| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316987
Identifier: 158316987
GI number: 158316987
Start: 6281554
End: 6281955
Strand: Reverse
Name: 158316987
Synonym: Franean1_5231
Alternate gene names: NA
Gene position: 6281955-6281554 (Counterclockwise)
Preceding gene: 158316990
Following gene: 158316986
Centisome position: 69.94
GC content: 66.67
Gene sequence:
>402_bases ATGCCGGTGAGCAAGCCGAGTGAATTACCCGTGGGTGGCGGCGGACGCTGGCCCCTGACGGGGTTCCGCTCCGCCCAGTG GGGGGACATGGAAGTCGGGTACACGGCCACCGGGCCGCTCGACTGCACCAAGGGCTACATCGGTCTGCCTGGCGGTGTCT GCCAGTGCCCCCACTACGGTTACATGTTCAGCGGCAGGCTTCGCTGCGTGTATCCGGGTACCGACTGGCCGGACGAGGTC GCGGTGGCCGGCGAGGCGTATTTCTTCCCAGCCGGTCATGTCCTCATCTATGAGGAGCCGAGCGAGGTGCTCGAGCTCAA TCCCGCCGCCGCGCTCCAGCAGCTGATCGACCATTTCGAGGCCATGGCGGCCAGCGGTGGGTTCACCAAGGACGACGGCT GA
Upstream 100 bases:
>100_bases TGCACGATCCTGTTCCCAAGGGCGAGAGTGGGGTTCTACAGTTGGCGGGTGCCACGGCTGCGGTGACGGGGCTGTGTGGC GACAGGGCTGAGGAGGAAGC
Downstream 100 bases:
>100_bases TCCAGCCGACTCCGAGGGCGCCCGGACGCCCGCGTACCAGGACGTCCGGGCACGCCGCCGGCCTGACCCCGGTGGTCGGA ACGAGACACGAGAGAACGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MPVSKPSELPVGGGGRWPLTGFRSAQWGDMEVGYTATGPLDCTKGYIGLPGGVCQCPHYGYMFSGRLRCVYPGTDWPDEV AVAGEAYFFPAGHVLIYEEPSEVLELNPAAALQQLIDHFEAMAASGGFTKDDG
Sequences:
>Translated_133_residues MPVSKPSELPVGGGGRWPLTGFRSAQWGDMEVGYTATGPLDCTKGYIGLPGGVCQCPHYGYMFSGRLRCVYPGTDWPDEV AVAGEAYFFPAGHVLIYEEPSEVLELNPAAALQQLIDHFEAMAASGGFTKDDG >Mature_132_residues PVSKPSELPVGGGGRWPLTGFRSAQWGDMEVGYTATGPLDCTKGYIGLPGGVCQCPHYGYMFSGRLRCVYPGTDWPDEVA VAGEAYFFPAGHVLIYEEPSEVLELNPAAALQQLIDHFEAMAASGGFTKDDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14206; Mature: 14075
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVSKPSELPVGGGGRWPLTGFRSAQWGDMEVGYTATGPLDCTKGYIGLPGGVCQCPHYG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCEEECCCCCCCCCCEECCCCEECCCCCC YMFSGRLRCVYPGTDWPDEVAVAGEAYFFPAGHVLIYEEPSEVLELNPAAALQQLIDHFE EEECCEEEEEECCCCCCCCEEECCCEEEECCCCEEEEECCHHHEECCHHHHHHHHHHHHH AMAASGGFTKDDG HHHHCCCCCCCCC >Mature Secondary Structure PVSKPSELPVGGGGRWPLTGFRSAQWGDMEVGYTATGPLDCTKGYIGLPGGVCQCPHYG CCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCEEECCCCCCCCCCEECCCCEECCCCCC YMFSGRLRCVYPGTDWPDEVAVAGEAYFFPAGHVLIYEEPSEVLELNPAAALQQLIDHFE EEECCEEEEEECCCCCCCCEEECCCEEEECCCCEEEEECCHHHEECCHHHHHHHHHHHHH AMAASGGFTKDDG HHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA