| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317300
Identifier: 158317300
GI number: 158317300
Start: 6719105
End: 6719386
Strand: Reverse
Name: 158317300
Synonym: Franean1_5548
Alternate gene names: NA
Gene position: 6719386-6719105 (Counterclockwise)
Preceding gene: 158317308
Following gene: 158317299
Centisome position: 74.81
GC content: 64.54
Gene sequence:
>282_bases ATGAGCGAACTGCGTCGCCATCGCGCGGACGTCTACGCGATCGCGCGACGCTACGGTGTGAGCAACATCCGTGTCTTCGG CTCCGTCGCCCGCGCCGAAGCAGACAACGCGAGCGACGTCGACCTCCTTGTCGATCTCGCTCCAGGACGAGGTCTGTTCG ATCTGGGCGGCTTCATCAGCGACACCGAGGCGACGCTCAATGTCCACGTTGACGTCACGACAGTTGCTGGACTACGACCC CGGCTCCGTCCGCAGGTCCTTGCCGAGGCCGTCGCACTGTGA
Upstream 100 bases:
>100_bases CCAGCGGCAAGGGTGACCTCGCGGCCCGCTTCAGTCACCTCCCGTCTGCCTCGAGGAGGTTGCTGTGACACCAGGCGTAG ATCATCACCGGAGGGTGACG
Downstream 100 bases:
>100_bases GGTCCGACGATGAGCGCCTCCGCGATATCGTCGAACATGCGGAACTGATCAGTACGCACCTTCCCGCCTCACGCGAGGAA CTCGACAAGGACGTCGTTCT
Product: DNA polymerase subunit beta
Products: NA
Alternate protein names: DNA Polymerase Beta Subunit; DNA Polymerase Beta-Like Protein; Nucleotidyltransferase; DNA Polymerase Subunit Beta; DNA Polymerase Beta-Like Region; DNA Polymerase Subunit Beta Domain-Containing Protein; Nucleotidyl-Transferase; DNA Polymerase Beta Domain-Containing Protein Region; Transcriptional Regulator XRE Family; Nucleotidyltransferase Domain-Containing Protein
Number of amino acids: Translated: 93; Mature: 92
Protein sequence:
>93_residues MSELRRHRADVYAIARRYGVSNIRVFGSVARAEADNASDVDLLVDLAPGRGLFDLGGFISDTEATLNVHVDVTTVAGLRP RLRPQVLAEAVAL
Sequences:
>Translated_93_residues MSELRRHRADVYAIARRYGVSNIRVFGSVARAEADNASDVDLLVDLAPGRGLFDLGGFISDTEATLNVHVDVTTVAGLRP RLRPQVLAEAVAL >Mature_92_residues SELRRHRADVYAIARRYGVSNIRVFGSVARAEADNASDVDLLVDLAPGRGLFDLGGFISDTEATLNVHVDVTTVAGLRPR LRPQVLAEAVAL
Specific function: Unknown
COG id: COG1669
COG function: function code R; Predicted nucleotidyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10046; Mature: 9914
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELRRHRADVYAIARRYGVSNIRVFGSVARAEADNASDVDLLVDLAPGRGLFDLGGFIS CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCEECCCCCCC DTEATLNVHVDVTTVAGLRPRLRPQVLAEAVAL CCCEEEEEEEEEEEECCCCCCCCHHHHHHHHCC >Mature Secondary Structure SELRRHRADVYAIARRYGVSNIRVFGSVARAEADNASDVDLLVDLAPGRGLFDLGGFIS CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCEECCCCCCC DTEATLNVHVDVTTVAGLRPRLRPQVLAEAVAL CCCEEEEEEEEEEEECCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA