Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158317467

Identifier: 158317467

GI number: 158317467

Start: 6941579

End: 6942199

Strand: Reverse

Name: 158317467

Synonym: Franean1_5719

Alternate gene names: NA

Gene position: 6942199-6941579 (Counterclockwise)

Preceding gene: 158317468

Following gene: 158317466

Centisome position: 77.29

GC content: 71.18

Gene sequence:

>621_bases
GTGCCCTCCGGGCGCGTCGTCCCCCCGCGTCACAACCCCGGCGGGACGCCGTCCGGCGGAAGATCGGCCGGCGGGACGTC
GGTTGGCGGGATGTCGGCCGGACGACAGGCGGCCGGCGTGCTGGCGGTGGTCGCCCTGGCGGCCTCCGTGGCGGCGTGCG
CCGGGCTCACGGGTGCCGGGAGCGTGCCGGTGCCCGAGCCCCCCGGGGCGGCTGCCCGGAACGCGGCGGGCGCGGGAGCA
CCGGGGGCGGTCACCGAGACCGTCACCGTGCGGGTTCGCGACCGGACGGTCACGGCAGAAGTCGCCGACAGTGACGACGA
GCGGCGCCGTGGCCTGATGTATCGAACCTGGCTTCCGCCCGACCACGGCATGATCTTTGATTTTGGCGGTGAGACGACGT
CCGGCTTCTACATGTTCCGGACGTTGCTGCCTCTTTCGATCATGTTTGTCCGAGACGGTAGGGTTGTCAGCGTGCGGGAG
ATGACGCCGTGTTCGGGCGACGATCCGTCGGCCTGCCCGGTCTACTACCCGGACGGGGCATACACACACGCAGTGGAGGC
ACCGGCACACACCTTCGCCGGAGTCGCCACCAGTGATCCGGTGGCGATCGGTTCGGACTGA

Upstream 100 bases:

>100_bases
CCGACAGAACTTCAGCGTGTGATCGTGGAGGCTGCTCTTGCCGCGCTCGGATCCGAGCAGCCCGTGGACCCGCCGGCGCG
GTGACGGGAGGCGGGAGGAC

Downstream 100 bases:

>100_bases
CGGCAGGGTGTAGCCGATGGTCGGCAGATGTGGTGGCTCCCGCGGGCGTGAGCTACGTCTCGATGTCCGGTAGATGTCAA
TGCTGTGTCATTCCACGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MPSGRVVPPRHNPGGTPSGGRSAGGTSVGGMSAGRQAAGVLAVVALAASVAACAGLTGAGSVPVPEPPGAAARNAAGAGA
PGAVTETVTVRVRDRTVTAEVADSDDERRRGLMYRTWLPPDHGMIFDFGGETTSGFYMFRTLLPLSIMFVRDGRVVSVRE
MTPCSGDDPSACPVYYPDGAYTHAVEAPAHTFAGVATSDPVAIGSD

Sequences:

>Translated_206_residues
MPSGRVVPPRHNPGGTPSGGRSAGGTSVGGMSAGRQAAGVLAVVALAASVAACAGLTGAGSVPVPEPPGAAARNAAGAGA
PGAVTETVTVRVRDRTVTAEVADSDDERRRGLMYRTWLPPDHGMIFDFGGETTSGFYMFRTLLPLSIMFVRDGRVVSVRE
MTPCSGDDPSACPVYYPDGAYTHAVEAPAHTFAGVATSDPVAIGSD
>Mature_205_residues
PSGRVVPPRHNPGGTPSGGRSAGGTSVGGMSAGRQAAGVLAVVALAASVAACAGLTGAGSVPVPEPPGAAARNAAGAGAP
GAVTETVTVRVRDRTVTAEVADSDDERRRGLMYRTWLPPDHGMIFDFGGETTSGFYMFRTLLPLSIMFVRDGRVVSVREM
TPCSGDDPSACPVYYPDGAYTHAVEAPAHTFAGVATSDPVAIGSD

Specific function: Unknown

COG id: COG1430

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20844; Mature: 20712

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSGRVVPPRHNPGGTPSGGRSAGGTSVGGMSAGRQAAGVLAVVALAASVAACAGLTGAG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
SVPVPEPPGAAARNAAGAGAPGAVTETVTVRVRDRTVTAEVADSDDERRRGLMYRTWLPP
CCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCEEEEEECCCCHHHHCCCEEEECCCC
DHGMIFDFGGETTSGFYMFRTLLPLSIMFVRDGRVVSVREMTPCSGDDPSACPVYYPDGA
CCCEEEECCCCCCCHHHHHHHHHHEEEEEEECCCEEEEEECCCCCCCCCCCCEEECCCCC
YTHAVEAPAHTFAGVATSDPVAIGSD
EEEEECCCCHHHCCCCCCCCEEECCC
>Mature Secondary Structure 
PSGRVVPPRHNPGGTPSGGRSAGGTSVGGMSAGRQAAGVLAVVALAASVAACAGLTGAG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
SVPVPEPPGAAARNAAGAGAPGAVTETVTVRVRDRTVTAEVADSDDERRRGLMYRTWLPP
CCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCEEEEEECCCCHHHHCCCEEEECCCC
DHGMIFDFGGETTSGFYMFRTLLPLSIMFVRDGRVVSVREMTPCSGDDPSACPVYYPDGA
CCCEEEECCCCCCCHHHHHHHHHHEEEEEEECCCEEEEEECCCCCCCCCCCCEEECCCCC
YTHAVEAPAHTFAGVATSDPVAIGSD
EEEEECCCCHHHCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA