPLGRRSLHTEVLLVLGVSFGASGLFALIRYLGVLTAQQSVRSQVAR LNSSAAPGRPWLDLALQAASLATALVPVFLVVHLLGRHGGGPAVIGLDRRRPRSDALRGAALAAAVGGTGLAFYLVAWHS GANLTVAPSNLPDVWWRIPVLVASAAQNGLAEEVVVAGYLLVRLRELGWGDNRALAASALLRGSYHLYQGLGGFAGNVAM GLLFGRIFQRTGRVLPLVIAHTLIDTVAFVGYVTLAGRVSWIPVPH
Sequences:
>Translated_286_residues MTRASIGSGRASDSDGPAGPTTGPTTGAGTAGSEPLGRRSLHTEVLLVLGVSFGASGLFALIRYLGVLTAQQSVRSQVAR LNSSAAPGRPWLDLALQAASLATALVPVFLVVHLLGRHGGGPAVIGLDRRRPRSDALRGAALAAAVGGTGLAFYLVAWHS GANLTVAPSNLPDVWWRIPVLVASAAQNGLAEEVVVAGYLLVRLRELGWGDNRALAASALLRGSYHLYQGLGGFAGNVAM GLLFGRIFQRTGRVLPLVIAHTLIDTVAFVGYVTLAGRVSWIPVPH >Mature_285_residues TRASIGSGRASDSDGPAGPTTGPTTGAGTAGSEPLGRRSLHTEVLLVLGVSFGASGLFALIRYLGVLTAQQSVRSQVARL NSSAAPGRPWLDLALQAASLATALVPVFLVVHLLGRHGGGPAVIGLDRRRPRSDALRGAALAAAVGGTGLAFYLVAWHSG ANLTVAPSNLPDVWWRIPVLVASAAQNGLAEEVVVAGYLLVRLRELGWGDNRALAASALLRGSYHLYQGLGGFAGNVAMG LLFGRIFQRTGRVLPLVIAHTLIDTVAFVGYVTLAGRVSWIPVPH
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29585; Mature: 29453
Theoretical pI: Translated: 11.70; Mature: 11.70
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRASIGSGRASDSDGPAGPTTGPTTGAGTAGSEPLGRRSLHTEVLLVLGVSFGASGLFA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHH LIRYLGVLTAQQSVRSQVARLNSSAAPGRPWLDLALQAASLATALVPVFLVVHLLGRHGG HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GPAVIGLDRRRPRSDALRGAALAAAVGGTGLAFYLVAWHSGANLTVAPSNLPDVWWRIPV CCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEECCCCCCHHHHHHHH LVASAAQNGLAEEVVVAGYLLVRLRELGWGDNRALAASALLRGSYHLYQGLGGFAGNVAM HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHCCCHHHHHHH GLLFGRIFQRTGRVLPLVIAHTLIDTVAFVGYVTLAGRVSWIPVPH HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCC >Mature Secondary Structure TRASIGSGRASDSDGPAGPTTGPTTGAGTAGSEPLGRRSLHTEVLLVLGVSFGASGLFA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHH LIRYLGVLTAQQSVRSQVARLNSSAAPGRPWLDLALQAASLATALVPVFLVVHLLGRHGG HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GPAVIGLDRRRPRSDALRGAALAAAVGGTGLAFYLVAWHSGANLTVAPSNLPDVWWRIPV CCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEECCCCCCHHHHHHHH LVASAAQNGLAEEVVVAGYLLVRLRELGWGDNRALAASALLRGSYHLYQGLGGFAGNVAM HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHCCCHHHHHHH GLLFGRIFQRTGRVLPLVIAHTLIDTVAFVGYVTLAGRVSWIPVPH HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA