| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is pksS [H]
Identifier: 158318069
GI number: 158318069
Start: 7686876
End: 7688147
Strand: Direct
Name: pksS [H]
Synonym: Franean1_6329
Alternate gene names: 158318069
Gene position: 7686876-7688147 (Clockwise)
Preceding gene: 158318068
Following gene: 158318070
Centisome position: 85.58
GC content: 70.52
Gene sequence:
>1272_bases ATGCCGGTACAGACGATGGACTTCGCCGCTCCGTCCTTCCGGACGGATCCGTTCCCGGCCTGGTCCGACCTGCGCCGGGC CGGGCCGCTGCACCGGGACGTCAGCGGTGCGTGGATCGTCGTGAGCCACCGGGAGGTCGGCCGGCTGCTCGCTGATCCGC GAGTGGGCAAGGACCTCCGTCGGCTGAGTACCTACGGGGCGCAACGTCCCTATGGCCCGGACGGGCTCGCCGAGTACTAC ATCGAGCAGTGGATGGAGTGCCGGCTCCCGACGATGCACCGGCGATGGCGTCAGCTGGTCCTGCCTGGATTCACCCACCG GGCGGTCCACGGCCTGCGAGCCGAGCTGTGCCGGACCGCCGACGACCTTCTCACCCACGCGCTCACCCACGCGCCGTCCG ACGGACAGGTCGATCTCCTGCGGGACTTCGCCAGACCGTTCCCGGTCGCCGTGATCGTCCGGGTCCTCGGGCTGACGGAC CTGGACACCGACCGGCTGGCGCAGCTGTCCCGAACGATCGCGGCGGTCCTGGAACCTAACGCCGCCGTGTCGGCGCGGGA GGCCGGTGACGCGGCCCTGGCGGAACTCGCCGGACTGCTGTGGGACGCGGTGCGGGCGGACCGGGGCCCGCACCCCGACG GATTCCTGCGCCGACTCGTCGACGCGAACAAGGGCCTGCTGAGCCCCGAGCAGCTGATCGCCACGGTACTGCTGTTGTTC CTGTCCGGGAACGACACGATCACGGGCCTGATCGCCAACGGGGTGCTTGCGCTCGCCAGTGTCCCCGACCAGGCTGACCG ACTGCGCGCGCATCCTGAACTGCTTCCGATGGCGGTCGAGGAGGTTCTGCGGTTCGACGCGCCCGCCTGCGTCGCGGTCC GGACGACCTACGAGCCGATGACGATCGACGGCGTCACCGTCGAGCGCGGTGCCGCGCTGCTCCTGGCGATCAGCTCCGCC AACCGTGACCCGGCGGCCTTCGCCGAGCCCGACGTCTTCCGTGTCGACCGGCGCCCGATCCGGCATTTCGCGTTCGGCTC GGGCGACCACACCTGCGTCGGGATCGGCCTCGCCCGGATGGAGGCGACGATCGCGCTCGAAGCGCTCCTGCACCGTTTTC CCCGGTTGACCCACGACCCATCGACCCTGCGGTGGAGCGATGCTCTTTACCTGCGTTCTCCGGAGAACCTGGTACTCCTG TGCACTGTGCCGCCGGCCCCCGAGCGGGCCTGTGGGGTGCCAGAAGTCGGCCTGGGTCGTGACCTGGGGTGA
Upstream 100 bases:
>100_bases CTGCCAGGCCCTGGCCGACCAGCCGTCCTCGCGGTCGCCCGGACGGGCGCCTGAGGGCCGGCCCGGATGACATCGACATC CCGTCGCGGAGGAGGCACAG
Downstream 100 bases:
>100_bases TGCGACGACGCAGGGCCGATGGGATGATGGTCAGCGTGCTGCGCCACGAGGTCGCCGTGCTGCGCCGCACCCAGCCCAAG CCCCAGGCGGCGGGTCGCCC
Product: cytochrome P450
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 423; Mature: 422
Protein sequence:
>423_residues MPVQTMDFAAPSFRTDPFPAWSDLRRAGPLHRDVSGAWIVVSHREVGRLLADPRVGKDLRRLSTYGAQRPYGPDGLAEYY IEQWMECRLPTMHRRWRQLVLPGFTHRAVHGLRAELCRTADDLLTHALTHAPSDGQVDLLRDFARPFPVAVIVRVLGLTD LDTDRLAQLSRTIAAVLEPNAAVSAREAGDAALAELAGLLWDAVRADRGPHPDGFLRRLVDANKGLLSPEQLIATVLLLF LSGNDTITGLIANGVLALASVPDQADRLRAHPELLPMAVEEVLRFDAPACVAVRTTYEPMTIDGVTVERGAALLLAISSA NRDPAAFAEPDVFRVDRRPIRHFAFGSGDHTCVGIGLARMEATIALEALLHRFPRLTHDPSTLRWSDALYLRSPENLVLL CTVPPAPERACGVPEVGLGRDLG
Sequences:
>Translated_423_residues MPVQTMDFAAPSFRTDPFPAWSDLRRAGPLHRDVSGAWIVVSHREVGRLLADPRVGKDLRRLSTYGAQRPYGPDGLAEYY IEQWMECRLPTMHRRWRQLVLPGFTHRAVHGLRAELCRTADDLLTHALTHAPSDGQVDLLRDFARPFPVAVIVRVLGLTD LDTDRLAQLSRTIAAVLEPNAAVSAREAGDAALAELAGLLWDAVRADRGPHPDGFLRRLVDANKGLLSPEQLIATVLLLF LSGNDTITGLIANGVLALASVPDQADRLRAHPELLPMAVEEVLRFDAPACVAVRTTYEPMTIDGVTVERGAALLLAISSA NRDPAAFAEPDVFRVDRRPIRHFAFGSGDHTCVGIGLARMEATIALEALLHRFPRLTHDPSTLRWSDALYLRSPENLVLL CTVPPAPERACGVPEVGLGRDLG >Mature_422_residues PVQTMDFAAPSFRTDPFPAWSDLRRAGPLHRDVSGAWIVVSHREVGRLLADPRVGKDLRRLSTYGAQRPYGPDGLAEYYI EQWMECRLPTMHRRWRQLVLPGFTHRAVHGLRAELCRTADDLLTHALTHAPSDGQVDLLRDFARPFPVAVIVRVLGLTDL DTDRLAQLSRTIAAVLEPNAAVSAREAGDAALAELAGLLWDAVRADRGPHPDGFLRRLVDANKGLLSPEQLIATVLLLFL SGNDTITGLIANGVLALASVPDQADRLRAHPELLPMAVEEVLRFDAPACVAVRTTYEPMTIDGVTVERGAALLLAISSAN RDPAAFAEPDVFRVDRRPIRHFAFGSGDHTCVGIGLARMEATIALEALLHRFPRLTHDPSTLRWSDALYLRSPENLVLLC TVPPAPERACGVPEVGLGRDLG
Specific function: Involved in the metabolism of the antibiotic polyketide bacillaene which is involved in secondary metabolism. The substrate is dihydrobacillaene [H]
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
Organism=Homo sapiens, GI13435386, Length=410, Percent_Identity=22.1951219512195, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI5729796, Length=418, Percent_Identity=23.9234449760766, Blast_Score=73, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 46311; Mature: 46180
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVQTMDFAAPSFRTDPFPAWSDLRRAGPLHRDVSGAWIVVSHREVGRLLADPRVGKDLR CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEECHHHHHHHCCCCCCHHHH RLSTYGAQRPYGPDGLAEYYIEQWMECRLPTMHRRWRQLVLPGFTHRAVHGLRAELCRTA HHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH DDLLTHALTHAPSDGQVDLLRDFARPFPVAVIVRVLGLTDLDTDRLAQLSRTIAAVLEPN HHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC AAVSAREAGDAALAELAGLLWDAVRADRGPHPDGFLRRLVDANKGLLSPEQLIATVLLLF CCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHH LSGNDTITGLIANGVLALASVPDQADRLRAHPELLPMAVEEVLRFDAPACVAVRTTYEPM HCCCCCEEHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEECCCCE TIDGVTVERGAALLLAISSANRDPAAFAEPDVFRVDRRPIRHFAFGSGDHTCVGIGLARM EECCEEECCCCEEEEEEECCCCCCCCCCCCCCEECCCCHHHHHCCCCCCCEEEEHHHHHH EATIALEALLHRFPRLTHDPSTLRWSDALYLRSPENLVLLCTVPPAPERACGVPEVGLGR HHHHHHHHHHHHCCCCCCCCCCEEECCEEEEECCCCEEEEEECCCCCHHHCCCCCCCCCC DLG CCC >Mature Secondary Structure PVQTMDFAAPSFRTDPFPAWSDLRRAGPLHRDVSGAWIVVSHREVGRLLADPRVGKDLR CCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEECHHHHHHHCCCCCCHHHH RLSTYGAQRPYGPDGLAEYYIEQWMECRLPTMHRRWRQLVLPGFTHRAVHGLRAELCRTA HHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH DDLLTHALTHAPSDGQVDLLRDFARPFPVAVIVRVLGLTDLDTDRLAQLSRTIAAVLEPN HHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC AAVSAREAGDAALAELAGLLWDAVRADRGPHPDGFLRRLVDANKGLLSPEQLIATVLLLF CCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHH LSGNDTITGLIANGVLALASVPDQADRLRAHPELLPMAVEEVLRFDAPACVAVRTTYEPM HCCCCCEEHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEECCCCE TIDGVTVERGAALLLAISSANRDPAAFAEPDVFRVDRRPIRHFAFGSGDHTCVGIGLARM EECCEEECCCCEEEEEEECCCCCCCCCCCCCCEECCCCHHHHHCCCCCCCEEEEHHHHHH EATIALEALLHRFPRLTHDPSTLRWSDALYLRSPENLVLLCTVPPAPERACGVPEVGLGR HHHHHHHHHHHHCCCCCCCCCCEEECCEEEEECCCCEEEEEECCCCCHHHCCCCCCCCCC DLG CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]