| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317291
Identifier: 158317291
GI number: 158317291
Start: 6707141
End: 6708862
Strand: Reverse
Name: 158317291
Synonym: Franean1_5539
Alternate gene names: NA
Gene position: 6708862-6707141 (Counterclockwise)
Preceding gene: 158317292
Following gene: 158317290
Centisome position: 74.69
GC content: 71.84
Gene sequence:
>1722_bases GTGACCCTCCCCTCCCTCACCGGCCCTGACCCGGCCGTCCCCCACGACCCCACCATCCGTGACGATCGTGACGATCGGCC CGGCTCGCGGATGGCACGGATGCGAATGCCGCTCGCCCGTGCCGTCGTCGAAGCGGTCGCCGTGGAGAACGGGGTGTGCG TTCGACCCATGGCCATGCGCCGCACGAACCTCGACACCGGCGAAACCGAGATCATCCCCGTGCCCTGCGGCGCGACCCTC GCCAGCAAGTGCCCGCCGTGCGCGGAGAAGGCCCGGCGGCTGCGGATGGCGCAGTGCAAAGCGGGCTGGCATCTCGATGA CGAACCCCTTCCCGACCCAGACCCGCCGTCCGATGACGCCAAGGTCCTCGCCGGGTTCCGCGCGGACCTGGAAGTCGCCC GGCGCGACGCGGAACGGGACAGTGACCCGGCCGGCGTCGCCGAGATCGACACGCTTATCGACCAGGTGGACGACGAACTC AACGCCCTGGGCGTCCGCGGCAAAGCCGCTCCCGACAACCGGGACCGGCCACGTCGTGCCCGCTCGACCCGCCGGCGGCA GGACGCTGCCGATCTGCCGCGGCTGCCCGTGGAAAAGCGCACCGTCGGTCGGACGTACGAAGCGGCGGACGGCACGACCT GGCGGCCGTCGATGTTCCTGACCCTCACCTGCGACACGTACGGCCGGGTGACCTCCGACGGCACTCCCGTCGATCCGGGC TCGTACGACTACCGGCGGGCGGCCCGCGACGCGATCCACTTCCCGAAGCTGATCGACCGGTTCTGGCAGAACCTGCGTAG GGCCGTGGGCTGGGATGTGCAGTACTTCGCCGCGCTCGAACCCCAACGGCGGCTCGCCCCGCACCTGCACGCGGCCGTCC GCGGAACCGTGCCGCGGGCCCTGCTTCGGCAGGTGGCGGCAGCGACGTATCACCAGGTGTGGTGGCCACCCTGCGACCAG GCGGTCTACCCGGACACGGCCCTCCCGACCTGGGCGAACGACACGAGTGGGTACGTCGATCCGGTTTCCGGCCGGTCGCT GCCGACCTGGGACGCGGCCCTTGACGCCGTCGGAGACGAGGACGAACCGTCCCACGTGGTGCGCTTCGGCCCTCAACTGC AAGCGGACGGCTTCACCGCGAACTCGGCGCACACCGGCCGCATGATCGGCTACCTGTGCAAGTACCTGACCAAGAGCCTC GACGCCTGCCACGCGGCCACCACCGACCGGCAACGGCGGCACGTCGACCGGCTCGCCGAAGCCCTGCGCTACGAACCTTG CGCCCCCACCTGCGCCAACTGGCTCCGCTACGGGATCCAGCCGAAGAACCCGAAACCGGGTCTCGTCCCGGGCCGCTGCC GCGGCAAGGCGCACCGGCGGGAGACCCTCGGCTTCGGCGGACGGCGGGTGCTGGTCAGTCGCAAGTGGTCCGGCAAGACA CTGACCGACCACAAGCATGATCGCGTCGCGTTCATCCGGGCACAGCTCGAAGCCCTCGGCCACACCGCCACCGGCCCGGC CGCGGCGACCGACACCGACCCGGCGCGCACCGTCTGGACGCTGCTCCGGCCCGGCGACCCGGCCGCACCGCGGCGTGAAT ACCTGCTGTTGCAGGCGGTCGCGCAACGCCACGCCTGGCGCGCACAGCTCGACGCGGCCCGGCGCACCGCACCCGACGAA CTTCCGGCAATCGGCCCACCGGGCAGGGCACAAGCCGCCTGA
Upstream 100 bases:
>100_bases GTGGCACCACCGACACCGGTCCTCGCTGCGGCTGCACCAGGTTCACCGAACCGGCCACCCTCGACCGCCCGGATCTCGAC GTCTCGGAGGACCAGCCCGC
Downstream 100 bases:
>100_bases CCGTCCGCCCTGACCCGTGGAGAGAACCGTGACCAAGCTTCTCCTGACTCCGGCGGAGGCTGCCGAGCTCCTCGGCGTCG GCCGGACCACGATCTACGAA
Product: replication initiator protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 573; Mature: 572
Protein sequence:
>573_residues MTLPSLTGPDPAVPHDPTIRDDRDDRPGSRMARMRMPLARAVVEAVAVENGVCVRPMAMRRTNLDTGETEIIPVPCGATL ASKCPPCAEKARRLRMAQCKAGWHLDDEPLPDPDPPSDDAKVLAGFRADLEVARRDAERDSDPAGVAEIDTLIDQVDDEL NALGVRGKAAPDNRDRPRRARSTRRRQDAADLPRLPVEKRTVGRTYEAADGTTWRPSMFLTLTCDTYGRVTSDGTPVDPG SYDYRRAARDAIHFPKLIDRFWQNLRRAVGWDVQYFAALEPQRRLAPHLHAAVRGTVPRALLRQVAAATYHQVWWPPCDQ AVYPDTALPTWANDTSGYVDPVSGRSLPTWDAALDAVGDEDEPSHVVRFGPQLQADGFTANSAHTGRMIGYLCKYLTKSL DACHAATTDRQRRHVDRLAEALRYEPCAPTCANWLRYGIQPKNPKPGLVPGRCRGKAHRRETLGFGGRRVLVSRKWSGKT LTDHKHDRVAFIRAQLEALGHTATGPAAATDTDPARTVWTLLRPGDPAAPRREYLLLQAVAQRHAWRAQLDAARRTAPDE LPAIGPPGRAQAA
Sequences:
>Translated_573_residues MTLPSLTGPDPAVPHDPTIRDDRDDRPGSRMARMRMPLARAVVEAVAVENGVCVRPMAMRRTNLDTGETEIIPVPCGATL ASKCPPCAEKARRLRMAQCKAGWHLDDEPLPDPDPPSDDAKVLAGFRADLEVARRDAERDSDPAGVAEIDTLIDQVDDEL NALGVRGKAAPDNRDRPRRARSTRRRQDAADLPRLPVEKRTVGRTYEAADGTTWRPSMFLTLTCDTYGRVTSDGTPVDPG SYDYRRAARDAIHFPKLIDRFWQNLRRAVGWDVQYFAALEPQRRLAPHLHAAVRGTVPRALLRQVAAATYHQVWWPPCDQ AVYPDTALPTWANDTSGYVDPVSGRSLPTWDAALDAVGDEDEPSHVVRFGPQLQADGFTANSAHTGRMIGYLCKYLTKSL DACHAATTDRQRRHVDRLAEALRYEPCAPTCANWLRYGIQPKNPKPGLVPGRCRGKAHRRETLGFGGRRVLVSRKWSGKT LTDHKHDRVAFIRAQLEALGHTATGPAAATDTDPARTVWTLLRPGDPAAPRREYLLLQAVAQRHAWRAQLDAARRTAPDE LPAIGPPGRAQAA >Mature_572_residues TLPSLTGPDPAVPHDPTIRDDRDDRPGSRMARMRMPLARAVVEAVAVENGVCVRPMAMRRTNLDTGETEIIPVPCGATLA SKCPPCAEKARRLRMAQCKAGWHLDDEPLPDPDPPSDDAKVLAGFRADLEVARRDAERDSDPAGVAEIDTLIDQVDDELN ALGVRGKAAPDNRDRPRRARSTRRRQDAADLPRLPVEKRTVGRTYEAADGTTWRPSMFLTLTCDTYGRVTSDGTPVDPGS YDYRRAARDAIHFPKLIDRFWQNLRRAVGWDVQYFAALEPQRRLAPHLHAAVRGTVPRALLRQVAAATYHQVWWPPCDQA VYPDTALPTWANDTSGYVDPVSGRSLPTWDAALDAVGDEDEPSHVVRFGPQLQADGFTANSAHTGRMIGYLCKYLTKSLD ACHAATTDRQRRHVDRLAEALRYEPCAPTCANWLRYGIQPKNPKPGLVPGRCRGKAHRRETLGFGGRRVLVSRKWSGKTL TDHKHDRVAFIRAQLEALGHTATGPAAATDTDPARTVWTLLRPGDPAAPRREYLLLQAVAQRHAWRAQLDAARRTAPDEL PAIGPPGRAQAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63336; Mature: 63205
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLPSLTGPDPAVPHDPTIRDDRDDRPGSRMARMRMPLARAVVEAVAVENGVCVRPMAMR CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHH RTNLDTGETEIIPVPCGATLASKCPPCAEKARRLRMAQCKAGWHLDDEPLPDPDPPSDDA HCCCCCCCCEEEEECCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH KVLAGFRADLEVARRDAERDSDPAGVAEIDTLIDQVDDELNALGVRGKAAPDNRDRPRRA HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH RSTRRRQDAADLPRLPVEKRTVGRTYEAADGTTWRPSMFLTLTCDTYGRVTSDGTPVDPG HHHHHHHHHHCCCCCCCCHHHCCCCEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCC SYDYRRAARDAIHFPKLIDRFWQNLRRAVGWDVQYFAALEPQRRLAPHLHAAVRGTVPRA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHH LLRQVAAATYHQVWWPPCDQAVYPDTALPTWANDTSGYVDPVSGRSLPTWDAALDAVGDE HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCC DEPSHVVRFGPQLQADGFTANSAHTGRMIGYLCKYLTKSLDACHAATTDRQRRHVDRLAE CCCCHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALRYEPCAPTCANWLRYGIQPKNPKPGLVPGRCRGKAHRRETLGFGGRRVLVSRKWSGKT HHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCC LTDHKHDRVAFIRAQLEALGHTATGPAAATDTDPARTVWTLLRPGDPAAPRREYLLLQAV CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHH AQRHAWRAQLDAARRTAPDELPAIGPPGRAQAA HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TLPSLTGPDPAVPHDPTIRDDRDDRPGSRMARMRMPLARAVVEAVAVENGVCVRPMAMR CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHH RTNLDTGETEIIPVPCGATLASKCPPCAEKARRLRMAQCKAGWHLDDEPLPDPDPPSDDA HCCCCCCCCEEEEECCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH KVLAGFRADLEVARRDAERDSDPAGVAEIDTLIDQVDDELNALGVRGKAAPDNRDRPRRA HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH RSTRRRQDAADLPRLPVEKRTVGRTYEAADGTTWRPSMFLTLTCDTYGRVTSDGTPVDPG HHHHHHHHHHCCCCCCCCHHHCCCCEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCC SYDYRRAARDAIHFPKLIDRFWQNLRRAVGWDVQYFAALEPQRRLAPHLHAAVRGTVPRA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHH LLRQVAAATYHQVWWPPCDQAVYPDTALPTWANDTSGYVDPVSGRSLPTWDAALDAVGDE HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCC DEPSHVVRFGPQLQADGFTANSAHTGRMIGYLCKYLTKSLDACHAATTDRQRRHVDRLAE CCCCHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALRYEPCAPTCANWLRYGIQPKNPKPGLVPGRCRGKAHRRETLGFGGRRVLVSRKWSGKT HHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCC LTDHKHDRVAFIRAQLEALGHTATGPAAATDTDPARTVWTLLRPGDPAAPRREYLLLQAV CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHH AQRHAWRAQLDAARRTAPDELPAIGPPGRAQAA HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA