| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316990
Identifier: 158316990
GI number: 158316990
Start: 6286674
End: 6287810
Strand: Reverse
Name: 158316990
Synonym: Franean1_5234
Alternate gene names: NA
Gene position: 6287810-6286674 (Counterclockwise)
Preceding gene: 158316991
Following gene: 158316987
Centisome position: 70.0
GC content: 74.23
Gene sequence:
>1137_bases GTGTTCCGGCTCGCGGTCTGCGCCTTCGACGACCGGCCCGACCTGCCGGCCGAGACCCACACGCTGGACGCGCTGGTCTC GGCGATGAAGCGCCGCCAGTGGCTGTCCGCCGAGGAGAGCCTCGCGCTGCACGCCGTCCTGGTCGCGATCTTCCCGAACC TGGCCGGCCGGGCGGTCTTCCAGCGCGGCGTCGCCGGGACGGTGGACCGGCCGGTGCGCAAGCGGCCGCTGTGCGTGCCC GCGCTGCTCGAATGCCTGCCCACCGCCCGGACCAGGCCCGACCCGATCCTGGACGAGCTGACCGAGGCGCTCACCACCCC GGCCGGGGTGGCCACCGACCGGGCCGAGCTCCGCCGCGCTCTCGACAGCCTGGTCAGCCGAGCCTCCCGGCCGACGATGG ACCTCCCGGCAAGTCTTCAGCAGTACGAGATCCATCTGATCAACTCGGTCTACGCCGCCCAGGGTCGGATCGCGGAGCTG GCCGAGACGGCGGCCGACCCGCCCGCCGGGGTGCTGTGGGCGCTGCTGGACGCCGTCCGCGACGGAGCCTGGCGTGACGA ATCCAGCCTGGCGAGCCTGCGCGGTTCGCTGTTCTCCCAGCTGAGGATGCCGATCCCGGGGTTTGCCGTCGGCCCGCCGA TCATCGCCCCGGATGTCGACCCGACAGTCCTGGAACGGATCGCCGTGGCGGCCGGCGAGGTCCTGGCGCGGCTGCGCGCG GAGCTCGCGGACGTCTGGGACGGCGACCGGGCGCGGGCGGCCGATCTCGTCGTCGACGCACTGTCCGCGCTGTCGACGGG TGTGCTCGGCGGCGGGCCGGGCGACATACGGGTGCAGCCCGCGGTCACCAGGCTGCGCACGCTGGTCACCCGCGCGATGG CGGCCGCCGGCCCGGTCGGCGGCGGGGCCTCGGCTGGCGGGGAAATGGACGGCGGGGGAGCGGAATCCCGGGCGGACCGG TCGGCCGCCGCCCAGGAGACCATTGACGGGCTGGCCTGGCGAGTTCGGACCCAGGTGGGCACGGCCGGGCTCACCGACCT GGTGGCGGAGGCCTTCGTCGAAATCCTCGAACGGCTCGACACCTCGGTCGACATCGACAATCTCAGCGCCGCGCTGCAGC TGCGCTGGGCCCAGTAG
Upstream 100 bases:
>100_bases GGACGACGATCTGGGTGGGGACGACACCAGAGGCGCCCCGGGCCCCGGCCCACGCGAGCCCGGTCCGGCCGGTGCGGACC CGTGGTCGGCGGCCGAGGCG
Downstream 100 bases:
>100_bases CCGGCACCGCCACCTGCAAAGGCAGGCAACCATGCGGAAATTCTCCTTCGGACGGCGCAACGGCCGTGGATTCGGCCTCG ACAGCCACGACGTCGCGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 378; Mature: 378
Protein sequence:
>378_residues MFRLAVCAFDDRPDLPAETHTLDALVSAMKRRQWLSAEESLALHAVLVAIFPNLAGRAVFQRGVAGTVDRPVRKRPLCVP ALLECLPTARTRPDPILDELTEALTTPAGVATDRAELRRALDSLVSRASRPTMDLPASLQQYEIHLINSVYAAQGRIAEL AETAADPPAGVLWALLDAVRDGAWRDESSLASLRGSLFSQLRMPIPGFAVGPPIIAPDVDPTVLERIAVAAGEVLARLRA ELADVWDGDRARAADLVVDALSALSTGVLGGGPGDIRVQPAVTRLRTLVTRAMAAAGPVGGGASAGGEMDGGGAESRADR SAAAQETIDGLAWRVRTQVGTAGLTDLVAEAFVEILERLDTSVDIDNLSAALQLRWAQ
Sequences:
>Translated_378_residues MFRLAVCAFDDRPDLPAETHTLDALVSAMKRRQWLSAEESLALHAVLVAIFPNLAGRAVFQRGVAGTVDRPVRKRPLCVP ALLECLPTARTRPDPILDELTEALTTPAGVATDRAELRRALDSLVSRASRPTMDLPASLQQYEIHLINSVYAAQGRIAEL AETAADPPAGVLWALLDAVRDGAWRDESSLASLRGSLFSQLRMPIPGFAVGPPIIAPDVDPTVLERIAVAAGEVLARLRA ELADVWDGDRARAADLVVDALSALSTGVLGGGPGDIRVQPAVTRLRTLVTRAMAAAGPVGGGASAGGEMDGGGAESRADR SAAAQETIDGLAWRVRTQVGTAGLTDLVAEAFVEILERLDTSVDIDNLSAALQLRWAQ >Mature_378_residues MFRLAVCAFDDRPDLPAETHTLDALVSAMKRRQWLSAEESLALHAVLVAIFPNLAGRAVFQRGVAGTVDRPVRKRPLCVP ALLECLPTARTRPDPILDELTEALTTPAGVATDRAELRRALDSLVSRASRPTMDLPASLQQYEIHLINSVYAAQGRIAEL AETAADPPAGVLWALLDAVRDGAWRDESSLASLRGSLFSQLRMPIPGFAVGPPIIAPDVDPTVLERIAVAAGEVLARLRA ELADVWDGDRARAADLVVDALSALSTGVLGGGPGDIRVQPAVTRLRTLVTRAMAAAGPVGGGASAGGEMDGGGAESRADR SAAAQETIDGLAWRVRTQVGTAGLTDLVAEAFVEILERLDTSVDIDNLSAALQLRWAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39928; Mature: 39928
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRLAVCAFDDRPDLPAETHTLDALVSAMKRRQWLSAEESLALHAVLVAIFPNLAGRAVF CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH QRGVAGTVDRPVRKRPLCVPALLECLPTARTRPDPILDELTEALTTPAGVATDRAELRRA HHCCCCCCCCCHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHH LDSLVSRASRPTMDLPASLQQYEIHLINSVYAAQGRIAELAETAADPPAGVLWALLDAVR HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHH DGAWRDESSLASLRGSLFSQLRMPIPGFAVGPPIIAPDVDPTVLERIAVAAGEVLARLRA CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH ELADVWDGDRARAADLVVDALSALSTGVLGGGPGDIRVQPAVTRLRTLVTRAMAAAGPVG HHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHHHCCCCC GGASAGGEMDGGGAESRADRSAAAQETIDGLAWRVRTQVGTAGLTDLVAEAFVEILERLD CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC TSVDIDNLSAALQLRWAQ CCCCHHHHHHHHHEEECC >Mature Secondary Structure MFRLAVCAFDDRPDLPAETHTLDALVSAMKRRQWLSAEESLALHAVLVAIFPNLAGRAVF CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH QRGVAGTVDRPVRKRPLCVPALLECLPTARTRPDPILDELTEALTTPAGVATDRAELRRA HHCCCCCCCCCHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHH LDSLVSRASRPTMDLPASLQQYEIHLINSVYAAQGRIAELAETAADPPAGVLWALLDAVR HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHH DGAWRDESSLASLRGSLFSQLRMPIPGFAVGPPIIAPDVDPTVLERIAVAAGEVLARLRA CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH ELADVWDGDRARAADLVVDALSALSTGVLGGGPGDIRVQPAVTRLRTLVTRAMAAAGPVG HHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHHHCCCCC GGASAGGEMDGGGAESRADRSAAAQETIDGLAWRVRTQVGTAGLTDLVAEAFVEILERLD CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC TSVDIDNLSAALQLRWAQ CCCCHHHHHHHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA