The gene/protein map for NC_011770 is currently unavailable.
Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158317296

Identifier: 158317296

GI number: 158317296

Start: 6712275

End: 6712559

Strand: Reverse

Name: 158317296

Synonym: Franean1_5544

Alternate gene names: NA

Gene position: 6712559-6712275 (Counterclockwise)

Preceding gene: 158317299

Following gene: 158317295

Centisome position: 74.73

GC content: 67.02

Gene sequence:

>285_bases
ATGACGGACGTGGCTGCACAGCAAACATCGGTGGCGGCGGAACCGGTGTTGTTCGGCGTTGTCCGCTTCGAGGACGACGG
TTCCGGCCGGGTCCGGGACACGGTGATCACGTTCCGGTCCGCGGCGGATGCCGAAGCGTTCGCGCGGGATCGATGCTGGA
CGCGATACCAGGTGTCCGCATTGCGGTTCTTCGTGGAGGAGAAGCCGGCGGAGCTGGGTGACTGGATGGTGCTCGGCGGA
CACCTTGACCACCTCGTCACGCGACGGGCGGGGCGCTACCGGTGA

Upstream 100 bases:

>100_bases
GCCTGGGTGCGTCAGCGTACGTCCTGGCTGCCCCGACTCCGCGGGCTCATCCGCGGTCCGGCGGCTGCCTGTGGCGACCA
GGCAGGAAAGGAGTGATGGC

Downstream 100 bases:

>100_bases
GCACCCACGGCGGCCGGCCGCTGCGCGCCGATGTGCTCCGGGATCGGTCCCTGTCGACGGTGGTGACGCTGCCGTGGGGT
TCCGGAACCTGGGCGGTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 94; Mature: 93

Protein sequence:

>94_residues
MTDVAAQQTSVAAEPVLFGVVRFEDDGSGRVRDTVITFRSAADAEAFARDRCWTRYQVSALRFFVEEKPAELGDWMVLGG
HLDHLVTRRAGRYR

Sequences:

>Translated_94_residues
MTDVAAQQTSVAAEPVLFGVVRFEDDGSGRVRDTVITFRSAADAEAFARDRCWTRYQVSALRFFVEEKPAELGDWMVLGG
HLDHLVTRRAGRYR
>Mature_93_residues
TDVAAQQTSVAAEPVLFGVVRFEDDGSGRVRDTVITFRSAADAEAFARDRCWTRYQVSALRFFVEEKPAELGDWMVLGGH
LDHLVTRRAGRYR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10606; Mature: 10475

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDVAAQQTSVAAEPVLFGVVRFEDDGSGRVRDTVITFRSAADAEAFARDRCWTRYQVSA
CCCCCCCCHHCCCCCEEEEEEEECCCCCCCEEHHEEEECCCCCHHHHHHHHCCHHHHHHH
LRFFVEEKPAELGDWMVLGGHLDHLVTRRAGRYR
HHHHHHCCCCCCCCEEEECCHHHHHHHHHCCCCC
>Mature Secondary Structure 
TDVAAQQTSVAAEPVLFGVVRFEDDGSGRVRDTVITFRSAADAEAFARDRCWTRYQVSA
CCCCCCCHHCCCCCEEEEEEEECCCCCCCEEHHEEEECCCCCHHHHHHHHCCHHHHHHH
LRFFVEEKPAELGDWMVLGGHLDHLVTRRAGRYR
HHHHHHCCCCCCCCEEEECCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA