Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158317295

Identifier: 158317295

GI number: 158317295

Start: 6711823

End: 6712278

Strand: Reverse

Name: 158317295

Synonym: Franean1_5543

Alternate gene names: NA

Gene position: 6712278-6711823 (Counterclockwise)

Preceding gene: 158317296

Following gene: 158317293

Centisome position: 74.73

GC content: 71.71

Gene sequence:

>456_bases
GTGAGCACCCACGGCGGCCGGCCGCTGCGCGCCGATGTGCTCCGGGATCGGTCCCTGTCGACGGTGGTGACGCTGCCGTG
GGGTTCCGGAACCTGGGCGGTGGTGATCCAATCGGGGTCGGACCTGGCGGACCTGCACCGGGCGCTGGCGGAGCTTCCGG
TGGGTCTGGAGTTCCACTCCGTGCACGGGACGGGGGACGTCATCCTCGTCTACCAGGTGCCCGCCGGGCAGGTGTCCCGG
CGGGAGCTGCTGCGGCTGACCGGCTCGGCCCTCGACATCCCGACGGGGTTCCCGGACCGGTCGCGGTGGATCACCCGTGA
GGAACAGCAGGCGTACCGCGCGGGGCACGCGGATGCGTTCGACGCGATCCGGGTCTATCTGAGTCGCCCCAGCGGCGACG
CTCCGGATGAAACAGGGTCAGGCTCGGTCAATCCTCGGGGGGGCGACCGAGCCTGA

Upstream 100 bases:

>100_bases
TGCGGTTCTTCGTGGAGGAGAAGCCGGCGGAGCTGGGTGACTGGATGGTGCTCGGCGGACACCTTGACCACCTCGTCACG
CGACGGGCGGGGCGCTACCG

Downstream 100 bases:

>100_bases
ACCGGCGAAGGGCCGGATCCGATGGTGACCATGCCATCGGATCCGGCCCTTTCGCATGCCCGACCGGCTCTACCGGACGC
TGTCGCACCGCTCGGCGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MSTHGGRPLRADVLRDRSLSTVVTLPWGSGTWAVVIQSGSDLADLHRALAELPVGLEFHSVHGTGDVILVYQVPAGQVSR
RELLRLTGSALDIPTGFPDRSRWITREEQQAYRAGHADAFDAIRVYLSRPSGDAPDETGSGSVNPRGGDRA

Sequences:

>Translated_151_residues
MSTHGGRPLRADVLRDRSLSTVVTLPWGSGTWAVVIQSGSDLADLHRALAELPVGLEFHSVHGTGDVILVYQVPAGQVSR
RELLRLTGSALDIPTGFPDRSRWITREEQQAYRAGHADAFDAIRVYLSRPSGDAPDETGSGSVNPRGGDRA
>Mature_150_residues
STHGGRPLRADVLRDRSLSTVVTLPWGSGTWAVVIQSGSDLADLHRALAELPVGLEFHSVHGTGDVILVYQVPAGQVSRR
ELLRLTGSALDIPTGFPDRSRWITREEQQAYRAGHADAFDAIRVYLSRPSGDAPDETGSGSVNPRGGDRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16254; Mature: 16123

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTHGGRPLRADVLRDRSLSTVVTLPWGSGTWAVVIQSGSDLADLHRALAELPVGLEFHS
CCCCCCCCCHHHHHCCCCCCEEEEECCCCCEEEEEEECCCCHHHHHHHHHHCCCCCEEEE
VHGTGDVILVYQVPAGQVSRRELLRLTGSALDIPTGFPDRSRWITREEQQAYRAGHADAF
ECCCCCEEEEEECCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHCCCCCHH
DAIRVYLSRPSGDAPDETGSGSVNPRGGDRA
HHHHHEEECCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
STHGGRPLRADVLRDRSLSTVVTLPWGSGTWAVVIQSGSDLADLHRALAELPVGLEFHS
CCCCCCCCHHHHHCCCCCCEEEEECCCCCEEEEEEECCCCHHHHHHHHHHCCCCCEEEE
VHGTGDVILVYQVPAGQVSRRELLRLTGSALDIPTGFPDRSRWITREEQQAYRAGHADAF
ECCCCCEEEEEECCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHCCCCCHH
DAIRVYLSRPSGDAPDETGSGSVNPRGGDRA
HHHHHEEECCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA