| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is mpr [H]
Identifier: 158317299
GI number: 158317299
Start: 6716515
End: 6717315
Strand: Reverse
Name: mpr [H]
Synonym: Franean1_5547
Alternate gene names: 158317299
Gene position: 6717315-6716515 (Counterclockwise)
Preceding gene: 158317300
Following gene: 158317296
Centisome position: 74.79
GC content: 58.93
Gene sequence:
>801_bases ATGAAACGCGCTGAGGGTGCCGCCGAGGAGGCTATTGATGAGAGCGTTGTTGAGGAGATCGCCCAAACGCTCGAGGTCGT CATCGGCGCGGACGACCGGGTGAGGATTCCGAATACCGATGCGGCGTTGTGGCAACGGTACTGCGCATTGCGAATTGAAT TCCCTAGCGGCGCAGTCTATCGTGGTACTGGGTTCTTTATCGGTCGGCGAACGGTGGCAACCGCCGGTCACTGCGTCTAT CTACACAATCAAGGCGGTTGGGCGCGAAGGATCGAGGTCATCCCGGGTTGTAACGGGACTGAACGTCCGCTTGGCTCTGC GAAGGCGACGACATTCCGGTCTACCGCCGGATGGACGAAGGAGCGGATTCCGGCTGCCGACTACGGGGCTATCCTGTTGC CCGATGGCGCCTTCAAAGGAAAGAATCTCGGCAGCTTCGGATTCGGCGTATTCCAAACGAACATCTTGCTGGCAAAGCCG GTAGTTCTAGCTGGATACCCAGGCGATAAGCCTTTTGCGCAACTGTGGGGGATGTCTCGACGTATTAAGACTGTCACGAC GACGCAGCTCGTCTACGACATCGATTCCATGGGCGGGCAGAGTGGTGCACCGGTCTATTTGAAGAATAACGGTAAGCGCT ACGTGGTTGGAATCCACAACTATGGAGCCTCCACGGGTAACTCTGCGACGCGGGTTACAGAGGCAGTAGCGGAAAACTTC CGGCGCTGGAGTAAGGCCAATGTGCCAGCGGCCGCACCGGCACCGGTGCGGCCGCTGGCCATGGCTGGCGCGGATTCCTA G
Upstream 100 bases:
>100_bases GATCCCGGGAAAGATGGGGCCGAGAGCCCGAAGTGCGCTCAGCAAGCCCCGGGAGGGTACCGATATAGTCGCAGTCATCC AGCGATTGTTGGCGCAAGCC
Downstream 100 bases:
>100_bases GACCAGTCGGATAGGGTGCCGTGGCCTGCCGCAATCCAACCTCGGCTCAGAGGGCGGCAGGCCTGGCCCCCAAAGTGAGG TTTCGGTGGATGGAAAGATC
Product: peptidase S1 and S6 chymotrypsin/Hap
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MKRAEGAAEEAIDESVVEEIAQTLEVVIGADDRVRIPNTDAALWQRYCALRIEFPSGAVYRGTGFFIGRRTVATAGHCVY LHNQGGWARRIEVIPGCNGTERPLGSAKATTFRSTAGWTKERIPAADYGAILLPDGAFKGKNLGSFGFGVFQTNILLAKP VVLAGYPGDKPFAQLWGMSRRIKTVTTTQLVYDIDSMGGQSGAPVYLKNNGKRYVVGIHNYGASTGNSATRVTEAVAENF RRWSKANVPAAAPAPVRPLAMAGADS
Sequences:
>Translated_266_residues MKRAEGAAEEAIDESVVEEIAQTLEVVIGADDRVRIPNTDAALWQRYCALRIEFPSGAVYRGTGFFIGRRTVATAGHCVY LHNQGGWARRIEVIPGCNGTERPLGSAKATTFRSTAGWTKERIPAADYGAILLPDGAFKGKNLGSFGFGVFQTNILLAKP VVLAGYPGDKPFAQLWGMSRRIKTVTTTQLVYDIDSMGGQSGAPVYLKNNGKRYVVGIHNYGASTGNSATRVTEAVAENF RRWSKANVPAAAPAPVRPLAMAGADS >Mature_266_residues MKRAEGAAEEAIDESVVEEIAQTLEVVIGADDRVRIPNTDAALWQRYCALRIEFPSGAVYRGTGFFIGRRTVATAGHCVY LHNQGGWARRIEVIPGCNGTERPLGSAKATTFRSTAGWTKERIPAADYGAILLPDGAFKGKNLGSFGFGVFQTNILLAKP VVLAGYPGDKPFAQLWGMSRRIKTVTTTQLVYDIDSMGGQSGAPVYLKNNGKRYVVGIHNYGASTGNSATRVTEAVAENF RRWSKANVPAAAPAPVRPLAMAGADS
Specific function: Unknown
COG id: COG3591
COG function: function code E; V8-like Glu-specific endopeptidase
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S1B family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009003 - InterPro: IPR000126 - InterPro: IPR018114 - InterPro: IPR001254 - InterPro: IPR008256 [H]
Pfam domain/function: PF00089 Trypsin [H]
EC number: NA
Molecular weight: Translated: 28509; Mature: 28509
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: PS00672 V8_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRAEGAAEEAIDESVVEEIAQTLEVVIGADDRVRIPNTDAALWQRYCALRIEFPSGAVY CCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCEEECCCCHHHHHHHHEEEEEECCCCCEE RGTGFFIGRRTVATAGHCVYLHNQGGWARRIEVIPGCNGTERPLGSAKATTFRSTAGWTK ECCEEEEECEEEECCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCEEEECCCCCHH ERIPAADYGAILLPDGAFKGKNLGSFGFGVFQTNILLAKPVVLAGYPGDKPFAQLWGMSR HCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHCCEEEECCEEEEECCCCCHHHHHCCCCC RIKTVTTTQLVYDIDSMGGQSGAPVYLKNNGKRYVVGIHNYGASTGNSATRVTEAVAENF CEEEEEEEHEEEEHHHCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHH RRWSKANVPAAAPAPVRPLAMAGADS HHHHHCCCCCCCCCCCCCEEECCCCC >Mature Secondary Structure MKRAEGAAEEAIDESVVEEIAQTLEVVIGADDRVRIPNTDAALWQRYCALRIEFPSGAVY CCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCEEECCCCHHHHHHHHEEEEEECCCCCEE RGTGFFIGRRTVATAGHCVYLHNQGGWARRIEVIPGCNGTERPLGSAKATTFRSTAGWTK ECCEEEEECEEEECCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCEEEECCCCCHH ERIPAADYGAILLPDGAFKGKNLGSFGFGVFQTNILLAKPVVLAGYPGDKPFAQLWGMSR HCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHCCEEEECCEEEEECCCCCHHHHHCCCCC RIKTVTTTQLVYDIDSMGGQSGAPVYLKNNGKRYVVGIHNYGASTGNSATRVTEAVAENF CEEEEEEEHEEEEHHHCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHH RRWSKANVPAAAPAPVRPLAMAGADS HHHHHCCCCCCCCCCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2105291; 9384377; 3145906; 7496533 [H]