| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317986
Identifier: 158317986
GI number: 158317986
Start: 7583455
End: 7583844
Strand: Direct
Name: 158317986
Synonym: Franean1_6246
Alternate gene names: NA
Gene position: 7583455-7583844 (Clockwise)
Preceding gene: 158317984
Following gene: 158317987
Centisome position: 84.43
GC content: 67.95
Gene sequence:
>390_bases GTGGCTGACGCCGACGACGTGCGCCGGTTGGCGCTGGCGCTGCCACACGTGGTGGAGATCGAGAGCGATGGCTTTGACTT CCGGGTGGCCGGCAAGGGGTTCGTCTGGTCCTATCCCGAGCGCACGCCCGGGAAGCCGCGCCTGATCCGCACTGATACCG CAGTGCTGTTCGTCGGCGACGAGGCCGAAAAGCAGGCGCTCCTGCTCGGGGAACCTGACATCTTCTTCACCACGCCGGCC TACAACGGCCTGCCCCTGGTGATGGTGCGCCTGGCAGCGGTGACGGTCGAACGCCTGCGGGAACTCGTGACCGATGCGTG GCGGATGCGTGACCCGGACGCGCATGTCAGCGGACTCGACCAGCAGGACGAGCAGCCAGCCCTGGGCTGA
Upstream 100 bases:
>100_bases CAAGCAGCCATACAACCCGGACCAAGTTATCCAAAACCGTTCCCGGCTGCCGGAGGATAGCCTCGTCGCATGCTGCGGGC GCGTTCTCGGGGAGACCTCG
Downstream 100 bases:
>100_bases CCTGGCCCGATCACCAGTCGCTGTCGCCAGCGTCGCGCGCGGCGACGGCTGCCGCATGCTGTCTCACACCCCCGACGAGG ACGTCACCCTGGCCGGCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MADADDVRRLALALPHVVEIESDGFDFRVAGKGFVWSYPERTPGKPRLIRTDTAVLFVGDEAEKQALLLGEPDIFFTTPA YNGLPLVMVRLAAVTVERLRELVTDAWRMRDPDAHVSGLDQQDEQPALG
Sequences:
>Translated_129_residues MADADDVRRLALALPHVVEIESDGFDFRVAGKGFVWSYPERTPGKPRLIRTDTAVLFVGDEAEKQALLLGEPDIFFTTPA YNGLPLVMVRLAAVTVERLRELVTDAWRMRDPDAHVSGLDQQDEQPALG >Mature_128_residues ADADDVRRLALALPHVVEIESDGFDFRVAGKGFVWSYPERTPGKPRLIRTDTAVLFVGDEAEKQALLLGEPDIFFTTPAY NGLPLVMVRLAAVTVERLRELVTDAWRMRDPDAHVSGLDQQDEQPALG
Specific function: Unknown
COG id: COG3801
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007351 [H]
Pfam domain/function: PF04237 DUF419 [H]
EC number: NA
Molecular weight: Translated: 14332; Mature: 14201
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADADDVRRLALALPHVVEIESDGFDFRVAGKGFVWSYPERTPGKPRLIRTDTAVLFVGD CCCHHHHHHHHHHCCCEEEECCCCCEEEEECCCEEEECCCCCCCCCEEEEECEEEEEECC EAEKQALLLGEPDIFFTTPAYNGLPLVMVRLAAVTVERLRELVTDAWRMRDPDAHVSGLD CCCCCEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC QQDEQPALG CCCCCCCCC >Mature Secondary Structure ADADDVRRLALALPHVVEIESDGFDFRVAGKGFVWSYPERTPGKPRLIRTDTAVLFVGD CCHHHHHHHHHHCCCEEEECCCCCEEEEECCCEEEECCCCCCCCCEEEEECEEEEEECC EAEKQALLLGEPDIFFTTPAYNGLPLVMVRLAAVTVERLRELVTDAWRMRDPDAHVSGLD CCCCCEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC QQDEQPALG CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]