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The map label for this gene is 158317071

Identifier: 158317071

GI number: 158317071

Start: 6400668

End: 6402920

Strand: Reverse

Name: 158317071

Synonym: Franean1_5315

Alternate gene names: NA

Gene position: 6402920-6400668 (Counterclockwise)

Preceding gene: 158317074

Following gene: 158317068

Centisome position: 71.29

GC content: 74.61

Gene sequence:

>2253_bases
GTGGCTAAACGTCCCCTCGGCGCCGCGGCCGATCCGGTCGAGGCGTCCGGACCGGCGCCGGCCGGGCGGGCGACGTCCGG
GCGGGCGACGCACGGATGGGAGAGTCGAGGCCCGGTGATCGACACGGAGTCCCGCTCGGTGGGCTGGGCCGCCACGACGG
CCATGGTTGGCCGCGCCATCGTCCGCGAGCTGTCGAGTACCCGGCGCCGGCGCCGCGTGCACGTCACCGAGGAGGCGACG
TTCGAGCAGCTGTCGTTCCTCGCCGACGCGAGCCTGGTCCTGAGCAGCTCGCTCGACCCGCAGCGGATCATCGACATGAT
CGCATCCCTGGTTGTGCCCCGGATGGGCGACGCGGCCGTGGTCTGGCTTCGCGGCGACGGGGACAGCATTCGGATCGCCG
GGTCGCGCTTTCTCGACCCGAAGACGGCGGACTTCGTCCGGGCCGTCGTCCAGATCCACCCGCCGACAGCCACCGAGGAC
ATCCCGCCGGGCGTCGTCGTCCGGACCGGCCAGTCGTACTACGTGCCCCGCTACACCGAGGACGTCGTCCGCCGACTGTT
CCCCGGCGAGGCCGTTGAGCGGTTCGGGGAGATCCAGGCAGGCGCCGCGATCACCGTGCCGATGTACGCCCGGGGGAGGG
TGTTCGGCGCGCTGACGGTCGGCCGGCGCGAATCCGTCGAGTACACCGCGCTCGACATCCGCCTCATCGAGGAGCTGGCC
CGGCGCGGCGGCACCGCGCTCGACAACGCGCAGCTCTTCCGGGACGTCGAGGAGTCCGCGCTGACACTGCAGCGCTCGAT
GCTTCCCGCGCACCCGCCGGCCCTGGACGGCATGGAGATCGCGATGGAGTACCGGCCCGGCACGGCCGGTACGGAGGTCG
GCGGGGACCTCTACGACGTCATCCCGCTGCCCGGCGGGCGGGTCGGCGTGGCGATCGGTGACGTGATGGGCCGTGGCCTG
CACGCGGCCGCGGTGATGGGCCAGCTGCGGGCCGCACTGCGGGCGTACGCGCTGGAGGACTGGGGACCCGCCGAGCTGCT
GGCCCGGCTCGACCGGGTTGTCGACTCGCTGCCCGGCCTGCAGATGGCCACCTCCATGTACGCGGTGTACGACCCCTACT
CCGGCCGGATGACGATCGCGAGCGCGGGCCATCCGCCGCCGCTGTTGCTGCTGCCCGACGAGGAGCCGGACTACCTCGTT
CTCGAGCCCGGGCTCCCGCTCGGGACGGGTGAGCAGGGCACCTTCTCCGAGCTGACCGTCTCGCTCCCGTCCGGCTCGGC
GTTCGTGATGTTCACCGACGGCCTGGTGGAATCCCGGCGCCGGCCGCTCGCGGACGGCCTGGAGCACCTGAGGTCGGGCC
TGGGCGAGCAGATCGCCCGTCCGCGCGCCGTTCGGGCGTTCGCGCCGCCTTCGGGTGATCCGTCTGTGGGCGCGGCGCCT
GCCACGGGTGATCCGCCCGTGGGCGCGGCGCCTGCCACAGGTGATCCGCCCGTGGGCGCGGCGCCCGCCGCGGGTGATCC
GCCCGCGGCCGTCGTGGCACTGGCGGCCTCCGCGCCGGCCGCCGCGGCTGGCGGAGCCATGGTCACGCCGGAGCGGCGGA
TCAGAGAGCGGCGGTCGGGCCGGGACCGCCGCGGGGGCTACCGCAGGACGCGGGCGAGCGGTGACCGCCGCCGCACCGGC
GGTGGCTTCGCGGCCCGCAGCTGGTCCGGCCCGGACGCGGTGAGCGGCAGCGGATCGGGCCCGAGCGAGGAGACCGCCCG
GACCCTGCTCGAGCGCTGCCTGCTGGCCGCGGATCTCCCGCCGCGCACGGACGACGACATAGCGCTGCTCGCGCTGGTCA
CCCGGCAGCTGCGCCCGCCGCTGCTCCAGCTCGCGCTGCCCGCCGTCGCCGCATCGGCCGGACAGGCCCGCACGGCCGTC
CGGCGCTCGCTGCTCGACGCCGGGATCGGATCACTCGACGACGCGATTCTGCTGGTCAGCGAGGTGGTCACCAACGCGGT
GCTGCACGCGCGCAGCGATCTCGTGCTGCGGGCCACCCTGGAACCCGGGCGGCTGCGGGTGAGCGTCGAGGACAGGGAGG
GCACCGCCCTGCCCCGGCCCGGCGGCAACTCCCCGGACGATCCGGAGGCCGAGCACGGCTGGGGCCTGCTCCTCGTCGAG
GCGCTCGCGCAGGCCTGGGGAGTCGAGACGACACCGGACGGCAAGCGGGTCTGGTTCGAGATGGAGATCCCCGACGAGGC
CGACCACACCTGA

Upstream 100 bases:

>100_bases
CGGCTCGGCGGGCGCGATGTCCGACTCTCGAACTACACTTCCGCGAGTGGATGACGTCACTGTCCGTTATGGTGTGCTTC
CTGGGGGTGGATGTGTCCCG

Downstream 100 bases:

>100_bases
GACCACACCTAAGGACGAGGCGGTGTGCCGGCCGGTGGCCGGTCACCGGCCGGCCGGCGTGGTCGGCTCGATCGAAGTCG
ACTCCGTCGGGGCCGCCACA

Product: GAF sensor-containing protein serine phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 750; Mature: 749

Protein sequence:

>750_residues
MAKRPLGAAADPVEASGPAPAGRATSGRATHGWESRGPVIDTESRSVGWAATTAMVGRAIVRELSSTRRRRRVHVTEEAT
FEQLSFLADASLVLSSSLDPQRIIDMIASLVVPRMGDAAVVWLRGDGDSIRIAGSRFLDPKTADFVRAVVQIHPPTATED
IPPGVVVRTGQSYYVPRYTEDVVRRLFPGEAVERFGEIQAGAAITVPMYARGRVFGALTVGRRESVEYTALDIRLIEELA
RRGGTALDNAQLFRDVEESALTLQRSMLPAHPPALDGMEIAMEYRPGTAGTEVGGDLYDVIPLPGGRVGVAIGDVMGRGL
HAAAVMGQLRAALRAYALEDWGPAELLARLDRVVDSLPGLQMATSMYAVYDPYSGRMTIASAGHPPPLLLLPDEEPDYLV
LEPGLPLGTGEQGTFSELTVSLPSGSAFVMFTDGLVESRRRPLADGLEHLRSGLGEQIARPRAVRAFAPPSGDPSVGAAP
ATGDPPVGAAPATGDPPVGAAPAAGDPPAAVVALAASAPAAAAGGAMVTPERRIRERRSGRDRRGGYRRTRASGDRRRTG
GGFAARSWSGPDAVSGSGSGPSEETARTLLERCLLAADLPPRTDDDIALLALVTRQLRPPLLQLALPAVAASAGQARTAV
RRSLLDAGIGSLDDAILLVSEVVTNAVLHARSDLVLRATLEPGRLRVSVEDREGTALPRPGGNSPDDPEAEHGWGLLLVE
ALAQAWGVETTPDGKRVWFEMEIPDEADHT

Sequences:

>Translated_750_residues
MAKRPLGAAADPVEASGPAPAGRATSGRATHGWESRGPVIDTESRSVGWAATTAMVGRAIVRELSSTRRRRRVHVTEEAT
FEQLSFLADASLVLSSSLDPQRIIDMIASLVVPRMGDAAVVWLRGDGDSIRIAGSRFLDPKTADFVRAVVQIHPPTATED
IPPGVVVRTGQSYYVPRYTEDVVRRLFPGEAVERFGEIQAGAAITVPMYARGRVFGALTVGRRESVEYTALDIRLIEELA
RRGGTALDNAQLFRDVEESALTLQRSMLPAHPPALDGMEIAMEYRPGTAGTEVGGDLYDVIPLPGGRVGVAIGDVMGRGL
HAAAVMGQLRAALRAYALEDWGPAELLARLDRVVDSLPGLQMATSMYAVYDPYSGRMTIASAGHPPPLLLLPDEEPDYLV
LEPGLPLGTGEQGTFSELTVSLPSGSAFVMFTDGLVESRRRPLADGLEHLRSGLGEQIARPRAVRAFAPPSGDPSVGAAP
ATGDPPVGAAPATGDPPVGAAPAAGDPPAAVVALAASAPAAAAGGAMVTPERRIRERRSGRDRRGGYRRTRASGDRRRTG
GGFAARSWSGPDAVSGSGSGPSEETARTLLERCLLAADLPPRTDDDIALLALVTRQLRPPLLQLALPAVAASAGQARTAV
RRSLLDAGIGSLDDAILLVSEVVTNAVLHARSDLVLRATLEPGRLRVSVEDREGTALPRPGGNSPDDPEAEHGWGLLLVE
ALAQAWGVETTPDGKRVWFEMEIPDEADHT
>Mature_749_residues
AKRPLGAAADPVEASGPAPAGRATSGRATHGWESRGPVIDTESRSVGWAATTAMVGRAIVRELSSTRRRRRVHVTEEATF
EQLSFLADASLVLSSSLDPQRIIDMIASLVVPRMGDAAVVWLRGDGDSIRIAGSRFLDPKTADFVRAVVQIHPPTATEDI
PPGVVVRTGQSYYVPRYTEDVVRRLFPGEAVERFGEIQAGAAITVPMYARGRVFGALTVGRRESVEYTALDIRLIEELAR
RGGTALDNAQLFRDVEESALTLQRSMLPAHPPALDGMEIAMEYRPGTAGTEVGGDLYDVIPLPGGRVGVAIGDVMGRGLH
AAAVMGQLRAALRAYALEDWGPAELLARLDRVVDSLPGLQMATSMYAVYDPYSGRMTIASAGHPPPLLLLPDEEPDYLVL
EPGLPLGTGEQGTFSELTVSLPSGSAFVMFTDGLVESRRRPLADGLEHLRSGLGEQIARPRAVRAFAPPSGDPSVGAAPA
TGDPPVGAAPATGDPPVGAAPAAGDPPAAVVALAASAPAAAAGGAMVTPERRIRERRSGRDRRGGYRRTRASGDRRRTGG
GFAARSWSGPDAVSGSGSGPSEETARTLLERCLLAADLPPRTDDDIALLALVTRQLRPPLLQLALPAVAASAGQARTAVR
RSLLDAGIGSLDDAILLVSEVVTNAVLHARSDLVLRATLEPGRLRVSVEDREGTALPRPGGNSPDDPEAEHGWGLLLVEA
LAQAWGVETTPDGKRVWFEMEIPDEADHT

Specific function: Unknown

COG id: COG2208

COG function: function code TK; Serine phosphatase RsbU, regulator of sigma subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013656
- InterPro:   IPR001932
- InterPro:   IPR002645
- InterPro:   IPR010822 [H]

Pfam domain/function: PF02518 HATPase_c; PF08448 PAS_4; PF07228 SpoIIE; PF01740 STAS [H]

EC number: NA

Molecular weight: Translated: 79126; Mature: 78995

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKRPLGAAADPVEASGPAPAGRATSGRATHGWESRGPVIDTESRSVGWAATTAMVGRAI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHH
VRELSSTRRRRRVHVTEEATFEQLSFLADASLVLSSSLDPQRIIDMIASLVVPRMGDAAV
HHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEE
VWLRGDGDSIRIAGSRFLDPKTADFVRAVVQIHPPTATEDIPPGVVVRTGQSYYVPRYTE
EEEECCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCEECCCHHH
DVVRRLFPGEAVERFGEIQAGAAITVPMYARGRVFGALTVGRRESVEYTALDIRLIEELA
HHHHHHCCCHHHHHHHHHCCCCEEEEEEEECCEEEEEEEECCCCCCEEEHHHHHHHHHHH
RRGGTALDNAQLFRDVEESALTLQRSMLPAHPPALDGMEIAMEYRPGTAGTEVGGDLYDV
HCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEE
IPLPGGRVGVAIGDVMGRGLHAAAVMGQLRAALRAYALEDWGPAELLARLDRVVDSLPGL
ECCCCCCEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCH
QMATSMYAVYDPYSGRMTIASAGHPPPLLLLPDEEPDYLVLEPGLPLGTGEQGTFSELTV
HHHHHEEEEECCCCCCEEEEECCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCCEEE
SLPSGSAFVMFTDGLVESRRRPLADGLEHLRSGLGEQIARPRAVRAFAPPSGDPSVGAAP
ECCCCCEEEEEECCHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCC
ATGDPPVGAAPATGDPPVGAAPAAGDPPAAVVALAASAPAAAAGGAMVTPERRIRERRSG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEEECCCCCHHCCCCCCCCHHHHHHHHCC
RDRRGGYRRTRASGDRRRTGGGFAARSWSGPDAVSGSGSGPSEETARTLLERCLLAADLP
CCCCCCCHHHCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
PRTDDDIALLALVTRQLRPPLLQLALPAVAASAGQARTAVRRSLLDAGIGSLDDAILLVS
CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
EVVTNAVLHARSDLVLRATLEPGRLRVSVEDREGTALPRPGGNSPDDPEAEHGWGLLLVE
HHHHHHHHHCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
ALAQAWGVETTPDGKRVWFEMEIPDEADHT
HHHHHCCCCCCCCCCEEEEEEECCCCCCCC
>Mature Secondary Structure 
AKRPLGAAADPVEASGPAPAGRATSGRATHGWESRGPVIDTESRSVGWAATTAMVGRAI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHH
VRELSSTRRRRRVHVTEEATFEQLSFLADASLVLSSSLDPQRIIDMIASLVVPRMGDAAV
HHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEE
VWLRGDGDSIRIAGSRFLDPKTADFVRAVVQIHPPTATEDIPPGVVVRTGQSYYVPRYTE
EEEECCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCEECCCHHH
DVVRRLFPGEAVERFGEIQAGAAITVPMYARGRVFGALTVGRRESVEYTALDIRLIEELA
HHHHHHCCCHHHHHHHHHCCCCEEEEEEEECCEEEEEEEECCCCCCEEEHHHHHHHHHHH
RRGGTALDNAQLFRDVEESALTLQRSMLPAHPPALDGMEIAMEYRPGTAGTEVGGDLYDV
HCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEE
IPLPGGRVGVAIGDVMGRGLHAAAVMGQLRAALRAYALEDWGPAELLARLDRVVDSLPGL
ECCCCCCEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCH
QMATSMYAVYDPYSGRMTIASAGHPPPLLLLPDEEPDYLVLEPGLPLGTGEQGTFSELTV
HHHHHEEEEECCCCCCEEEEECCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCCEEE
SLPSGSAFVMFTDGLVESRRRPLADGLEHLRSGLGEQIARPRAVRAFAPPSGDPSVGAAP
ECCCCCEEEEEECCHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCC
ATGDPPVGAAPATGDPPVGAAPAAGDPPAAVVALAASAPAAAAGGAMVTPERRIRERRSG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEEECCCCCHHCCCCCCCCHHHHHHHHCC
RDRRGGYRRTRASGDRRRTGGGFAARSWSGPDAVSGSGSGPSEETARTLLERCLLAADLP
CCCCCCCHHHCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
PRTDDDIALLALVTRQLRPPLLQLALPAVAASAGQARTAVRRSLLDAGIGSLDDAILLVS
CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
EVVTNAVLHARSDLVLRATLEPGRLRVSVEDREGTALPRPGGNSPDDPEAEHGWGLLLVE
HHHHHHHHHCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
ALAQAWGVETTPDGKRVWFEMEIPDEADHT
HHHHHCCCCCCCCCCEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]