| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317467
Identifier: 158317467
GI number: 158317467
Start: 6941579
End: 6942199
Strand: Reverse
Name: 158317467
Synonym: Franean1_5719
Alternate gene names: NA
Gene position: 6942199-6941579 (Counterclockwise)
Preceding gene: 158317468
Following gene: 158317466
Centisome position: 77.29
GC content: 71.18
Gene sequence:
>621_bases GTGCCCTCCGGGCGCGTCGTCCCCCCGCGTCACAACCCCGGCGGGACGCCGTCCGGCGGAAGATCGGCCGGCGGGACGTC GGTTGGCGGGATGTCGGCCGGACGACAGGCGGCCGGCGTGCTGGCGGTGGTCGCCCTGGCGGCCTCCGTGGCGGCGTGCG CCGGGCTCACGGGTGCCGGGAGCGTGCCGGTGCCCGAGCCCCCCGGGGCGGCTGCCCGGAACGCGGCGGGCGCGGGAGCA CCGGGGGCGGTCACCGAGACCGTCACCGTGCGGGTTCGCGACCGGACGGTCACGGCAGAAGTCGCCGACAGTGACGACGA GCGGCGCCGTGGCCTGATGTATCGAACCTGGCTTCCGCCCGACCACGGCATGATCTTTGATTTTGGCGGTGAGACGACGT CCGGCTTCTACATGTTCCGGACGTTGCTGCCTCTTTCGATCATGTTTGTCCGAGACGGTAGGGTTGTCAGCGTGCGGGAG ATGACGCCGTGTTCGGGCGACGATCCGTCGGCCTGCCCGGTCTACTACCCGGACGGGGCATACACACACGCAGTGGAGGC ACCGGCACACACCTTCGCCGGAGTCGCCACCAGTGATCCGGTGGCGATCGGTTCGGACTGA
Upstream 100 bases:
>100_bases CCGACAGAACTTCAGCGTGTGATCGTGGAGGCTGCTCTTGCCGCGCTCGGATCCGAGCAGCCCGTGGACCCGCCGGCGCG GTGACGGGAGGCGGGAGGAC
Downstream 100 bases:
>100_bases CGGCAGGGTGTAGCCGATGGTCGGCAGATGTGGTGGCTCCCGCGGGCGTGAGCTACGTCTCGATGTCCGGTAGATGTCAA TGCTGTGTCATTCCACGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MPSGRVVPPRHNPGGTPSGGRSAGGTSVGGMSAGRQAAGVLAVVALAASVAACAGLTGAGSVPVPEPPGAAARNAAGAGA PGAVTETVTVRVRDRTVTAEVADSDDERRRGLMYRTWLPPDHGMIFDFGGETTSGFYMFRTLLPLSIMFVRDGRVVSVRE MTPCSGDDPSACPVYYPDGAYTHAVEAPAHTFAGVATSDPVAIGSD
Sequences:
>Translated_206_residues MPSGRVVPPRHNPGGTPSGGRSAGGTSVGGMSAGRQAAGVLAVVALAASVAACAGLTGAGSVPVPEPPGAAARNAAGAGA PGAVTETVTVRVRDRTVTAEVADSDDERRRGLMYRTWLPPDHGMIFDFGGETTSGFYMFRTLLPLSIMFVRDGRVVSVRE MTPCSGDDPSACPVYYPDGAYTHAVEAPAHTFAGVATSDPVAIGSD >Mature_205_residues PSGRVVPPRHNPGGTPSGGRSAGGTSVGGMSAGRQAAGVLAVVALAASVAACAGLTGAGSVPVPEPPGAAARNAAGAGAP GAVTETVTVRVRDRTVTAEVADSDDERRRGLMYRTWLPPDHGMIFDFGGETTSGFYMFRTLLPLSIMFVRDGRVVSVREM TPCSGDDPSACPVYYPDGAYTHAVEAPAHTFAGVATSDPVAIGSD
Specific function: Unknown
COG id: COG1430
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20844; Mature: 20712
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSGRVVPPRHNPGGTPSGGRSAGGTSVGGMSAGRQAAGVLAVVALAASVAACAGLTGAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC SVPVPEPPGAAARNAAGAGAPGAVTETVTVRVRDRTVTAEVADSDDERRRGLMYRTWLPP CCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCEEEEEECCCCHHHHCCCEEEECCCC DHGMIFDFGGETTSGFYMFRTLLPLSIMFVRDGRVVSVREMTPCSGDDPSACPVYYPDGA CCCEEEECCCCCCCHHHHHHHHHHEEEEEEECCCEEEEEECCCCCCCCCCCCEEECCCCC YTHAVEAPAHTFAGVATSDPVAIGSD EEEEECCCCHHHCCCCCCCCEEECCC >Mature Secondary Structure PSGRVVPPRHNPGGTPSGGRSAGGTSVGGMSAGRQAAGVLAVVALAASVAACAGLTGAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC SVPVPEPPGAAARNAAGAGAPGAVTETVTVRVRDRTVTAEVADSDDERRRGLMYRTWLPP CCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCEEEEEECCCCHHHHCCCEEEECCCC DHGMIFDFGGETTSGFYMFRTLLPLSIMFVRDGRVVSVREMTPCSGDDPSACPVYYPDGA CCCEEEECCCCCCCHHHHHHHHHHEEEEEEECCCEEEEEECCCCCCCCCCCCEEECCCCC YTHAVEAPAHTFAGVATSDPVAIGSD EEEEECCCCHHHCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA