| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317632
Identifier: 158317632
GI number: 158317632
Start: 7149587
End: 7152178
Strand: Reverse
Name: 158317632
Synonym: Franean1_5889
Alternate gene names: NA
Gene position: 7152178-7149587 (Counterclockwise)
Preceding gene: 158317638
Following gene: 158317631
Centisome position: 79.63
GC content: 72.34
Gene sequence:
>2592_bases GTGTTCACCGACGTCCGACTTCGCGAGGTCTGGTCGCATCTGGAGTCGGGCGGTGCGCAGGCCCTGACTCTGGACGTATT CGACACTCTGCTCTGGCGCATGGTGCCCGAGCCGGTTCACGCGTTCATCACCCTGGGGCACCGGCTGGCCGACCTCGGCC AGCTGCCGTCCGGTGTCACGCCGGGCGAGTTCGCCCGGCTGCGGGTCTTCGCCGAGCACAAGGCCAGGCTGCACTCGCAC GAGGTGCGCGGCACCCACGAGGTGCGCCTGGACGAGATCTGGCAGGTTCTCGTCCCCGCGCTGCCCGGCGCGGGCAGCAT CGGCGACCTGATGGACGTCGAGCTCGCCGTCGAGCGGGACCTGTGCCGCGCCGACCTGGCCGTGGTGGAGCTCGCCGAGC TCGCCATGACCAAGCTCGGCCTGCCGGTCTACCTGCTCTCCGACACATACTTCTCGGCCGCCCAGCTCGAGCGGCTGCTC AGCCGCCCGGAGCTCGCCGGGGTGCCGTTCACCCAGATCTTCACCTCCTCCGACTCGGGGATCAGCAAGAGCGACGGGCT GTTCCGGCACATGCTGGCGGCCTCGAACCTGCAGCCCTCGCGGGTCGTCCACCTCGGCGACCACCCGGTCGCGGACGTGG AGAGCGCCCGCGAGCACGGGCTGGTCGCCATCCACTACCCGAAGTACTCGGGTTCGCTGAAGGCGACGATCGAGCTGGAG GGCCTGCTCACCGGCCCCGGGGACGACACCCCCCTCGACGCCGCCAACGGCGACTACGGCATGACCGCGCTGCGGGCCCG CTCGCTGCACCGGGCGGACGCCGCCGCCGTCCCGCCGGGGCTGCGGCGCTACTGGGAGTCCGGGGCGACGGTGTTCGGCC CGGTCTTCACCGGGTTCGCCGACTGGGCGGTGGAACGCACCGGGGACCACGGCGCCGACCACATCTACTGCCTGATGCGG GAGGGTGACTTCCTCTCCCGGCTGATCGCCGACCCGGGTGCCGACGCCGGGGTGACCACCTCGACGCTGTGGGCGTCCCG GCAGGTCTGCGCGCTGGCCAACGTGTTCGAGGGCAGCCCCGAGGAGCTGCGCGGGTTCCTCGTCCGCCGGCACGCGCCCA GCGTCGGCCAGCTGCTGCGCCAGCTCGGGGTGGCCATCGACAACGTCGCCGGCATCTCCTCGCTCACCGACCGCCGGCTC GACGTCCCCGGCCTGCTCGACGACACTCTCGAGGCGCTGTGCTCCGACGAGCGCATCCGCAGCGAGATCGTGCTGACCGC CGGCCGGCTGCGTGACCGCTACGTCCAGTACCTCGACACCCAGCTGCCCGACTCGGGCCGCATCGTGCTGGTCGACCTGG GCTGGGGCGGCACCATCCAGGCGCTGCTCGCCCGGCTGCTCGCCTCCACCGGGCGCGAGTTCGACGTCGTCGGCCTGTAC ATGGCGACGAACGCCGCCGCCGGCACGCACCGCCTCGCCGGCCTGCAGATCGAGGGTTACGCGGCCTCCGGCGGGCAGCC CGAGCTGATGGCCAACCAGCTCATGCGCAGCCCCGAGGTGCTCGAACAGCTCTGTATGCCCGACATCGGCTCGCTGGTCT CCTTCGACGACGACGGCCGGCCCGTCCTGAGCATCGACCGGACGTCGCGGACCCAGGTCGCCCAGCGGACCGCCGTCCAG GACGGCATCCTCGCCTTCCAGCGGGAATGGCTGCGCTACCGGCGCTCGGAGACGGCGATGCCGTCGCTGTCCGAGCCCGG GGCCCGGCACGCGTCGCTGCGGACGCTGACCCGGTTCGTCTCCCGTCCCACCGCGGCCGAGGCGTCGGCGTTCGGGGCCT GGGCGCACGACGACAACTTCGGCTCCGACTCCACCGAGGGCCTGCTCCCGCCCGAGCTGGTCCGCCGGATGCCCTACCTG ACCCCCGCGGACGTCGAGAAGATCACGATGCGGGAGCTGTACTGGCCCGCGGGCGTGGCCGGAGTCGCGAACCGGTCGCT CGCGGTGATCAGCGGCCTGGCGGCCGCGGCCGGGGTGCCCGCCGAGGAGGTCTCCCCGGAGGCCGCGGCCGGCCCCGTCG AGGTGTACGTCGACACCGGCACCGACTTCGTCCACGGGCAGAAGGAGACCGCGGTCACCCGTTCCGGCCGGGACGGGATG TCGATCGTGCGCCTGCGCATCGACGGGGTCGGCGTCCGGCGGGTGCGCATCGACCCGGCCGGCCGGCGCGGCCTGCTCCG TCTCGACTGGCTGACGATCTCGTTCCACCTGCACAACGCCGTCGAGCCGTACAAGGTGACCGTCACGTCGCTGGACGACC TCGCCGGCCAGCAGATCGCGCTGGTCGGGGTCCGCCTGCTGCAGGCCAACCTGCTGGAGATCGTCGGCGACGATCCCCAG ATCATCTACACGATTGACTTCACCTCCCAGCCCACGCTGGGCGGAACGTACGCGATCGAGGTCGAGATGGCTTTCGGCTG GTTGGGGATCCGGGCCGACACGCTTCAGGTGCGCACGGCCGGTGTCGCCCGCACCGGCCTGCCCGTCCGCGCCGCCCGCA AGATCCGTCGCGAGCTGGGCGGCCTGCGATGA
Upstream 100 bases:
>100_bases CCGAACACCGCGTCTCGTACCCGAGCCGCATGTTCCCGCCGGGCGCCTGGCCGGCCCAGAAGAGGTGACCGGGGACCCGG TCGCCTGGAGGGGGCGGGCA
Downstream 100 bases:
>100_bases CGTCCGAGCCCGGCGGCCCGGACGACACCGACGGGACCGGCCGGGACCGTGCGGACAGCCGGGACCGTGCGACCCTGGGG CGGGATGCCGGGAGGCAGCC
Product: HAD family hydrolase
Products: NA
Alternate protein names: Hydrolase; Hydrolase Protein; Haloacid Dehalogenase Domain Protein Hydrolase; Haloacid Dehalogenase Domain-Containing Protein Hydrolase; Xsa-Associated Protein; HAD Family Hydrolase; HAD Superfamily Hydrolase-Like Protein; Glycosyl Transferase
Number of amino acids: Translated: 863; Mature: 863
Protein sequence:
>863_residues MFTDVRLREVWSHLESGGAQALTLDVFDTLLWRMVPEPVHAFITLGHRLADLGQLPSGVTPGEFARLRVFAEHKARLHSH EVRGTHEVRLDEIWQVLVPALPGAGSIGDLMDVELAVERDLCRADLAVVELAELAMTKLGLPVYLLSDTYFSAAQLERLL SRPELAGVPFTQIFTSSDSGISKSDGLFRHMLAASNLQPSRVVHLGDHPVADVESAREHGLVAIHYPKYSGSLKATIELE GLLTGPGDDTPLDAANGDYGMTALRARSLHRADAAAVPPGLRRYWESGATVFGPVFTGFADWAVERTGDHGADHIYCLMR EGDFLSRLIADPGADAGVTTSTLWASRQVCALANVFEGSPEELRGFLVRRHAPSVGQLLRQLGVAIDNVAGISSLTDRRL DVPGLLDDTLEALCSDERIRSEIVLTAGRLRDRYVQYLDTQLPDSGRIVLVDLGWGGTIQALLARLLASTGREFDVVGLY MATNAAAGTHRLAGLQIEGYAASGGQPELMANQLMRSPEVLEQLCMPDIGSLVSFDDDGRPVLSIDRTSRTQVAQRTAVQ DGILAFQREWLRYRRSETAMPSLSEPGARHASLRTLTRFVSRPTAAEASAFGAWAHDDNFGSDSTEGLLPPELVRRMPYL TPADVEKITMRELYWPAGVAGVANRSLAVISGLAAAAGVPAEEVSPEAAAGPVEVYVDTGTDFVHGQKETAVTRSGRDGM SIVRLRIDGVGVRRVRIDPAGRRGLLRLDWLTISFHLHNAVEPYKVTVTSLDDLAGQQIALVGVRLLQANLLEIVGDDPQ IIYTIDFTSQPTLGGTYAIEVEMAFGWLGIRADTLQVRTAGVARTGLPVRAARKIRRELGGLR
Sequences:
>Translated_863_residues MFTDVRLREVWSHLESGGAQALTLDVFDTLLWRMVPEPVHAFITLGHRLADLGQLPSGVTPGEFARLRVFAEHKARLHSH EVRGTHEVRLDEIWQVLVPALPGAGSIGDLMDVELAVERDLCRADLAVVELAELAMTKLGLPVYLLSDTYFSAAQLERLL SRPELAGVPFTQIFTSSDSGISKSDGLFRHMLAASNLQPSRVVHLGDHPVADVESAREHGLVAIHYPKYSGSLKATIELE GLLTGPGDDTPLDAANGDYGMTALRARSLHRADAAAVPPGLRRYWESGATVFGPVFTGFADWAVERTGDHGADHIYCLMR EGDFLSRLIADPGADAGVTTSTLWASRQVCALANVFEGSPEELRGFLVRRHAPSVGQLLRQLGVAIDNVAGISSLTDRRL DVPGLLDDTLEALCSDERIRSEIVLTAGRLRDRYVQYLDTQLPDSGRIVLVDLGWGGTIQALLARLLASTGREFDVVGLY MATNAAAGTHRLAGLQIEGYAASGGQPELMANQLMRSPEVLEQLCMPDIGSLVSFDDDGRPVLSIDRTSRTQVAQRTAVQ DGILAFQREWLRYRRSETAMPSLSEPGARHASLRTLTRFVSRPTAAEASAFGAWAHDDNFGSDSTEGLLPPELVRRMPYL TPADVEKITMRELYWPAGVAGVANRSLAVISGLAAAAGVPAEEVSPEAAAGPVEVYVDTGTDFVHGQKETAVTRSGRDGM SIVRLRIDGVGVRRVRIDPAGRRGLLRLDWLTISFHLHNAVEPYKVTVTSLDDLAGQQIALVGVRLLQANLLEIVGDDPQ IIYTIDFTSQPTLGGTYAIEVEMAFGWLGIRADTLQVRTAGVARTGLPVRAARKIRRELGGLR >Mature_863_residues MFTDVRLREVWSHLESGGAQALTLDVFDTLLWRMVPEPVHAFITLGHRLADLGQLPSGVTPGEFARLRVFAEHKARLHSH EVRGTHEVRLDEIWQVLVPALPGAGSIGDLMDVELAVERDLCRADLAVVELAELAMTKLGLPVYLLSDTYFSAAQLERLL SRPELAGVPFTQIFTSSDSGISKSDGLFRHMLAASNLQPSRVVHLGDHPVADVESAREHGLVAIHYPKYSGSLKATIELE GLLTGPGDDTPLDAANGDYGMTALRARSLHRADAAAVPPGLRRYWESGATVFGPVFTGFADWAVERTGDHGADHIYCLMR EGDFLSRLIADPGADAGVTTSTLWASRQVCALANVFEGSPEELRGFLVRRHAPSVGQLLRQLGVAIDNVAGISSLTDRRL DVPGLLDDTLEALCSDERIRSEIVLTAGRLRDRYVQYLDTQLPDSGRIVLVDLGWGGTIQALLARLLASTGREFDVVGLY MATNAAAGTHRLAGLQIEGYAASGGQPELMANQLMRSPEVLEQLCMPDIGSLVSFDDDGRPVLSIDRTSRTQVAQRTAVQ DGILAFQREWLRYRRSETAMPSLSEPGARHASLRTLTRFVSRPTAAEASAFGAWAHDDNFGSDSTEGLLPPELVRRMPYL TPADVEKITMRELYWPAGVAGVANRSLAVISGLAAAAGVPAEEVSPEAAAGPVEVYVDTGTDFVHGQKETAVTRSGRDGM SIVRLRIDGVGVRRVRIDPAGRRGLLRLDWLTISFHLHNAVEPYKVTVTSLDDLAGQQIALVGVRLLQANLLEIVGDDPQ IIYTIDFTSQPTLGGTYAIEVEMAFGWLGIRADTLQVRTAGVARTGLPVRAARKIRRELGGLR
Specific function: Unknown
COG id: COG5610
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 93619; Mature: 93619
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: PS00761 SPASE_I_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTDVRLREVWSHLESGGAQALTLDVFDTLLWRMVPEPVHAFITLGHRLADLGQLPSGVT CCCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCC PGEFARLRVFAEHKARLHSHEVRGTHEVRLDEIWQVLVPALPGAGSIGDLMDVELAVERD CCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH LCRADLAVVELAELAMTKLGLPVYLLSDTYFSAAQLERLLSRPELAGVPFTQIFTSSDSG HHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCHHHEEECCCCC ISKSDGLFRHMLAASNLQPSRVVHLGDHPVADVESAREHGLVAIHYPKYSGSLKATIELE CCCCCHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCEEEEEECCCCCCEEEEEEEE GLLTGPGDDTPLDAANGDYGMTALRARSLHRADAAAVPPGLRRYWESGATVFGPVFTGFA EEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEHHHHHHHH DWAVERTGDHGADHIYCLMREGDFLSRLIADPGADAGVTTSTLWASRQVCALANVFEGSP HHHHCCCCCCCCCEEEEEEECCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCH EELRGFLVRRHAPSVGQLLRQLGVAIDNVAGISSLTDRRLDVPGLLDDTLEALCSDERIR HHHHHHHHHCCCCHHHHHHHHHCHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHCCHHHH SEIVLTAGRLRDRYVQYLDTQLPDSGRIVLVDLGWGGTIQALLARLLASTGREFDVVGLY HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEE MATNAAAGTHRLAGLQIEGYAASGGQPELMANQLMRSPEVLEQLCMPDIGSLVSFDDDGR EECCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCC PVLSIDRTSRTQVAQRTAVQDGILAFQREWLRYRRSETAMPSLSEPGARHASLRTLTRFV EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH SRPTAAEASAFGAWAHDDNFGSDSTEGLLPPELVRRMPYLTPADVEKITMRELYWPAGVA CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCCHH GVANRSLAVISGLAAAAGVPAEEVSPEAAAGPVEVYVDTGTDFVHGQKETAVTRSGRDGM HHCCCHHHHHHHHHHHCCCCHHHCCCCCCCCCEEEEEECCCCCCCCCCHHHHCCCCCCCC SIVRLRIDGVGVRRVRIDPAGRRGLLRLDWLTISFHLHNAVEPYKVTVTSLDDLAGQQIA EEEEEEECCCEEEEEEECCCCCCCEEEEEEEEEEEEECCCCCCEEEEEEEHHHHCCCHHH LVGVRLLQANLLEIVGDDPQIIYTIDFTSQPTLGGTYAIEVEMAFGWLGIRADTLQVRTA HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEEEEEEEEEEEEEECEEEEEEC GVARTGLPVRAARKIRRELGGLR CCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MFTDVRLREVWSHLESGGAQALTLDVFDTLLWRMVPEPVHAFITLGHRLADLGQLPSGVT CCCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCC PGEFARLRVFAEHKARLHSHEVRGTHEVRLDEIWQVLVPALPGAGSIGDLMDVELAVERD CCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH LCRADLAVVELAELAMTKLGLPVYLLSDTYFSAAQLERLLSRPELAGVPFTQIFTSSDSG HHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCHHHEEECCCCC ISKSDGLFRHMLAASNLQPSRVVHLGDHPVADVESAREHGLVAIHYPKYSGSLKATIELE CCCCCHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCEEEEEECCCCCCEEEEEEEE GLLTGPGDDTPLDAANGDYGMTALRARSLHRADAAAVPPGLRRYWESGATVFGPVFTGFA EEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEHHHHHHHH DWAVERTGDHGADHIYCLMREGDFLSRLIADPGADAGVTTSTLWASRQVCALANVFEGSP HHHHCCCCCCCCCEEEEEEECCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCH EELRGFLVRRHAPSVGQLLRQLGVAIDNVAGISSLTDRRLDVPGLLDDTLEALCSDERIR HHHHHHHHHCCCCHHHHHHHHHCHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHCCHHHH SEIVLTAGRLRDRYVQYLDTQLPDSGRIVLVDLGWGGTIQALLARLLASTGREFDVVGLY HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEE MATNAAAGTHRLAGLQIEGYAASGGQPELMANQLMRSPEVLEQLCMPDIGSLVSFDDDGR EECCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCC PVLSIDRTSRTQVAQRTAVQDGILAFQREWLRYRRSETAMPSLSEPGARHASLRTLTRFV EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH SRPTAAEASAFGAWAHDDNFGSDSTEGLLPPELVRRMPYLTPADVEKITMRELYWPAGVA CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCCHH GVANRSLAVISGLAAAAGVPAEEVSPEAAAGPVEVYVDTGTDFVHGQKETAVTRSGRDGM HHCCCHHHHHHHHHHHCCCCHHHCCCCCCCCCEEEEEECCCCCCCCCCHHHHCCCCCCCC SIVRLRIDGVGVRRVRIDPAGRRGLLRLDWLTISFHLHNAVEPYKVTVTSLDDLAGQQIA EEEEEEECCCEEEEEEECCCCCCCEEEEEEEEEEEEECCCCCCEEEEEEEHHHHCCCHHH LVGVRLLQANLLEIVGDDPQIIYTIDFTSQPTLGGTYAIEVEMAFGWLGIRADTLQVRTA HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEEEEEEEEEEEEEECEEEEEEC GVARTGLPVRAARKIRRELGGLR CCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA