| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317921
Identifier: 158317921
GI number: 158317921
Start: 7509012
End: 7509647
Strand: Direct
Name: 158317921
Synonym: Franean1_6179
Alternate gene names: NA
Gene position: 7509012-7509647 (Clockwise)
Preceding gene: 158317919
Following gene: 158317925
Centisome position: 83.6
GC content: 73.27
Gene sequence:
>636_bases ATGCCACGATCCACCCCCAGCCCCATCACGGCCCCGACCGCGGCCGTGATGGGCGCCGCGGCCCCGACCACCGAGCCGCG CGACGCTCACTCCGGGTCACCCTCGGATCCGGCGATCTCCCCGACCGACGTCCCGACGTTCCCGAGTGACACCACGATCT TCGTCGGCCGGGTCGACGGGACCGCCGTCACCGTCACCGTGACGCCCTGTTCGGGGGGCCGTCCGGAGAGTGGGCCCACG GGCGGGTCCCGGGGCACTCACGCCAATAGCGACAACAAGATCGCGGACAGCGAGGACACGGACGGCGAGGAGGAGGAGGA GGAGGAGGTGACCGTGCGGCTGCGGATCGAACCGCCGGAACCGGGCCGTGCCGCCTTCGCCGACCTCGAGCCGGACGAGA TCCTCCGCATAGTCGATCACCTGATGACGATCGCCTCCACTCGGCCGGCCGCGTTCCGGGCCGCACCCGACCCGGCCGGG GGCGCCTCACGGCTCACGGTCGTGGCGACCGAGGGCACGACGGCCGGAGGCCTGCGCCAGGCGCTGGCCTCCGTGCCGGC CGAGGCCCGGTTGCAGGACTTCGTCACCGACACCGAGGTCGTCCTCGTCTTCGGCCCGTACCGGCAGCGGCCCTGA
Upstream 100 bases:
>100_bases AAACTCCCCGGCCCGCGGGGTGTAATGGCCGAAATTCACATGAGAGCGTCGTCCCGTGAACAGCGATCGAGCAATCCCTC GGCCGCGGACAGGAGTAACG
Downstream 100 bases:
>100_bases AACCGTAGGTGCCCAGGGCGGGACACCGACGCCGGGCCGCTGCCTGCCAGCGGAGAACGGCCAGGTCGGTCAGCCCCCGG GGACGCCGGCCCGCCGCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MPRSTPSPITAPTAAVMGAAAPTTEPRDAHSGSPSDPAISPTDVPTFPSDTTIFVGRVDGTAVTVTVTPCSGGRPESGPT GGSRGTHANSDNKIADSEDTDGEEEEEEEVTVRLRIEPPEPGRAAFADLEPDEILRIVDHLMTIASTRPAAFRAAPDPAG GASRLTVVATEGTTAGGLRQALASVPAEARLQDFVTDTEVVLVFGPYRQRP
Sequences:
>Translated_211_residues MPRSTPSPITAPTAAVMGAAAPTTEPRDAHSGSPSDPAISPTDVPTFPSDTTIFVGRVDGTAVTVTVTPCSGGRPESGPT GGSRGTHANSDNKIADSEDTDGEEEEEEEVTVRLRIEPPEPGRAAFADLEPDEILRIVDHLMTIASTRPAAFRAAPDPAG GASRLTVVATEGTTAGGLRQALASVPAEARLQDFVTDTEVVLVFGPYRQRP >Mature_210_residues PRSTPSPITAPTAAVMGAAAPTTEPRDAHSGSPSDPAISPTDVPTFPSDTTIFVGRVDGTAVTVTVTPCSGGRPESGPTG GSRGTHANSDNKIADSEDTDGEEEEEEEVTVRLRIEPPEPGRAAFADLEPDEILRIVDHLMTIASTRPAAFRAAPDPAGG ASRLTVVATEGTTAGGLRQALASVPAEARLQDFVTDTEVVLVFGPYRQRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21853; Mature: 21722
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRSTPSPITAPTAAVMGAAAPTTEPRDAHSGSPSDPAISPTDVPTFPSDTTIFVGRVDG CCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC TAVTVTVTPCSGGRPESGPTGGSRGTHANSDNKIADSEDTDGEEEEEEEVTVRLRIEPPE CEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCC PGRAAFADLEPDEILRIVDHLMTIASTRPAAFRAAPDPAGGASRLTVVATEGTTAGGLRQ CCCEEECCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEEEECCCCHHHHHH ALASVPAEARLQDFVTDTEVVLVFGPYRQRP HHHHCCHHHHHHHHCCCCEEEEEECCCCCCC >Mature Secondary Structure PRSTPSPITAPTAAVMGAAAPTTEPRDAHSGSPSDPAISPTDVPTFPSDTTIFVGRVDG CCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC TAVTVTVTPCSGGRPESGPTGGSRGTHANSDNKIADSEDTDGEEEEEEEVTVRLRIEPPE CEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCC PGRAAFADLEPDEILRIVDHLMTIASTRPAAFRAAPDPAGGASRLTVVATEGTTAGGLRQ CCCEEECCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEEEECCCCHHHHHH ALASVPAEARLQDFVTDTEVVLVFGPYRQRP HHHHCCHHHHHHHHCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA