| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is marR [C]
Identifier: 158317117
GI number: 158317117
Start: 6465464
End: 6466015
Strand: Reverse
Name: marR [C]
Synonym: Franean1_5361
Alternate gene names: 158317117
Gene position: 6466015-6465464 (Counterclockwise)
Preceding gene: 158317121
Following gene: 158317114
Centisome position: 71.99
GC content: 67.57
Gene sequence:
>552_bases ATGCCACGGGAATCTGTTTCGGTGGAGGGGAGAGCGGAGGGGAGAGATGAAGCGGTACCGACCGTCGCCGACGCTCCGAT GAGCGAGGCTCTCTTCCGTGCTGCCCGTGTGCACCGGATCATGGCCGGCACTCTGCTGCGCGACACCGGCCTGTATCCGG GCCAGGAACTGCTGATGATGCAGCTGTGGGAACGCGGCGAGCAGCGCCAAGCGGATCTGATCAAAACGCTCGGCCTGGAT CCGTCGACCGTCACCAAGATGCTGCAGCGCCTGGAGCAGTCCGGCTTCGTCACCCGCAAACCGTCCCCCCATGACCGCCG GGCCGTCGTGGTGAGCGCCACCCGCGCGGGCCAGGCCCTGCGTGGCCAGGTCAGGCAGGCATGGAGCGAGCTGGAACAGG TCACCGCAGCCGGCTTCACCGAAGCGGAGTACCGCCAGGCCATGCGCGTACTGACCCGGATCGAAACAAACCTCACGACC CCACCGCCCGCCAACGACCCGCCGACACCGCCAACCGCCCCTCCACGACCTGACGCCAAATCGGCGACCTGA
Upstream 100 bases:
>100_bases CGCTCAAGCCAAGAGTATTCCATTAGCCGACCAATGAGTGAGATGATTTCCTGGCCGGACCGCCAGGGACGTGACCTGTC CGTGAGGAGGATCGACAGCC
Downstream 100 bases:
>100_bases GAAGCCGTTGTCTTACCCGGATCCGAGCGGCGAGTTTTTGCAGGAAGCCGGGCAGCGGGCCATGGCCGCGGCGTTGTAGC GCCAGCGGTCGAGGAAGGGC
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: MarR Family Transcriptional Regulator; Transcriptional Regulator MarR Family; Transcriptional Regulator-Like Protein; Transcriptional Regulator TrmB; MarR-Family Transcriptional Regulator
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MPRESVSVEGRAEGRDEAVPTVADAPMSEALFRAARVHRIMAGTLLRDTGLYPGQELLMMQLWERGEQRQADLIKTLGLD PSTVTKMLQRLEQSGFVTRKPSPHDRRAVVVSATRAGQALRGQVRQAWSELEQVTAAGFTEAEYRQAMRVLTRIETNLTT PPPANDPPTPPTAPPRPDAKSAT
Sequences:
>Translated_183_residues MPRESVSVEGRAEGRDEAVPTVADAPMSEALFRAARVHRIMAGTLLRDTGLYPGQELLMMQLWERGEQRQADLIKTLGLD PSTVTKMLQRLEQSGFVTRKPSPHDRRAVVVSATRAGQALRGQVRQAWSELEQVTAAGFTEAEYRQAMRVLTRIETNLTT PPPANDPPTPPTAPPRPDAKSAT >Mature_182_residues PRESVSVEGRAEGRDEAVPTVADAPMSEALFRAARVHRIMAGTLLRDTGLYPGQELLMMQLWERGEQRQADLIKTLGLDP STVTKMLQRLEQSGFVTRKPSPHDRRAVVVSATRAGQALRGQVRQAWSELEQVTAAGFTEAEYRQAMRVLTRIETNLTTP PPANDPPTPPTAPPRPDAKSAT
Specific function: Repressor Of The Marrab Operon Which Is Involved In The Activation Of Both Antibiotic Resistance And Oxidative Stress Genes. Binds To The Maro Operator/Promoter Site. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20137; Mature: 20006
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRESVSVEGRAEGRDEAVPTVADAPMSEALFRAARVHRIMAGTLLRDTGLYPGQELLMM CCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH QLWERGEQRQADLIKTLGLDPSTVTKMLQRLEQSGFVTRKPSPHDRRAVVVSATRAGQAL HHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECHHHHHHH RGQVRQAWSELEQVTAAGFTEAEYRQAMRVLTRIETNLTTPPPANDPPTPPTAPPRPDAK HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC SAT CCC >Mature Secondary Structure PRESVSVEGRAEGRDEAVPTVADAPMSEALFRAARVHRIMAGTLLRDTGLYPGQELLMM CCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH QLWERGEQRQADLIKTLGLDPSTVTKMLQRLEQSGFVTRKPSPHDRRAVVVSATRAGQAL HHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECHHHHHHH RGQVRQAWSELEQVTAAGFTEAEYRQAMRVLTRIETNLTTPPPANDPPTPPTAPPRPDAK HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC SAT CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA