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The map label for this gene is uidR [C]

Identifier: 158317468

GI number: 158317468

Start: 6942216

End: 6943091

Strand: Reverse

Name: uidR [C]

Synonym: Franean1_5720

Alternate gene names: 158317468

Gene position: 6943091-6942216 (Counterclockwise)

Preceding gene: 158317470

Following gene: 158317467

Centisome position: 77.3

GC content: 71.92

Gene sequence:

>876_bases
GTGGTCGCTGGGCACGTGCGTCCGCAGGGGGTGGACACTCGCACGCGGATCCTGTCGGCCGCTGTGGAGCTCTTCGCGGA
ACGAGGGTATGCGGGCACCTCGGTCCGTGACATCTCTGAGCGACTCGGAGTGACGAAGGCCGCGCTTTACTACCACTTCT
CGTCCAAGGAGACGATCCTTGACGCGCTGATCTCCCCGTTCGTCTCCAGGTTGGAGCAACTGGTCGAGCTCGCCCGCCAG
GATCCGCCGCCGCGGGCGATCCTCGAGGGCATGGTCGCCCTGCTGGTGGAGACCGGGGGAGTGCTCTGCGCCTTCGCGAA
CGATCCGTCGGTGCTGCACCGGCGAATCGGAAAGGACGACATCACCTCCCAGCAGGAGGTGATCGTCCGGGCGATCGCCG
GGCCGGATCCCACCCCGGCTCGGATGCTGCGGGCCCGCTGCGCGGTCGGGTGCATCCAGAGCGGGGTCCTTGGGACCGCC
GTCGAGCGGGTCCGGGGCGCCGCGGGCGGGCCCGAGGCCGCCGGCGCCGGGCGTGCCACCAGCGTCACCACCACCGGCGT
GGGGATCGCGCGTGGCATCCGGGCCCTGAGCAGCTTTACTGGATGCGGCGGCGCGGCTGTTCCGGACGGCGCGGCGGACC
CGGCATCGCAGCCGGGCACTCCCGCGGCGGACGGCATCCAGACAGTCGGCGACGCCCGCCCGGTGCGCACCGCGACTGAC
ACCCATGCACGAGACAGGGGTGTCCGTGCTCCGGGCGGCGTCGGTGCGCTGTCCCCACTCGCGCCGCTGCTGCCGACAGA
ACTTCAGCGTGTGATCGTGGAGGCTGCTCTTGCCGCGCTCGGATCCGAGCAGCCCGTGGACCCGCCGGCGCGGTGA

Upstream 100 bases:

>100_bases
GATCGGGGGGATCTGGCCGCCCGCCAGCTTACCGATCGTTCAGTAGGTAGGAGTCAGAGTAACATTCGCGGCTGACTCGT
TCTCTGGGGGTGCAGAGCTG

Downstream 100 bases:

>100_bases
CGGGAGGCGGGAGGACGTGCCCTCCGGGCGCGTCGTCCCCCCGCGTCACAACCCCGGCGGGACGCCGTCCGGCGGAAGAT
CGGCCGGCGGGACGTCGGTT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Regulatory Protein TetR; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator; TetR-Family Regulator; TetR-Family Transcriptional Regulator; Trancscriptional Regulator TetR; Gamma-Butyrolactone Autoregulator Receptor; TetR Family Regulator

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MVAGHVRPQGVDTRTRILSAAVELFAERGYAGTSVRDISERLGVTKAALYYHFSSKETILDALISPFVSRLEQLVELARQ
DPPPRAILEGMVALLVETGGVLCAFANDPSVLHRRIGKDDITSQQEVIVRAIAGPDPTPARMLRARCAVGCIQSGVLGTA
VERVRGAAGGPEAAGAGRATSVTTTGVGIARGIRALSSFTGCGGAAVPDGAADPASQPGTPAADGIQTVGDARPVRTATD
THARDRGVRAPGGVGALSPLAPLLPTELQRVIVEAALAALGSEQPVDPPAR

Sequences:

>Translated_291_residues
MVAGHVRPQGVDTRTRILSAAVELFAERGYAGTSVRDISERLGVTKAALYYHFSSKETILDALISPFVSRLEQLVELARQ
DPPPRAILEGMVALLVETGGVLCAFANDPSVLHRRIGKDDITSQQEVIVRAIAGPDPTPARMLRARCAVGCIQSGVLGTA
VERVRGAAGGPEAAGAGRATSVTTTGVGIARGIRALSSFTGCGGAAVPDGAADPASQPGTPAADGIQTVGDARPVRTATD
THARDRGVRAPGGVGALSPLAPLLPTELQRVIVEAALAALGSEQPVDPPAR
>Mature_291_residues
MVAGHVRPQGVDTRTRILSAAVELFAERGYAGTSVRDISERLGVTKAALYYHFSSKETILDALISPFVSRLEQLVELARQ
DPPPRAILEGMVALLVETGGVLCAFANDPSVLHRRIGKDDITSQQEVIVRAIAGPDPTPARMLRARCAVGCIQSGVLGTA
VERVRGAAGGPEAAGAGRATSVTTTGVGIARGIRALSSFTGCGGAAVPDGAADPASQPGTPAADGIQTVGDARPVRTATD
THARDRGVRAPGGVGALSPLAPLLPTELQRVIVEAALAALGSEQPVDPPAR

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29838; Mature: 29838

Theoretical pI: Translated: 7.97; Mature: 7.97

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAGHVRPQGVDTRTRILSAAVELFAERGYAGTSVRDISERLGVTKAALYYHFSSKETIL
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHEECCCHHHHH
DALISPFVSRLEQLVELARQDPPPRAILEGMVALLVETGGVLCAFANDPSVLHRRIGKDD
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHCCCCC
ITSQQEVIVRAIAGPDPTPARMLRARCAVGCIQSGVLGTAVERVRGAAGGPEAAGAGRAT
CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCC
SVTTTGVGIARGIRALSSFTGCGGAAVPDGAADPASQPGTPAADGIQTVGDARPVRTATD
EEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCH
THARDRGVRAPGGVGALSPLAPLLPTELQRVIVEAALAALGSEQPVDPPAR
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MVAGHVRPQGVDTRTRILSAAVELFAERGYAGTSVRDISERLGVTKAALYYHFSSKETIL
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHEECCCHHHHH
DALISPFVSRLEQLVELARQDPPPRAILEGMVALLVETGGVLCAFANDPSVLHRRIGKDD
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHCCCCC
ITSQQEVIVRAIAGPDPTPARMLRARCAVGCIQSGVLGTAVERVRGAAGGPEAAGAGRAT
CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCC
SVTTTGVGIARGIRALSSFTGCGGAAVPDGAADPASQPGTPAADGIQTVGDARPVRTATD
EEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCH
THARDRGVRAPGGVGALSPLAPLLPTELQRVIVEAALAALGSEQPVDPPAR
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA