| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317293
Identifier: 158317293
GI number: 158317293
Start: 6710746
End: 6711150
Strand: Reverse
Name: 158317293
Synonym: Franean1_5541
Alternate gene names: NA
Gene position: 6711150-6710746 (Counterclockwise)
Preceding gene: 158317295
Following gene: 158317292
Centisome position: 74.72
GC content: 71.11
Gene sequence:
>405_bases ATGGCGGTTCCCCGGCGTATTCCCGTGCGCTTTGAGGACGTGTTCCCGACCGGTGCTTTCGTGCTCGGCGTGGAACCGGC GAACGACTACGAGAAGGTGAAGGCGAACGCCCCCGACCCGCAGGAACGGGACCCGAACACCGGCGAGCGGGTCTGGGTCG TGCGCGTGCTGGACCCGGACCCGGCGGCCCGGCAGGCAGAGCTGAAGGTGAAGGTTCCCGGTGAGGTTCAGCCGGTCCTG CCTGAGGCGATGCCGGGCACGCCGTTCCGGCCGGTGCTGTTCGACGGGCTGACGATCACGGCGTGGGTGGACACCAACGG CAAGTACCCCAAGCAGGCCTACGCCCTGCGCGCCCTGCGGCTGCGGCAGGTCGGCGCGGTGCGGCGGACGGGGGCGGCGG CATGA
Upstream 100 bases:
>100_bases AGAAGCTTGGCGAGCGCTCGGTGAGCGGTGCATGGTGGGTGTGCCCGACATACCCCGGACCACCCGGGGGCGGGGCTGAC CCTCGGAGGTTGACGAATCC
Downstream 100 bases:
>100_bases CCAGCCACGACACCGACCCGGCAGAAAACGCGGCGTAGCAACTCCTTCGTTTCCCGAGACCTTCCGCTTTTCCCTTTCTC TTCTTCCTGTGGTTTCGTGC
Product: plasmid replication, integration and excision activator
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MAVPRRIPVRFEDVFPTGAFVLGVEPANDYEKVKANAPDPQERDPNTGERVWVVRVLDPDPAARQAELKVKVPGEVQPVL PEAMPGTPFRPVLFDGLTITAWVDTNGKYPKQAYALRALRLRQVGAVRRTGAAA
Sequences:
>Translated_134_residues MAVPRRIPVRFEDVFPTGAFVLGVEPANDYEKVKANAPDPQERDPNTGERVWVVRVLDPDPAARQAELKVKVPGEVQPVL PEAMPGTPFRPVLFDGLTITAWVDTNGKYPKQAYALRALRLRQVGAVRRTGAAA >Mature_133_residues AVPRRIPVRFEDVFPTGAFVLGVEPANDYEKVKANAPDPQERDPNTGERVWVVRVLDPDPAARQAELKVKVPGEVQPVLP EAMPGTPFRPVLFDGLTITAWVDTNGKYPKQAYALRALRLRQVGAVRRTGAAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14741; Mature: 14610
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVPRRIPVRFEDVFPTGAFVLGVEPANDYEKVKANAPDPQERDPNTGERVWVVRVLDPD CCCCCCCCEEEECCCCCCEEEEEECCCCCHHEEECCCCCCCCCCCCCCCEEEEEEEECCC PAARQAELKVKVPGEVQPVLPEAMPGTPFRPVLFDGLTITAWVDTNGKYPKQAYALRALR CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEECCEEEEEEEECCCCCCHHHHHHHHHH LRQVGAVRRTGAAA HHHHCCCCCCCCCC >Mature Secondary Structure AVPRRIPVRFEDVFPTGAFVLGVEPANDYEKVKANAPDPQERDPNTGERVWVVRVLDPD CCCCCCCEEEECCCCCCEEEEEECCCCCHHEEECCCCCCCCCCCCCCCEEEEEEEECCC PAARQAELKVKVPGEVQPVLPEAMPGTPFRPVLFDGLTITAWVDTNGKYPKQAYALRALR CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEECCEEEEEEEECCCCCCHHHHHHHHHH LRQVGAVRRTGAAA HHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA