| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is fabG [H]
Identifier: 158317983
GI number: 158317983
Start: 7579647
End: 7580393
Strand: Direct
Name: fabG [H]
Synonym: Franean1_6243
Alternate gene names: 158317983
Gene position: 7579647-7580393 (Clockwise)
Preceding gene: 158317982
Following gene: 158317984
Centisome position: 84.39
GC content: 68.01
Gene sequence:
>747_bases GTGACAGATTTATTCGAGGGCAAGGTCGCCCTCATCACCGGCGCCGGATCAGGCATGGGCCGGGCGATCACCATCCGGCT GGCGAGGGAAGGCGCCTCGGTGTTGGCCCTCGACATCGACGAGGGCCGGCTGGCCGAGACGAAGGCACTCACCGCGGGCA CGGTGTCGGTCCGCCAGGCTGATGTCAGCGACCCGGCTGCGTGCGCCGAGGCGGTGGCCGCGTGCGTCGACGAGTTCGGG CAGCTGGACGTACTGGGCAACGTCGCCGGTATCTACCTGGCCGAGCACACCACGAAGGTGACTCTGGAGCAGTACCGACG GGTGATGGGCGTCAATCTTGACGCCTACTTCTTCCTGGCTCAGGCCGCCATTCCGCACCTGTTGGAGACGGGTGGCAACA TCGTGAACATCGCCTCCAACGCCGGTATCCAGGGGCTCCCGTACTCCGCCGCCTACTGCATGAGCAAGGGTGGCGTCATC CAGCTCACCCGGGCGCTGGCCGTCGAGTTCCTCAAGACGCCGCTGCGCGTCAATGCCATCGCCCCGGCGGGCACCAACAC CAACATCGCGTCGGCGATGACGTTCCCGGCCGGCATGGACCCCGACCTTGCCCGTCGCATGGCGGGCCTGCGGGGCCTGG CCGAGCCAGCCGAGGTCGCCGCGCTGTTCTCCTTCCTCGCCTCCGGTGCGGCCCGTTCGGTGACCGGCTCCGTCTACACC ATGGACAACGGCCTCACCGTCAGCTGA
Upstream 100 bases:
>100_bases CCACGCCGGCCAGCCCGGCATTTTCGTCGATCAACGGCCGTTCTGACCGCTGCCCTGACCCAGCGCCCTGTGGCCATCTA CCAAACGAGGGATGTCAGTC
Downstream 100 bases:
>100_bases CCGCTGGCCGTCTCACCTGGTAATCGTGGCCGGAGGGTGAATACGTGGCAGTCGAGCCTTTTCGGATCCACATCAGCGAG GACCGTCTGGCCGTGCTCGG
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MTDLFEGKVALITGAGSGMGRAITIRLAREGASVLALDIDEGRLAETKALTAGTVSVRQADVSDPAACAEAVAACVDEFG QLDVLGNVAGIYLAEHTTKVTLEQYRRVMGVNLDAYFFLAQAAIPHLLETGGNIVNIASNAGIQGLPYSAAYCMSKGGVI QLTRALAVEFLKTPLRVNAIAPAGTNTNIASAMTFPAGMDPDLARRMAGLRGLAEPAEVAALFSFLASGAARSVTGSVYT MDNGLTVS
Sequences:
>Translated_248_residues MTDLFEGKVALITGAGSGMGRAITIRLAREGASVLALDIDEGRLAETKALTAGTVSVRQADVSDPAACAEAVAACVDEFG QLDVLGNVAGIYLAEHTTKVTLEQYRRVMGVNLDAYFFLAQAAIPHLLETGGNIVNIASNAGIQGLPYSAAYCMSKGGVI QLTRALAVEFLKTPLRVNAIAPAGTNTNIASAMTFPAGMDPDLARRMAGLRGLAEPAEVAALFSFLASGAARSVTGSVYT MDNGLTVS >Mature_247_residues TDLFEGKVALITGAGSGMGRAITIRLAREGASVLALDIDEGRLAETKALTAGTVSVRQADVSDPAACAEAVAACVDEFGQ LDVLGNVAGIYLAEHTTKVTLEQYRRVMGVNLDAYFFLAQAAIPHLLETGGNIVNIASNAGIQGLPYSAAYCMSKGGVIQ LTRALAVEFLKTPLRVNAIAPAGTNTNIASAMTFPAGMDPDLARRMAGLRGLAEPAEVAALFSFLASGAARSVTGSVYTM DNGLTVS
Specific function: Unknown
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI15277342, Length=261, Percent_Identity=34.0996168582375, Blast_Score=103, Evalue=1e-22, Organism=Homo sapiens, GI66933014, Length=251, Percent_Identity=30.2788844621514, Blast_Score=95, Evalue=6e-20, Organism=Homo sapiens, GI4758504, Length=231, Percent_Identity=34.1991341991342, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI31542939, Length=230, Percent_Identity=28.2608695652174, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI19923817, Length=259, Percent_Identity=26.2548262548263, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI32483357, Length=247, Percent_Identity=27.5303643724696, Blast_Score=81, Evalue=9e-16, Organism=Homo sapiens, GI210032110, Length=188, Percent_Identity=28.1914893617021, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI7705925, Length=250, Percent_Identity=29.6, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI4504505, Length=202, Percent_Identity=31.6831683168317, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI7706318, Length=225, Percent_Identity=28, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI83715985, Length=216, Percent_Identity=34.2592592592593, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI10190704, Length=249, Percent_Identity=28.9156626506024, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI59889578, Length=209, Percent_Identity=31.1004784688995, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI142976729, Length=191, Percent_Identity=29.3193717277487, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI40254992, Length=243, Percent_Identity=27.5720164609054, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI5031737, Length=233, Percent_Identity=26.6094420600858, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI40807363, Length=168, Percent_Identity=29.1666666666667, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI126723750, Length=251, Percent_Identity=24.7011952191235, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI224922801, Length=170, Percent_Identity=28.8235294117647, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI20149619, Length=192, Percent_Identity=29.1666666666667, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI4504503, Length=219, Percent_Identity=25.5707762557078, Blast_Score=65, Evalue=5e-11, Organism=Escherichia coli, GI1789208, Length=250, Percent_Identity=33.2, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI87082100, Length=250, Percent_Identity=32, Blast_Score=105, Evalue=2e-24, Organism=Escherichia coli, GI1790717, Length=254, Percent_Identity=31.1023622047244, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1787335, Length=245, Percent_Identity=33.0612244897959, Blast_Score=98, Evalue=5e-22, Organism=Escherichia coli, GI1789378, Length=244, Percent_Identity=30.327868852459, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI87082160, Length=255, Percent_Identity=30.1960784313725, Blast_Score=88, Evalue=7e-19, Organism=Escherichia coli, GI1788459, Length=252, Percent_Identity=28.968253968254, Blast_Score=87, Evalue=7e-19, Organism=Escherichia coli, GI1787820, Length=178, Percent_Identity=31.4606741573034, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1787905, Length=249, Percent_Identity=28.5140562248996, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI2367175, Length=248, Percent_Identity=31.0483870967742, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI1786812, Length=256, Percent_Identity=27.734375, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI1787526, Length=254, Percent_Identity=29.5275590551181, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI2367365, Length=244, Percent_Identity=29.5081967213115, Blast_Score=68, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17562906, Length=261, Percent_Identity=32.183908045977, Blast_Score=122, Evalue=2e-28, Organism=Caenorhabditis elegans, GI17562908, Length=265, Percent_Identity=31.3207547169811, Blast_Score=120, Evalue=4e-28, Organism=Caenorhabditis elegans, GI17559104, Length=258, Percent_Identity=32.9457364341085, Blast_Score=120, Evalue=6e-28, Organism=Caenorhabditis elegans, GI17531453, Length=242, Percent_Identity=35.1239669421488, Blast_Score=113, Evalue=7e-26, Organism=Caenorhabditis elegans, GI193204405, Length=240, Percent_Identity=30, Blast_Score=112, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17562910, Length=267, Percent_Identity=30.3370786516854, Blast_Score=111, Evalue=4e-25, Organism=Caenorhabditis elegans, GI17560220, Length=240, Percent_Identity=32.9166666666667, Blast_Score=110, Evalue=5e-25, Organism=Caenorhabditis elegans, GI71994604, Length=248, Percent_Identity=34.2741935483871, Blast_Score=110, Evalue=5e-25, Organism=Caenorhabditis elegans, GI17560150, Length=262, Percent_Identity=31.2977099236641, Blast_Score=107, Evalue=4e-24, Organism=Caenorhabditis elegans, GI71994600, Length=257, Percent_Identity=32.6848249027237, Blast_Score=103, Evalue=6e-23, Organism=Caenorhabditis elegans, GI72000259, Length=238, Percent_Identity=30.672268907563, Blast_Score=103, Evalue=7e-23, Organism=Caenorhabditis elegans, GI17562990, Length=259, Percent_Identity=30.5019305019305, Blast_Score=103, Evalue=7e-23, Organism=Caenorhabditis elegans, GI17562904, Length=240, Percent_Identity=29.5833333333333, Blast_Score=100, Evalue=6e-22, Organism=Caenorhabditis elegans, GI17563726, Length=242, Percent_Identity=29.3388429752066, Blast_Score=100, Evalue=8e-22, Organism=Caenorhabditis elegans, GI17560332, Length=262, Percent_Identity=30.1526717557252, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17538486, Length=243, Percent_Identity=29.2181069958848, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17538480, Length=196, Percent_Identity=32.6530612244898, Blast_Score=98, Evalue=3e-21, Organism=Caenorhabditis elegans, GI25147288, Length=252, Percent_Identity=30.5555555555556, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17551412, Length=196, Percent_Identity=31.6326530612245, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17555706, Length=248, Percent_Identity=32.258064516129, Blast_Score=94, Evalue=9e-20, Organism=Caenorhabditis elegans, GI115534694, Length=251, Percent_Identity=30.2788844621514, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17544670, Length=266, Percent_Identity=27.0676691729323, Blast_Score=91, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17561402, Length=252, Percent_Identity=30.5555555555556, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17565030, Length=274, Percent_Identity=27.7372262773723, Blast_Score=88, Evalue=5e-18, Organism=Caenorhabditis elegans, GI17564282, Length=198, Percent_Identity=32.3232323232323, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI193203117, Length=187, Percent_Identity=33.1550802139037, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI193203115, Length=187, Percent_Identity=33.1550802139037, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17560676, Length=257, Percent_Identity=28.0155642023346, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17536651, Length=251, Percent_Identity=27.8884462151394, Blast_Score=84, Evalue=8e-17, Organism=Caenorhabditis elegans, GI17538182, Length=234, Percent_Identity=29.4871794871795, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17508895, Length=197, Percent_Identity=28.9340101522843, Blast_Score=80, Evalue=7e-16, Organism=Caenorhabditis elegans, GI17536025, Length=250, Percent_Identity=27.6, Blast_Score=80, Evalue=9e-16, Organism=Caenorhabditis elegans, GI17568967, Length=192, Percent_Identity=28.6458333333333, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17561272, Length=250, Percent_Identity=30.8, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI193207185, Length=126, Percent_Identity=31.7460317460317, Blast_Score=65, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=190, Percent_Identity=31.5789473684211, Blast_Score=80, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6324126, Length=256, Percent_Identity=25.78125, Blast_Score=71, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6323882, Length=185, Percent_Identity=29.1891891891892, Blast_Score=69, Evalue=5e-13, Organism=Drosophila melanogaster, GI24644339, Length=255, Percent_Identity=38.4313725490196, Blast_Score=130, Evalue=6e-31, Organism=Drosophila melanogaster, GI28571526, Length=251, Percent_Identity=34.6613545816733, Blast_Score=114, Evalue=4e-26, Organism=Drosophila melanogaster, GI21357041, Length=251, Percent_Identity=33.0677290836653, Blast_Score=109, Evalue=2e-24, Organism=Drosophila melanogaster, GI23397609, Length=246, Percent_Identity=33.3333333333333, Blast_Score=108, Evalue=5e-24, Organism=Drosophila melanogaster, GI24639444, Length=244, Percent_Identity=34.0163934426229, Blast_Score=103, Evalue=8e-23, Organism=Drosophila melanogaster, GI24643142, Length=249, Percent_Identity=31.3253012048193, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI281364892, Length=229, Percent_Identity=30.5676855895196, Blast_Score=88, Evalue=4e-18, Organism=Drosophila melanogaster, GI24649181, Length=190, Percent_Identity=31.0526315789474, Blast_Score=87, Evalue=8e-18, Organism=Drosophila melanogaster, GI24644337, Length=255, Percent_Identity=35.2941176470588, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI17737361, Length=232, Percent_Identity=31.0344827586207, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI18859837, Length=209, Percent_Identity=30.1435406698565, Blast_Score=81, Evalue=8e-16, Organism=Drosophila melanogaster, GI21355319, Length=252, Percent_Identity=29.7619047619048, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24640492, Length=228, Percent_Identity=29.3859649122807, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI21355631, Length=169, Percent_Identity=28.4023668639053, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI24580925, Length=193, Percent_Identity=29.5336787564767, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI221331218, Length=210, Percent_Identity=26.6666666666667, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24665243, Length=210, Percent_Identity=26.6666666666667, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI21357673, Length=193, Percent_Identity=25.9067357512953, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24665268, Length=216, Percent_Identity=28.2407407407407, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI221331216, Length=210, Percent_Identity=26.1904761904762, Blast_Score=64, Evalue=7e-11, Organism=Drosophila melanogaster, GI161076371, Length=207, Percent_Identity=28.9855072463768, Blast_Score=64, Evalue=7e-11, Organism=Drosophila melanogaster, GI24665247, Length=210, Percent_Identity=26.1904761904762, Blast_Score=64, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 25585; Mature: 25453
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLFEGKVALITGAGSGMGRAITIRLAREGASVLALDIDEGRLAETKALTAGTVSVRQA CCCCCCCCEEEEEECCCCCCEEEEEEEECCCCEEEEEECCCCCCCHHHEEECCEEEEEEC DVSDPAACAEAVAACVDEFGQLDVLGNVAGIYLAEHTTKVTLEQYRRVMGVNLDAYFFLA CCCCHHHHHHHHHHHHHHHCCEEECCCHHEEEEECCCHHHHHHHHHHHHCCCCHHHHHHH QAAIPHLLETGGNIVNIASNAGIQGLPYSAAYCMSKGGVIQLTRALAVEFLKTPLRVNAI HHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEE APAGTNTNIASAMTFPAGMDPDLARRMAGLRGLAEPAEVAALFSFLASGAARSVTGSVYT CCCCCCCCCHHEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEEE MDNGLTVS ECCCEEEC >Mature Secondary Structure TDLFEGKVALITGAGSGMGRAITIRLAREGASVLALDIDEGRLAETKALTAGTVSVRQA CCCCCCCEEEEEECCCCCCEEEEEEEECCCCEEEEEECCCCCCCHHHEEECCEEEEEEC DVSDPAACAEAVAACVDEFGQLDVLGNVAGIYLAEHTTKVTLEQYRRVMGVNLDAYFFLA CCCCHHHHHHHHHHHHHHHCCEEECCCHHEEEEECCCHHHHHHHHHHHHCCCCHHHHHHH QAAIPHLLETGGNIVNIASNAGIQGLPYSAAYCMSKGGVIQLTRALAVEFLKTPLRVNAI HHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEE APAGTNTNIASAMTFPAGMDPDLARRMAGLRGLAEPAEVAALFSFLASGAARSVTGSVYT CCCCCCCCCHHEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEEE MDNGLTVS ECCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]