| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317114
Identifier: 158317114
GI number: 158317114
Start: 6463086
End: 6463691
Strand: Reverse
Name: 158317114
Synonym: Franean1_5358
Alternate gene names: NA
Gene position: 6463691-6463086 (Counterclockwise)
Preceding gene: 158317117
Following gene: 158317113
Centisome position: 71.96
GC content: 69.47
Gene sequence:
>606_bases GTGCGGGCCGCGGCAGCGCAGGCCCGGGCGACAGCTGGGCTACCGCCGGTCGTCGGCTGTTGGGTCAGTGTTGGCTGGAG CCGGGGTGTGGCGGTCGACCCGTCCCGTGGCTGGGCCGCCGAGGCACTCTCCCCCGAGGACGATGAGGAGAGCACCGGCG GCCTGGTGAGCGTGCTGGTGGCCCGCAAGCATCGCTGGGACAGGGCGTCGGTGTGCGGGTACCTGGTGGACGTTTATTGC CTGGGCGTGAAGAACGCCTTCGGCCCTGACATCAAGACCGACGTCGAACTGTCCCAGTTCCTGCCCGAGTACTACGCTGC CTACCCCGCTGGATGGCAGGAGGTGCCGATCGACCTCGCCGCGGACATCGTCTTCGGTGCGGTGGGATACGCCCGGGGCC TCGGTTTCGAACCCCACGCCGACTTCGCCCAGGCCGCCGGCCAGCTCGGCGCATGGGAAGGGCCCCCAGCCATCACCTTC GGCCGAGGCGGCAAGCCGTTCTACCAGTCGGGCCCATATGACAACCCCCGGAAGGTCATCGAAACCCTGGAACGCACGGT CGGCCCGCCACCCGCCTTCGACTACCTCGTCGTCGGCAGAGCGTGA
Upstream 100 bases:
>100_bases AGAGCTACGTGATCAGGTGTCCCAGCTACGCGGCGAGGGGAAGTCGCCGAAGCAGATAGCTCGTGCCTTGGGCGTTGCGC CCTCGCGGGTCGCCCCTCTC
Downstream 100 bases:
>100_bases CAACCACCTCGCCCGTCCGTACGCCGACACGCGCTCGTCTGCCGCATGCCGGTCGTTCACCGTCGCCGGAAACCTATGGG TCATAGGCGGGGAGTGGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MRAAAAQARATAGLPPVVGCWVSVGWSRGVAVDPSRGWAAEALSPEDDEESTGGLVSVLVARKHRWDRASVCGYLVDVYC LGVKNAFGPDIKTDVELSQFLPEYYAAYPAGWQEVPIDLAADIVFGAVGYARGLGFEPHADFAQAAGQLGAWEGPPAITF GRGGKPFYQSGPYDNPRKVIETLERTVGPPPAFDYLVVGRA
Sequences:
>Translated_201_residues MRAAAAQARATAGLPPVVGCWVSVGWSRGVAVDPSRGWAAEALSPEDDEESTGGLVSVLVARKHRWDRASVCGYLVDVYC LGVKNAFGPDIKTDVELSQFLPEYYAAYPAGWQEVPIDLAADIVFGAVGYARGLGFEPHADFAQAAGQLGAWEGPPAITF GRGGKPFYQSGPYDNPRKVIETLERTVGPPPAFDYLVVGRA >Mature_201_residues MRAAAAQARATAGLPPVVGCWVSVGWSRGVAVDPSRGWAAEALSPEDDEESTGGLVSVLVARKHRWDRASVCGYLVDVYC LGVKNAFGPDIKTDVELSQFLPEYYAAYPAGWQEVPIDLAADIVFGAVGYARGLGFEPHADFAQAAGQLGAWEGPPAITF GRGGKPFYQSGPYDNPRKVIETLERTVGPPPAFDYLVVGRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21400; Mature: 21400
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAAAAQARATAGLPPVVGCWVSVGWSRGVAVDPSRGWAAEALSPEDDEESTGGLVSVLV CCCCHHHHHHHCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHH ARKHRWDRASVCGYLVDVYCLGVKNAFGPDIKTDVELSQFLPEYYAAYPAGWQEVPIDLA HHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHH ADIVFGAVGYARGLGFEPHADFAQAAGQLGAWEGPPAITFGRGGKPFYQSGPYDNPRKVI HHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHH ETLERTVGPPPAFDYLVVGRA HHHHHHCCCCCCCCEEEECCC >Mature Secondary Structure MRAAAAQARATAGLPPVVGCWVSVGWSRGVAVDPSRGWAAEALSPEDDEESTGGLVSVLV CCCCHHHHHHHCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHH ARKHRWDRASVCGYLVDVYCLGVKNAFGPDIKTDVELSQFLPEYYAAYPAGWQEVPIDLA HHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHH ADIVFGAVGYARGLGFEPHADFAQAAGQLGAWEGPPAITFGRGGKPFYQSGPYDNPRKVI HHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHH ETLERTVGPPPAFDYLVVGRA HHHHHHCCCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA