Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158317986

Identifier: 158317986

GI number: 158317986

Start: 7583455

End: 7583844

Strand: Direct

Name: 158317986

Synonym: Franean1_6246

Alternate gene names: NA

Gene position: 7583455-7583844 (Clockwise)

Preceding gene: 158317984

Following gene: 158317987

Centisome position: 84.43

GC content: 67.95

Gene sequence:

>390_bases
GTGGCTGACGCCGACGACGTGCGCCGGTTGGCGCTGGCGCTGCCACACGTGGTGGAGATCGAGAGCGATGGCTTTGACTT
CCGGGTGGCCGGCAAGGGGTTCGTCTGGTCCTATCCCGAGCGCACGCCCGGGAAGCCGCGCCTGATCCGCACTGATACCG
CAGTGCTGTTCGTCGGCGACGAGGCCGAAAAGCAGGCGCTCCTGCTCGGGGAACCTGACATCTTCTTCACCACGCCGGCC
TACAACGGCCTGCCCCTGGTGATGGTGCGCCTGGCAGCGGTGACGGTCGAACGCCTGCGGGAACTCGTGACCGATGCGTG
GCGGATGCGTGACCCGGACGCGCATGTCAGCGGACTCGACCAGCAGGACGAGCAGCCAGCCCTGGGCTGA

Upstream 100 bases:

>100_bases
CAAGCAGCCATACAACCCGGACCAAGTTATCCAAAACCGTTCCCGGCTGCCGGAGGATAGCCTCGTCGCATGCTGCGGGC
GCGTTCTCGGGGAGACCTCG

Downstream 100 bases:

>100_bases
CCTGGCCCGATCACCAGTCGCTGTCGCCAGCGTCGCGCGCGGCGACGGCTGCCGCATGCTGTCTCACACCCCCGACGAGG
ACGTCACCCTGGCCGGCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MADADDVRRLALALPHVVEIESDGFDFRVAGKGFVWSYPERTPGKPRLIRTDTAVLFVGDEAEKQALLLGEPDIFFTTPA
YNGLPLVMVRLAAVTVERLRELVTDAWRMRDPDAHVSGLDQQDEQPALG

Sequences:

>Translated_129_residues
MADADDVRRLALALPHVVEIESDGFDFRVAGKGFVWSYPERTPGKPRLIRTDTAVLFVGDEAEKQALLLGEPDIFFTTPA
YNGLPLVMVRLAAVTVERLRELVTDAWRMRDPDAHVSGLDQQDEQPALG
>Mature_128_residues
ADADDVRRLALALPHVVEIESDGFDFRVAGKGFVWSYPERTPGKPRLIRTDTAVLFVGDEAEKQALLLGEPDIFFTTPAY
NGLPLVMVRLAAVTVERLRELVTDAWRMRDPDAHVSGLDQQDEQPALG

Specific function: Unknown

COG id: COG3801

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007351 [H]

Pfam domain/function: PF04237 DUF419 [H]

EC number: NA

Molecular weight: Translated: 14332; Mature: 14201

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADADDVRRLALALPHVVEIESDGFDFRVAGKGFVWSYPERTPGKPRLIRTDTAVLFVGD
CCCHHHHHHHHHHCCCEEEECCCCCEEEEECCCEEEECCCCCCCCCEEEEECEEEEEECC
EAEKQALLLGEPDIFFTTPAYNGLPLVMVRLAAVTVERLRELVTDAWRMRDPDAHVSGLD
CCCCCEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
QQDEQPALG
CCCCCCCCC
>Mature Secondary Structure 
ADADDVRRLALALPHVVEIESDGFDFRVAGKGFVWSYPERTPGKPRLIRTDTAVLFVGD
CCHHHHHHHHHHCCCEEEECCCCCEEEEECCCEEEECCCCCCCCCEEEEECEEEEEECC
EAEKQALLLGEPDIFFTTPAYNGLPLVMVRLAAVTVERLRELVTDAWRMRDPDAHVSGLD
CCCCCEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
QQDEQPALG
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]