Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158316990

Identifier: 158316990

GI number: 158316990

Start: 6286674

End: 6287810

Strand: Reverse

Name: 158316990

Synonym: Franean1_5234

Alternate gene names: NA

Gene position: 6287810-6286674 (Counterclockwise)

Preceding gene: 158316991

Following gene: 158316987

Centisome position: 70.0

GC content: 74.23

Gene sequence:

>1137_bases
GTGTTCCGGCTCGCGGTCTGCGCCTTCGACGACCGGCCCGACCTGCCGGCCGAGACCCACACGCTGGACGCGCTGGTCTC
GGCGATGAAGCGCCGCCAGTGGCTGTCCGCCGAGGAGAGCCTCGCGCTGCACGCCGTCCTGGTCGCGATCTTCCCGAACC
TGGCCGGCCGGGCGGTCTTCCAGCGCGGCGTCGCCGGGACGGTGGACCGGCCGGTGCGCAAGCGGCCGCTGTGCGTGCCC
GCGCTGCTCGAATGCCTGCCCACCGCCCGGACCAGGCCCGACCCGATCCTGGACGAGCTGACCGAGGCGCTCACCACCCC
GGCCGGGGTGGCCACCGACCGGGCCGAGCTCCGCCGCGCTCTCGACAGCCTGGTCAGCCGAGCCTCCCGGCCGACGATGG
ACCTCCCGGCAAGTCTTCAGCAGTACGAGATCCATCTGATCAACTCGGTCTACGCCGCCCAGGGTCGGATCGCGGAGCTG
GCCGAGACGGCGGCCGACCCGCCCGCCGGGGTGCTGTGGGCGCTGCTGGACGCCGTCCGCGACGGAGCCTGGCGTGACGA
ATCCAGCCTGGCGAGCCTGCGCGGTTCGCTGTTCTCCCAGCTGAGGATGCCGATCCCGGGGTTTGCCGTCGGCCCGCCGA
TCATCGCCCCGGATGTCGACCCGACAGTCCTGGAACGGATCGCCGTGGCGGCCGGCGAGGTCCTGGCGCGGCTGCGCGCG
GAGCTCGCGGACGTCTGGGACGGCGACCGGGCGCGGGCGGCCGATCTCGTCGTCGACGCACTGTCCGCGCTGTCGACGGG
TGTGCTCGGCGGCGGGCCGGGCGACATACGGGTGCAGCCCGCGGTCACCAGGCTGCGCACGCTGGTCACCCGCGCGATGG
CGGCCGCCGGCCCGGTCGGCGGCGGGGCCTCGGCTGGCGGGGAAATGGACGGCGGGGGAGCGGAATCCCGGGCGGACCGG
TCGGCCGCCGCCCAGGAGACCATTGACGGGCTGGCCTGGCGAGTTCGGACCCAGGTGGGCACGGCCGGGCTCACCGACCT
GGTGGCGGAGGCCTTCGTCGAAATCCTCGAACGGCTCGACACCTCGGTCGACATCGACAATCTCAGCGCCGCGCTGCAGC
TGCGCTGGGCCCAGTAG

Upstream 100 bases:

>100_bases
GGACGACGATCTGGGTGGGGACGACACCAGAGGCGCCCCGGGCCCCGGCCCACGCGAGCCCGGTCCGGCCGGTGCGGACC
CGTGGTCGGCGGCCGAGGCG

Downstream 100 bases:

>100_bases
CCGGCACCGCCACCTGCAAAGGCAGGCAACCATGCGGAAATTCTCCTTCGGACGGCGCAACGGCCGTGGATTCGGCCTCG
ACAGCCACGACGTCGCGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MFRLAVCAFDDRPDLPAETHTLDALVSAMKRRQWLSAEESLALHAVLVAIFPNLAGRAVFQRGVAGTVDRPVRKRPLCVP
ALLECLPTARTRPDPILDELTEALTTPAGVATDRAELRRALDSLVSRASRPTMDLPASLQQYEIHLINSVYAAQGRIAEL
AETAADPPAGVLWALLDAVRDGAWRDESSLASLRGSLFSQLRMPIPGFAVGPPIIAPDVDPTVLERIAVAAGEVLARLRA
ELADVWDGDRARAADLVVDALSALSTGVLGGGPGDIRVQPAVTRLRTLVTRAMAAAGPVGGGASAGGEMDGGGAESRADR
SAAAQETIDGLAWRVRTQVGTAGLTDLVAEAFVEILERLDTSVDIDNLSAALQLRWAQ

Sequences:

>Translated_378_residues
MFRLAVCAFDDRPDLPAETHTLDALVSAMKRRQWLSAEESLALHAVLVAIFPNLAGRAVFQRGVAGTVDRPVRKRPLCVP
ALLECLPTARTRPDPILDELTEALTTPAGVATDRAELRRALDSLVSRASRPTMDLPASLQQYEIHLINSVYAAQGRIAEL
AETAADPPAGVLWALLDAVRDGAWRDESSLASLRGSLFSQLRMPIPGFAVGPPIIAPDVDPTVLERIAVAAGEVLARLRA
ELADVWDGDRARAADLVVDALSALSTGVLGGGPGDIRVQPAVTRLRTLVTRAMAAAGPVGGGASAGGEMDGGGAESRADR
SAAAQETIDGLAWRVRTQVGTAGLTDLVAEAFVEILERLDTSVDIDNLSAALQLRWAQ
>Mature_378_residues
MFRLAVCAFDDRPDLPAETHTLDALVSAMKRRQWLSAEESLALHAVLVAIFPNLAGRAVFQRGVAGTVDRPVRKRPLCVP
ALLECLPTARTRPDPILDELTEALTTPAGVATDRAELRRALDSLVSRASRPTMDLPASLQQYEIHLINSVYAAQGRIAEL
AETAADPPAGVLWALLDAVRDGAWRDESSLASLRGSLFSQLRMPIPGFAVGPPIIAPDVDPTVLERIAVAAGEVLARLRA
ELADVWDGDRARAADLVVDALSALSTGVLGGGPGDIRVQPAVTRLRTLVTRAMAAAGPVGGGASAGGEMDGGGAESRADR
SAAAQETIDGLAWRVRTQVGTAGLTDLVAEAFVEILERLDTSVDIDNLSAALQLRWAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39928; Mature: 39928

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRLAVCAFDDRPDLPAETHTLDALVSAMKRRQWLSAEESLALHAVLVAIFPNLAGRAVF
CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
QRGVAGTVDRPVRKRPLCVPALLECLPTARTRPDPILDELTEALTTPAGVATDRAELRRA
HHCCCCCCCCCHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHH
LDSLVSRASRPTMDLPASLQQYEIHLINSVYAAQGRIAELAETAADPPAGVLWALLDAVR
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHH
DGAWRDESSLASLRGSLFSQLRMPIPGFAVGPPIIAPDVDPTVLERIAVAAGEVLARLRA
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
ELADVWDGDRARAADLVVDALSALSTGVLGGGPGDIRVQPAVTRLRTLVTRAMAAAGPVG
HHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHHHCCCCC
GGASAGGEMDGGGAESRADRSAAAQETIDGLAWRVRTQVGTAGLTDLVAEAFVEILERLD
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC
TSVDIDNLSAALQLRWAQ
CCCCHHHHHHHHHEEECC
>Mature Secondary Structure
MFRLAVCAFDDRPDLPAETHTLDALVSAMKRRQWLSAEESLALHAVLVAIFPNLAGRAVF
CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
QRGVAGTVDRPVRKRPLCVPALLECLPTARTRPDPILDELTEALTTPAGVATDRAELRRA
HHCCCCCCCCCHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHH
LDSLVSRASRPTMDLPASLQQYEIHLINSVYAAQGRIAELAETAADPPAGVLWALLDAVR
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHH
DGAWRDESSLASLRGSLFSQLRMPIPGFAVGPPIIAPDVDPTVLERIAVAAGEVLARLRA
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
ELADVWDGDRARAADLVVDALSALSTGVLGGGPGDIRVQPAVTRLRTLVTRAMAAAGPVG
HHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHHHCCCCC
GGASAGGEMDGGGAESRADRSAAAQETIDGLAWRVRTQVGTAGLTDLVAEAFVEILERLD
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC
TSVDIDNLSAALQLRWAQ
CCCCHHHHHHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA