| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317984
Identifier: 158317984
GI number: 158317984
Start: 7580438
End: 7581610
Strand: Direct
Name: 158317984
Synonym: Franean1_6244
Alternate gene names: NA
Gene position: 7580438-7581610 (Clockwise)
Preceding gene: 158317983
Following gene: 158317986
Centisome position: 84.4
GC content: 69.99
Gene sequence:
>1173_bases GTGGCAGTCGAGCCTTTTCGGATCCACATCAGCGAGGACCGTCTGGCCGTGCTCGGCGACCGGCTGCGCACCACCGACTG GGCGGAAGATCCGGTACGGGACGACAGCTGGCACTACGGCGTGCCCGCTCCGTACCTGCGCGAGCTGACCGAGTACTGGG CCACGCGGTACGACTGGCGCGCGCACGAGGCGGCGATGAACCGGTGGCCGCACGTCCGGGGCGAGATCGACGGTGTCACC GTCCATGCGCTCCACGAACGCGGCTCCGGCCCCGCACCGCTTCCGCTCGTCCTCTCCCACGGATGGCCGTGGACCTTCTG GGACTTCAGGAAGGTGATCGAGCCGCTCGCTCACCCCGAACGTTTCGGCGCCGATCCCTCGGACGCCTTCGACGTCGTCG TGCCGTCCCTGCCCGGCTCGGTCTTCTCCTCGCCCACCCCGGCCGGGGTCGGATTTCGGCAGACCGCCGCCCTGTGGGTG AAACTCATGACCGAACTCGGCTACCAGCGCTTCGGCGCGCACGGCGGCGACTCGGGCGCGTACGTCACCGCACAGCTCGC CCACGAGTTCGCCGACCGGCTCGTCGGCGCACATCTGACGTTCCCCGCTTTGCTCGGCACCGACCTGGGCGGGGTGAGCC GGGACGACTTCGCGCCCGAGGAGGTCGACGACTTCGACCGGCAGCGTCCCGCGATGCTCAACCTCACGCATTTCCTGACG CACACCTTCGAACCCCGGACCCTGGCCTGGGCGTTGCAGGACTCCCCCGCCGGCCTGGCGGCCTGGATGGTTCAGCGGCG GCGGGCCTGGAGCGACTGCGGCGGCGACGTGGAACGCCGCTTCAGCAAGGACGATCTCATCACGAGCTTCGCCCTCTACT GGCTCACCGGCACCGTCGGCGGCTCGCTGCGGTTCTACGCCGACTCGTTCCAGCGGCCGTGGATCCCCTCGCACGACCGT CGGCCCGTCCTGGAGTCACCGACGGGCATCGCCGTGTTCCCGTACGAGCTGACGCATGTGCCACGCACTCTTGCGCAGCG CGAGGCGAACCTCGTGCACTGGACCCGGATGAGCCGTGGCGGCCACTTCGCAGCGGCTGAGGAACCACAACTCGTCGTGG CGGACATCCGCGCGTTCTTCCGGCCGCTGCGCGCGACCGGACTGTCCCGCTGA
Upstream 100 bases:
>100_bases CCCGTTCGGTGACCGGCTCCGTCTACACCATGGACAACGGCCTCACCGTCAGCTGACCGCTGGCCGTCTCACCTGGTAAT CGTGGCCGGAGGGTGAATAC
Downstream 100 bases:
>100_bases CGTCCGTCGAGACATCCGCTGTCGCGGCGCATCATCCTCACCCCCACCAAGGCCGGGTTGAGGATCGGGCTCAGGGGGCG TACACGAACAGCAGGGCTCC
Product: epocide hydrolase domain-containing protein
Products: NA
Alternate protein names: Epoxide hydratase [H]
Number of amino acids: Translated: 390; Mature: 389
Protein sequence:
>390_residues MAVEPFRIHISEDRLAVLGDRLRTTDWAEDPVRDDSWHYGVPAPYLRELTEYWATRYDWRAHEAAMNRWPHVRGEIDGVT VHALHERGSGPAPLPLVLSHGWPWTFWDFRKVIEPLAHPERFGADPSDAFDVVVPSLPGSVFSSPTPAGVGFRQTAALWV KLMTELGYQRFGAHGGDSGAYVTAQLAHEFADRLVGAHLTFPALLGTDLGGVSRDDFAPEEVDDFDRQRPAMLNLTHFLT HTFEPRTLAWALQDSPAGLAAWMVQRRRAWSDCGGDVERRFSKDDLITSFALYWLTGTVGGSLRFYADSFQRPWIPSHDR RPVLESPTGIAVFPYELTHVPRTLAQREANLVHWTRMSRGGHFAAAEEPQLVVADIRAFFRPLRATGLSR
Sequences:
>Translated_390_residues MAVEPFRIHISEDRLAVLGDRLRTTDWAEDPVRDDSWHYGVPAPYLRELTEYWATRYDWRAHEAAMNRWPHVRGEIDGVT VHALHERGSGPAPLPLVLSHGWPWTFWDFRKVIEPLAHPERFGADPSDAFDVVVPSLPGSVFSSPTPAGVGFRQTAALWV KLMTELGYQRFGAHGGDSGAYVTAQLAHEFADRLVGAHLTFPALLGTDLGGVSRDDFAPEEVDDFDRQRPAMLNLTHFLT HTFEPRTLAWALQDSPAGLAAWMVQRRRAWSDCGGDVERRFSKDDLITSFALYWLTGTVGGSLRFYADSFQRPWIPSHDR RPVLESPTGIAVFPYELTHVPRTLAQREANLVHWTRMSRGGHFAAAEEPQLVVADIRAFFRPLRATGLSR >Mature_389_residues AVEPFRIHISEDRLAVLGDRLRTTDWAEDPVRDDSWHYGVPAPYLRELTEYWATRYDWRAHEAAMNRWPHVRGEIDGVTV HALHERGSGPAPLPLVLSHGWPWTFWDFRKVIEPLAHPERFGADPSDAFDVVVPSLPGSVFSSPTPAGVGFRQTAALWVK LMTELGYQRFGAHGGDSGAYVTAQLAHEFADRLVGAHLTFPALLGTDLGGVSRDDFAPEEVDDFDRQRPAMLNLTHFLTH TFEPRTLAWALQDSPAGLAAWMVQRRRAWSDCGGDVERRFSKDDLITSFALYWLTGTVGGSLRFYADSFQRPWIPSHDRR PVLESPTGIAVFPYELTHVPRTLAQREANLVHWTRMSRGGHFAAAEEPQLVVADIRAFFRPLRATGLSR
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S33 family [H]
Homologues:
Organism=Homo sapiens, GI4503583, Length=408, Percent_Identity=32.5980392156863, Blast_Score=242, Evalue=5e-64, Organism=Homo sapiens, GI209862837, Length=408, Percent_Identity=32.5980392156863, Blast_Score=242, Evalue=5e-64, Organism=Caenorhabditis elegans, GI17564944, Length=407, Percent_Identity=30.2211302211302, Blast_Score=197, Evalue=1e-50, Organism=Caenorhabditis elegans, GI193207462, Length=411, Percent_Identity=26.5206812652068, Blast_Score=129, Evalue=2e-30, Organism=Drosophila melanogaster, GI20130139, Length=399, Percent_Identity=29.8245614035088, Blast_Score=170, Evalue=1e-42, Organism=Drosophila melanogaster, GI24655327, Length=409, Percent_Identity=28.8508557457213, Blast_Score=160, Evalue=1e-39, Organism=Drosophila melanogaster, GI19922580, Length=415, Percent_Identity=25.3012048192771, Blast_Score=132, Evalue=6e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: =3.3.2.10 [H]
Molecular weight: Translated: 43969; Mature: 43838
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVEPFRIHISEDRLAVLGDRLRTTDWAEDPVRDDSWHYGVPAPYLRELTEYWATRYDWR CCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCH AHEAAMNRWPHVRGEIDGVTVHALHERGSGPAPLPLVLSHGWPWTFWDFRKVIEPLAHPE HHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCHH RFGADPSDAFDVVVPSLPGSVFSSPTPAGVGFRQTAALWVKLMTELGYQRFGAHGGDSGA HCCCCCCCCCEEEECCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC YVTAQLAHEFADRLVGAHLTFPALLGTDLGGVSRDDFAPEEVDDFDRQRPAMLNLTHFLT EEHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHH HTFEPRTLAWALQDSPAGLAAWMVQRRRAWSDCGGDVERRFSKDDLITSFALYWLTGTVG HCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHCCC GSLRFYADSFQRPWIPSHDRRPVLESPTGIAVFPYELTHVPRTLAQREANLVHWTRMSRG CCEEEEHHCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCEEEEECCCC GHFAAAEEPQLVVADIRAFFRPLRATGLSR CCEECCCCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AVEPFRIHISEDRLAVLGDRLRTTDWAEDPVRDDSWHYGVPAPYLRELTEYWATRYDWR CCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCH AHEAAMNRWPHVRGEIDGVTVHALHERGSGPAPLPLVLSHGWPWTFWDFRKVIEPLAHPE HHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCHH RFGADPSDAFDVVVPSLPGSVFSSPTPAGVGFRQTAALWVKLMTELGYQRFGAHGGDSGA HCCCCCCCCCEEEECCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC YVTAQLAHEFADRLVGAHLTFPALLGTDLGGVSRDDFAPEEVDDFDRQRPAMLNLTHFLT EEHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHH HTFEPRTLAWALQDSPAGLAAWMVQRRRAWSDCGGDVERRFSKDDLITSFALYWLTGTVG HCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHCCC GSLRFYADSFQRPWIPSHDRRPVLESPTGIAVFPYELTHVPRTLAQREANLVHWTRMSRG CCEEEEHHCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCEEEEECCCC GHFAAAEEPQLVVADIRAFFRPLRATGLSR CCEECCCCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8226695 [H]