| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317295
Identifier: 158317295
GI number: 158317295
Start: 6711823
End: 6712278
Strand: Reverse
Name: 158317295
Synonym: Franean1_5543
Alternate gene names: NA
Gene position: 6712278-6711823 (Counterclockwise)
Preceding gene: 158317296
Following gene: 158317293
Centisome position: 74.73
GC content: 71.71
Gene sequence:
>456_bases GTGAGCACCCACGGCGGCCGGCCGCTGCGCGCCGATGTGCTCCGGGATCGGTCCCTGTCGACGGTGGTGACGCTGCCGTG GGGTTCCGGAACCTGGGCGGTGGTGATCCAATCGGGGTCGGACCTGGCGGACCTGCACCGGGCGCTGGCGGAGCTTCCGG TGGGTCTGGAGTTCCACTCCGTGCACGGGACGGGGGACGTCATCCTCGTCTACCAGGTGCCCGCCGGGCAGGTGTCCCGG CGGGAGCTGCTGCGGCTGACCGGCTCGGCCCTCGACATCCCGACGGGGTTCCCGGACCGGTCGCGGTGGATCACCCGTGA GGAACAGCAGGCGTACCGCGCGGGGCACGCGGATGCGTTCGACGCGATCCGGGTCTATCTGAGTCGCCCCAGCGGCGACG CTCCGGATGAAACAGGGTCAGGCTCGGTCAATCCTCGGGGGGGCGACCGAGCCTGA
Upstream 100 bases:
>100_bases TGCGGTTCTTCGTGGAGGAGAAGCCGGCGGAGCTGGGTGACTGGATGGTGCTCGGCGGACACCTTGACCACCTCGTCACG CGACGGGCGGGGCGCTACCG
Downstream 100 bases:
>100_bases ACCGGCGAAGGGCCGGATCCGATGGTGACCATGCCATCGGATCCGGCCCTTTCGCATGCCCGACCGGCTCTACCGGACGC TGTCGCACCGCTCGGCGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MSTHGGRPLRADVLRDRSLSTVVTLPWGSGTWAVVIQSGSDLADLHRALAELPVGLEFHSVHGTGDVILVYQVPAGQVSR RELLRLTGSALDIPTGFPDRSRWITREEQQAYRAGHADAFDAIRVYLSRPSGDAPDETGSGSVNPRGGDRA
Sequences:
>Translated_151_residues MSTHGGRPLRADVLRDRSLSTVVTLPWGSGTWAVVIQSGSDLADLHRALAELPVGLEFHSVHGTGDVILVYQVPAGQVSR RELLRLTGSALDIPTGFPDRSRWITREEQQAYRAGHADAFDAIRVYLSRPSGDAPDETGSGSVNPRGGDRA >Mature_150_residues STHGGRPLRADVLRDRSLSTVVTLPWGSGTWAVVIQSGSDLADLHRALAELPVGLEFHSVHGTGDVILVYQVPAGQVSRR ELLRLTGSALDIPTGFPDRSRWITREEQQAYRAGHADAFDAIRVYLSRPSGDAPDETGSGSVNPRGGDRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16254; Mature: 16123
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTHGGRPLRADVLRDRSLSTVVTLPWGSGTWAVVIQSGSDLADLHRALAELPVGLEFHS CCCCCCCCCHHHHHCCCCCCEEEEECCCCCEEEEEEECCCCHHHHHHHHHHCCCCCEEEE VHGTGDVILVYQVPAGQVSRRELLRLTGSALDIPTGFPDRSRWITREEQQAYRAGHADAF ECCCCCEEEEEECCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHCCCCCHH DAIRVYLSRPSGDAPDETGSGSVNPRGGDRA HHHHHEEECCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure STHGGRPLRADVLRDRSLSTVVTLPWGSGTWAVVIQSGSDLADLHRALAELPVGLEFHS CCCCCCCCHHHHHCCCCCCEEEEECCCCCEEEEEEECCCCHHHHHHHHHHCCCCCEEEE VHGTGDVILVYQVPAGQVSRRELLRLTGSALDIPTGFPDRSRWITREEQQAYRAGHADAF ECCCCCEEEEEECCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHCCCCCHH DAIRVYLSRPSGDAPDETGSGSVNPRGGDRA HHHHHEEECCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA