Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158317291

Identifier: 158317291

GI number: 158317291

Start: 6707141

End: 6708862

Strand: Reverse

Name: 158317291

Synonym: Franean1_5539

Alternate gene names: NA

Gene position: 6708862-6707141 (Counterclockwise)

Preceding gene: 158317292

Following gene: 158317290

Centisome position: 74.69

GC content: 71.84

Gene sequence:

>1722_bases
GTGACCCTCCCCTCCCTCACCGGCCCTGACCCGGCCGTCCCCCACGACCCCACCATCCGTGACGATCGTGACGATCGGCC
CGGCTCGCGGATGGCACGGATGCGAATGCCGCTCGCCCGTGCCGTCGTCGAAGCGGTCGCCGTGGAGAACGGGGTGTGCG
TTCGACCCATGGCCATGCGCCGCACGAACCTCGACACCGGCGAAACCGAGATCATCCCCGTGCCCTGCGGCGCGACCCTC
GCCAGCAAGTGCCCGCCGTGCGCGGAGAAGGCCCGGCGGCTGCGGATGGCGCAGTGCAAAGCGGGCTGGCATCTCGATGA
CGAACCCCTTCCCGACCCAGACCCGCCGTCCGATGACGCCAAGGTCCTCGCCGGGTTCCGCGCGGACCTGGAAGTCGCCC
GGCGCGACGCGGAACGGGACAGTGACCCGGCCGGCGTCGCCGAGATCGACACGCTTATCGACCAGGTGGACGACGAACTC
AACGCCCTGGGCGTCCGCGGCAAAGCCGCTCCCGACAACCGGGACCGGCCACGTCGTGCCCGCTCGACCCGCCGGCGGCA
GGACGCTGCCGATCTGCCGCGGCTGCCCGTGGAAAAGCGCACCGTCGGTCGGACGTACGAAGCGGCGGACGGCACGACCT
GGCGGCCGTCGATGTTCCTGACCCTCACCTGCGACACGTACGGCCGGGTGACCTCCGACGGCACTCCCGTCGATCCGGGC
TCGTACGACTACCGGCGGGCGGCCCGCGACGCGATCCACTTCCCGAAGCTGATCGACCGGTTCTGGCAGAACCTGCGTAG
GGCCGTGGGCTGGGATGTGCAGTACTTCGCCGCGCTCGAACCCCAACGGCGGCTCGCCCCGCACCTGCACGCGGCCGTCC
GCGGAACCGTGCCGCGGGCCCTGCTTCGGCAGGTGGCGGCAGCGACGTATCACCAGGTGTGGTGGCCACCCTGCGACCAG
GCGGTCTACCCGGACACGGCCCTCCCGACCTGGGCGAACGACACGAGTGGGTACGTCGATCCGGTTTCCGGCCGGTCGCT
GCCGACCTGGGACGCGGCCCTTGACGCCGTCGGAGACGAGGACGAACCGTCCCACGTGGTGCGCTTCGGCCCTCAACTGC
AAGCGGACGGCTTCACCGCGAACTCGGCGCACACCGGCCGCATGATCGGCTACCTGTGCAAGTACCTGACCAAGAGCCTC
GACGCCTGCCACGCGGCCACCACCGACCGGCAACGGCGGCACGTCGACCGGCTCGCCGAAGCCCTGCGCTACGAACCTTG
CGCCCCCACCTGCGCCAACTGGCTCCGCTACGGGATCCAGCCGAAGAACCCGAAACCGGGTCTCGTCCCGGGCCGCTGCC
GCGGCAAGGCGCACCGGCGGGAGACCCTCGGCTTCGGCGGACGGCGGGTGCTGGTCAGTCGCAAGTGGTCCGGCAAGACA
CTGACCGACCACAAGCATGATCGCGTCGCGTTCATCCGGGCACAGCTCGAAGCCCTCGGCCACACCGCCACCGGCCCGGC
CGCGGCGACCGACACCGACCCGGCGCGCACCGTCTGGACGCTGCTCCGGCCCGGCGACCCGGCCGCACCGCGGCGTGAAT
ACCTGCTGTTGCAGGCGGTCGCGCAACGCCACGCCTGGCGCGCACAGCTCGACGCGGCCCGGCGCACCGCACCCGACGAA
CTTCCGGCAATCGGCCCACCGGGCAGGGCACAAGCCGCCTGA

Upstream 100 bases:

>100_bases
GTGGCACCACCGACACCGGTCCTCGCTGCGGCTGCACCAGGTTCACCGAACCGGCCACCCTCGACCGCCCGGATCTCGAC
GTCTCGGAGGACCAGCCCGC

Downstream 100 bases:

>100_bases
CCGTCCGCCCTGACCCGTGGAGAGAACCGTGACCAAGCTTCTCCTGACTCCGGCGGAGGCTGCCGAGCTCCTCGGCGTCG
GCCGGACCACGATCTACGAA

Product: replication initiator protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 573; Mature: 572

Protein sequence:

>573_residues
MTLPSLTGPDPAVPHDPTIRDDRDDRPGSRMARMRMPLARAVVEAVAVENGVCVRPMAMRRTNLDTGETEIIPVPCGATL
ASKCPPCAEKARRLRMAQCKAGWHLDDEPLPDPDPPSDDAKVLAGFRADLEVARRDAERDSDPAGVAEIDTLIDQVDDEL
NALGVRGKAAPDNRDRPRRARSTRRRQDAADLPRLPVEKRTVGRTYEAADGTTWRPSMFLTLTCDTYGRVTSDGTPVDPG
SYDYRRAARDAIHFPKLIDRFWQNLRRAVGWDVQYFAALEPQRRLAPHLHAAVRGTVPRALLRQVAAATYHQVWWPPCDQ
AVYPDTALPTWANDTSGYVDPVSGRSLPTWDAALDAVGDEDEPSHVVRFGPQLQADGFTANSAHTGRMIGYLCKYLTKSL
DACHAATTDRQRRHVDRLAEALRYEPCAPTCANWLRYGIQPKNPKPGLVPGRCRGKAHRRETLGFGGRRVLVSRKWSGKT
LTDHKHDRVAFIRAQLEALGHTATGPAAATDTDPARTVWTLLRPGDPAAPRREYLLLQAVAQRHAWRAQLDAARRTAPDE
LPAIGPPGRAQAA

Sequences:

>Translated_573_residues
MTLPSLTGPDPAVPHDPTIRDDRDDRPGSRMARMRMPLARAVVEAVAVENGVCVRPMAMRRTNLDTGETEIIPVPCGATL
ASKCPPCAEKARRLRMAQCKAGWHLDDEPLPDPDPPSDDAKVLAGFRADLEVARRDAERDSDPAGVAEIDTLIDQVDDEL
NALGVRGKAAPDNRDRPRRARSTRRRQDAADLPRLPVEKRTVGRTYEAADGTTWRPSMFLTLTCDTYGRVTSDGTPVDPG
SYDYRRAARDAIHFPKLIDRFWQNLRRAVGWDVQYFAALEPQRRLAPHLHAAVRGTVPRALLRQVAAATYHQVWWPPCDQ
AVYPDTALPTWANDTSGYVDPVSGRSLPTWDAALDAVGDEDEPSHVVRFGPQLQADGFTANSAHTGRMIGYLCKYLTKSL
DACHAATTDRQRRHVDRLAEALRYEPCAPTCANWLRYGIQPKNPKPGLVPGRCRGKAHRRETLGFGGRRVLVSRKWSGKT
LTDHKHDRVAFIRAQLEALGHTATGPAAATDTDPARTVWTLLRPGDPAAPRREYLLLQAVAQRHAWRAQLDAARRTAPDE
LPAIGPPGRAQAA
>Mature_572_residues
TLPSLTGPDPAVPHDPTIRDDRDDRPGSRMARMRMPLARAVVEAVAVENGVCVRPMAMRRTNLDTGETEIIPVPCGATLA
SKCPPCAEKARRLRMAQCKAGWHLDDEPLPDPDPPSDDAKVLAGFRADLEVARRDAERDSDPAGVAEIDTLIDQVDDELN
ALGVRGKAAPDNRDRPRRARSTRRRQDAADLPRLPVEKRTVGRTYEAADGTTWRPSMFLTLTCDTYGRVTSDGTPVDPGS
YDYRRAARDAIHFPKLIDRFWQNLRRAVGWDVQYFAALEPQRRLAPHLHAAVRGTVPRALLRQVAAATYHQVWWPPCDQA
VYPDTALPTWANDTSGYVDPVSGRSLPTWDAALDAVGDEDEPSHVVRFGPQLQADGFTANSAHTGRMIGYLCKYLTKSLD
ACHAATTDRQRRHVDRLAEALRYEPCAPTCANWLRYGIQPKNPKPGLVPGRCRGKAHRRETLGFGGRRVLVSRKWSGKTL
TDHKHDRVAFIRAQLEALGHTATGPAAATDTDPARTVWTLLRPGDPAAPRREYLLLQAVAQRHAWRAQLDAARRTAPDEL
PAIGPPGRAQAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63336; Mature: 63205

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLPSLTGPDPAVPHDPTIRDDRDDRPGSRMARMRMPLARAVVEAVAVENGVCVRPMAMR
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHH
RTNLDTGETEIIPVPCGATLASKCPPCAEKARRLRMAQCKAGWHLDDEPLPDPDPPSDDA
HCCCCCCCCEEEEECCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH
KVLAGFRADLEVARRDAERDSDPAGVAEIDTLIDQVDDELNALGVRGKAAPDNRDRPRRA
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
RSTRRRQDAADLPRLPVEKRTVGRTYEAADGTTWRPSMFLTLTCDTYGRVTSDGTPVDPG
HHHHHHHHHHCCCCCCCCHHHCCCCEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCC
SYDYRRAARDAIHFPKLIDRFWQNLRRAVGWDVQYFAALEPQRRLAPHLHAAVRGTVPRA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LLRQVAAATYHQVWWPPCDQAVYPDTALPTWANDTSGYVDPVSGRSLPTWDAALDAVGDE
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCC
DEPSHVVRFGPQLQADGFTANSAHTGRMIGYLCKYLTKSLDACHAATTDRQRRHVDRLAE
CCCCHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALRYEPCAPTCANWLRYGIQPKNPKPGLVPGRCRGKAHRRETLGFGGRRVLVSRKWSGKT
HHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCC
LTDHKHDRVAFIRAQLEALGHTATGPAAATDTDPARTVWTLLRPGDPAAPRREYLLLQAV
CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHH
AQRHAWRAQLDAARRTAPDELPAIGPPGRAQAA
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TLPSLTGPDPAVPHDPTIRDDRDDRPGSRMARMRMPLARAVVEAVAVENGVCVRPMAMR
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHH
RTNLDTGETEIIPVPCGATLASKCPPCAEKARRLRMAQCKAGWHLDDEPLPDPDPPSDDA
HCCCCCCCCEEEEECCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH
KVLAGFRADLEVARRDAERDSDPAGVAEIDTLIDQVDDELNALGVRGKAAPDNRDRPRRA
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
RSTRRRQDAADLPRLPVEKRTVGRTYEAADGTTWRPSMFLTLTCDTYGRVTSDGTPVDPG
HHHHHHHHHHCCCCCCCCHHHCCCCEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCC
SYDYRRAARDAIHFPKLIDRFWQNLRRAVGWDVQYFAALEPQRRLAPHLHAAVRGTVPRA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LLRQVAAATYHQVWWPPCDQAVYPDTALPTWANDTSGYVDPVSGRSLPTWDAALDAVGDE
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCC
DEPSHVVRFGPQLQADGFTANSAHTGRMIGYLCKYLTKSLDACHAATTDRQRRHVDRLAE
CCCCHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALRYEPCAPTCANWLRYGIQPKNPKPGLVPGRCRGKAHRRETLGFGGRRVLVSRKWSGKT
HHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCC
LTDHKHDRVAFIRAQLEALGHTATGPAAATDTDPARTVWTLLRPGDPAAPRREYLLLQAV
CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHH
AQRHAWRAQLDAARRTAPDELPAIGPPGRAQAA
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA