| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317292
Identifier: 158317292
GI number: 158317292
Start: 6709068
End: 6710621
Strand: Reverse
Name: 158317292
Synonym: Franean1_5540
Alternate gene names: NA
Gene position: 6710621-6709068 (Counterclockwise)
Preceding gene: 158317293
Following gene: 158317291
Centisome position: 74.71
GC content: 72.14
Gene sequence:
>1554_bases ATGTCCAGAATCTACGGTGACCAGCGGATGCCGCGGATTCCGTCCCGGCCGGACAAGATGCGGGTGCCGCTGTGGATGCT GCTCCTCGCGGTGGCGGGTAAGGGGCTGGTGCTCGGGGTGCGCTGGTGCTGGCGGCACCGGATCGCCGTCCCGGTCGCGG TCGGCCTGCTGGTGTTCGTCCACCGGTTCGGCCTGCTGGGCCTGGTGGGCCTGCTCGTCGGCCTGGCCGTCGCTGCGGTG GCCTGGTGGCGGGTCCACCCGGTGTCGTTCGGGTGGCTGGCGCAGTGGGTGTGGGGCCGGATCCGGCTGACGATCGTGTA CCGGCGACGGTGGCGGCCGGCGATGGTGCATACCGACCTGGCGATCCGGGTTCCCACCTCGAACGCCGATCAGGTCACCT TCGACGACTACTACCCGCGCATCCGGTCGATCCGCTCGACGCGGGCGGTGGACGTGCTGCGGGTGGAACTGCTGCCCGGC CAGACCCCGGAGCAGTGGGCGGAGCAGGCCGAAGCCCTGCGGCACGTGTTCCGGGCCCGGCGCTGCCAGGTCCAGGCCGA ACCGCACCGGTTCGTCCGGCTGCACTTCCACCACCGCGACACCCTCGTCCACCCCGTCACCCCCGGTGACCTCGACGGGC CCCGACCCGACGGGGCGGACGAGGACCACGGCGACGATCCCGGGGCCGGGTCGGGCCTGCTCGTCGCGGAGTTGGGCGCG GTACCGGTCGGGCGCTGTGAGGACGGATCCCCGTGGACCCTGCCTGTCCGCGGGACACATGTCCTCGTCGCGGGGGCGAC CGGGGCGGGTAAGGGCTCGGTGCTGTGGTCGATCATCCGCGGCCTGGGCCCGGCGGTCCGTGCCGGGCTGGTGGAGCTGT GGGTCTGCGACCCCAAGGGCGGCATGGAGCTGGCGTTCGGTGAGCCACTGTTCGCCCGGTTCGCCACCACCACCGGCGAG ATAGCGGATCTCCTCGACGACGCCGTGACGGTCATGCAACGCCGCACCGCCCGGCTGCGCGGCCGGACCCGACTACACAC CCCCACCGTCGGTGATCCGCTGATCGTGGTGGTCGTCGACGAAATCGCCTCCCTGACGGCGTACGTCACCGACCGGGACG TCAAGAAGCGGATCGGGGCGGCGCTGCCGCTGCTGCTCTCCCAGGGACGCGCCCCCGGCGTCGTGGTCCTGGCGGCGGTG CAAGACCCACGCAAGGAGGTGCTTCCCTTCCGGGACCTGTTCCCGGTCCGGGTCGCCCTGCGCATGACCGAAACCGAACA GCCGGATCTCGTGCTCGGTTCCGGTGCCCGGGACCGTGGGGCTCGGGCAGACGAGATCCCGCTGTCGCTGCCCGGAGTCG GCTACGTGCTCGCTGAGGGACAGCCCGAACCGGTCCGGGTCCGCGCGGCCCACATCGACGACACCGAAATCAGCCGCACC GTCTGGGCCTACCGGCCGTCGACAGCAACCGGCGGCGGGTGGACACCCGACCTCGATCCCTACAGCGACCCGGCCGACGG TGACGAACCGGCGGGCTGGGGTGAGGTCGCGTGA
Upstream 100 bases:
>100_bases AAAACGCGGCGTAGCAACTCCTTCGTTTCCCGAGACCTTCCGCTTTTCCCTTTCTCTTCTTCCTGTGGTTTCGTGCGCTC GAAAACAGGGTGGTATTGCC
Downstream 100 bases:
>100_bases CCGGCCCGGCCGCTGACCCGCCAGACCTGTCCGCGCCGCTGCCGGTCCTGCCGGTGTGTGCCACCTGCTCCCACCTCTAC ATCGCGCACCGGCGGGGCCG
Product: cell division protein FtsK/SpoIIIE
Products: NA
Alternate protein names: Protein FtsK/SpoIIIE; Plasmid Transfer Protein; FtsK/SpoIIIE Family Protein; DNA Segregation ATPase FtsK/SpoIIIE-Like Protein; DNA Segregation ATPase FtsK/SpoIIIE Family; DNA Segregation ATPase; DNA Segregation ATPase FtsK/SpoIIIE; Protein Ftsk/Spoiiie; Main Transfer Gene; DNA Segregation ATPase FtsK/SpoIIIE-Related Protein; Transfer Protein TraSA; TraB Protein; DNA Segregation ATPase FtsK/SpoIIIE Related Protein; Ftsk/SpoIIIE
Number of amino acids: Translated: 517; Mature: 516
Protein sequence:
>517_residues MSRIYGDQRMPRIPSRPDKMRVPLWMLLLAVAGKGLVLGVRWCWRHRIAVPVAVGLLVFVHRFGLLGLVGLLVGLAVAAV AWWRVHPVSFGWLAQWVWGRIRLTIVYRRRWRPAMVHTDLAIRVPTSNADQVTFDDYYPRIRSIRSTRAVDVLRVELLPG QTPEQWAEQAEALRHVFRARRCQVQAEPHRFVRLHFHHRDTLVHPVTPGDLDGPRPDGADEDHGDDPGAGSGLLVAELGA VPVGRCEDGSPWTLPVRGTHVLVAGATGAGKGSVLWSIIRGLGPAVRAGLVELWVCDPKGGMELAFGEPLFARFATTTGE IADLLDDAVTVMQRRTARLRGRTRLHTPTVGDPLIVVVVDEIASLTAYVTDRDVKKRIGAALPLLLSQGRAPGVVVLAAV QDPRKEVLPFRDLFPVRVALRMTETEQPDLVLGSGARDRGARADEIPLSLPGVGYVLAEGQPEPVRVRAAHIDDTEISRT VWAYRPSTATGGGWTPDLDPYSDPADGDEPAGWGEVA
Sequences:
>Translated_517_residues MSRIYGDQRMPRIPSRPDKMRVPLWMLLLAVAGKGLVLGVRWCWRHRIAVPVAVGLLVFVHRFGLLGLVGLLVGLAVAAV AWWRVHPVSFGWLAQWVWGRIRLTIVYRRRWRPAMVHTDLAIRVPTSNADQVTFDDYYPRIRSIRSTRAVDVLRVELLPG QTPEQWAEQAEALRHVFRARRCQVQAEPHRFVRLHFHHRDTLVHPVTPGDLDGPRPDGADEDHGDDPGAGSGLLVAELGA VPVGRCEDGSPWTLPVRGTHVLVAGATGAGKGSVLWSIIRGLGPAVRAGLVELWVCDPKGGMELAFGEPLFARFATTTGE IADLLDDAVTVMQRRTARLRGRTRLHTPTVGDPLIVVVVDEIASLTAYVTDRDVKKRIGAALPLLLSQGRAPGVVVLAAV QDPRKEVLPFRDLFPVRVALRMTETEQPDLVLGSGARDRGARADEIPLSLPGVGYVLAEGQPEPVRVRAAHIDDTEISRT VWAYRPSTATGGGWTPDLDPYSDPADGDEPAGWGEVA >Mature_516_residues SRIYGDQRMPRIPSRPDKMRVPLWMLLLAVAGKGLVLGVRWCWRHRIAVPVAVGLLVFVHRFGLLGLVGLLVGLAVAAVA WWRVHPVSFGWLAQWVWGRIRLTIVYRRRWRPAMVHTDLAIRVPTSNADQVTFDDYYPRIRSIRSTRAVDVLRVELLPGQ TPEQWAEQAEALRHVFRARRCQVQAEPHRFVRLHFHHRDTLVHPVTPGDLDGPRPDGADEDHGDDPGAGSGLLVAELGAV PVGRCEDGSPWTLPVRGTHVLVAGATGAGKGSVLWSIIRGLGPAVRAGLVELWVCDPKGGMELAFGEPLFARFATTTGEI ADLLDDAVTVMQRRTARLRGRTRLHTPTVGDPLIVVVVDEIASLTAYVTDRDVKKRIGAALPLLLSQGRAPGVVVLAAVQ DPRKEVLPFRDLFPVRVALRMTETEQPDLVLGSGARDRGARADEIPLSLPGVGYVLAEGQPEPVRVRAAHIDDTEISRTV WAYRPSTATGGGWTPDLDPYSDPADGDEPAGWGEVA
Specific function: Unknown
COG id: COG1674
COG function: function code D; DNA segregation ATPase FtsK/SpoIIIE and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56699; Mature: 56568
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: PS50901 FTSK
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRIYGDQRMPRIPSRPDKMRVPLWMLLLAVAGKGLVLGVRWCWRHRIAVPVAVGLLVFV CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEHHHHHHHCHHHHHHHHHHHHH HRFGLLGLVGLLVGLAVAAVAWWRVHPVSFGWLAQWVWGRIRLTIVYRRRWRPAMVHTDL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCEEEEEEEEECCCCCEEEECCE AIRVPTSNADQVTFDDYYPRIRSIRSTRAVDVLRVELLPGQTPEQWAEQAEALRHVFRAR EEEECCCCCCEEEEHHHHHHHHHHHHHHCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHH RCQVQAEPHRFVRLHFHHRDTLVHPVTPGDLDGPRPDGADEDHGDDPGAGSGLLVAELGA HCCCCCCCCEEEEEEEECCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC VPVGRCEDGSPWTLPVRGTHVLVAGATGAGKGSVLWSIIRGLGPAVRAGLVELWVCDPKG CCCCCCCCCCCEEEEECCCEEEEEECCCCCCHHHHHHHHHCCCHHHHCCEEEEEEECCCC GMELAFGEPLFARFATTTGEIADLLDDAVTVMQRRTARLRGRTRLHTPTVGDPLIVVVVD CEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEEEH EIASLTAYVTDRDVKKRIGAALPLLLSQGRAPGVVVLAAVQDPRKEVLPFRDLFPVRVAL HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHCCCCHHCCCEEEEE RMTETEQPDLVLGSGARDRGARADEIPLSLPGVGYVLAEGQPEPVRVRAAHIDDTEISRT EECCCCCCCEEEECCCCCCCCCCCCCCEECCCCEEEEECCCCCCEEEEEEECCCCHHHCE VWAYRPSTATGGGWTPDLDPYSDPADGDEPAGWGEVA EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SRIYGDQRMPRIPSRPDKMRVPLWMLLLAVAGKGLVLGVRWCWRHRIAVPVAVGLLVFV CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEHHHHHHHCHHHHHHHHHHHHH HRFGLLGLVGLLVGLAVAAVAWWRVHPVSFGWLAQWVWGRIRLTIVYRRRWRPAMVHTDL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCEEEEEEEEECCCCCEEEECCE AIRVPTSNADQVTFDDYYPRIRSIRSTRAVDVLRVELLPGQTPEQWAEQAEALRHVFRAR EEEECCCCCCEEEEHHHHHHHHHHHHHHCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHH RCQVQAEPHRFVRLHFHHRDTLVHPVTPGDLDGPRPDGADEDHGDDPGAGSGLLVAELGA HCCCCCCCCEEEEEEEECCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC VPVGRCEDGSPWTLPVRGTHVLVAGATGAGKGSVLWSIIRGLGPAVRAGLVELWVCDPKG CCCCCCCCCCCEEEEECCCEEEEEECCCCCCHHHHHHHHHCCCHHHHCCEEEEEEECCCC GMELAFGEPLFARFATTTGEIADLLDDAVTVMQRRTARLRGRTRLHTPTVGDPLIVVVVD CEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEEEH EIASLTAYVTDRDVKKRIGAALPLLLSQGRAPGVVVLAAVQDPRKEVLPFRDLFPVRVAL HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHCCCCHHCCCEEEEE RMTETEQPDLVLGSGARDRGARADEIPLSLPGVGYVLAEGQPEPVRVRAAHIDDTEISRT EECCCCCCCEEEECCCCCCCCCCCCCCEECCCCEEEEECCCCCCEEEEEEECCCCHHHCE VWAYRPSTATGGGWTPDLDPYSDPADGDEPAGWGEVA EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA