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The map label for this gene is trkA [H]

Identifier: 158316947

GI number: 158316947

Start: 6234166

End: 6234897

Strand: Direct

Name: trkA [H]

Synonym: Franean1_5191

Alternate gene names: 158316947

Gene position: 6234166-6234897 (Clockwise)

Preceding gene: 158316938

Following gene: 158316948

Centisome position: 69.41

GC content: 72.54

Gene sequence:

>732_bases
ATGAGCTGCCAGGACAGGTGGCCGACAGACATCGACCGGGCAACCCCGATCGGACTACGCTCACCTCCCGTGCACGTCGT
GATCCTCGGCTGCGGCCGGGTCGGCTCATCCCTGGCTGGTGCCGTCGAGCGGCTCGGCCACTCGGTGGCCGTCATCGACC
AGAACCCGGCCGCGTTCAATCGCCTGTCGGCCGGCTTCGGCGGACGGGCGGTGACCGGCATGGGCTTCGACCGGGACACC
CTCGTCGAGGCCGGCATCGCCGGGGCGGCCGCGTTTGCCGCGGTCTCCAGCGGGGACAACTCGAACATCATCTCCGCCCG
GGTAGCCCGGGAGATGTTCGGCGTGGAGCGGGTGGTGGCCCGCATCTACGATCCCCGGCGGGCCGAGGTCTACGAACGCC
TCGGCATCCCCACCGTCGCCACGGTGCGCTGGACGCGCGACCAGATCCTCGGTCGTCTCGTCCCGGACGCCGTCACCCCC
GAGTGGACGGACACGTCCGGCTCGGTTCTGCTCACGGCGGTCACGCCGGCGCGTGGCTGGGTGGGACGGCGGCTCGCCGA
GCTGGAGTCCCGGGCCGAGGTCAGGGTGGCGTGCGTGACCCGGTTCGGTGACGGCCTGCTCCCCGACGGGCGGACCATGG
TGCAGGACGGCGACGTCCTGCACGTCGCGGTCGCCAAGGCGCGGGCCACCGAGGCGGACGCGATCATCCGCACCGGCCCC
GACCACGACTGA

Upstream 100 bases:

>100_bases
TCTGTGAGCGCCACGCGGCGATGCTACCGACCCCGGTCCCACCTCCCCAGCGTGTGTGACGTGGCGCACTCCAACCCGGC
CATAGCGGCACACGTGCCCG

Downstream 100 bases:

>100_bases
CGACGAGAGACGAGGACCTGCGATGACCGCGGATCCGGACGCGCGTACCGGGGGCACCGAACAGGACGGGGCCGCCGAGC
GGAGCGGGGTGGCGAACCGG

Product: TrkA domain-containing protein

Products: NA

Alternate protein names: K(+)-uptake protein trkA [H]

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MSCQDRWPTDIDRATPIGLRSPPVHVVILGCGRVGSSLAGAVERLGHSVAVIDQNPAAFNRLSAGFGGRAVTGMGFDRDT
LVEAGIAGAAAFAAVSSGDNSNIISARVAREMFGVERVVARIYDPRRAEVYERLGIPTVATVRWTRDQILGRLVPDAVTP
EWTDTSGSVLLTAVTPARGWVGRRLAELESRAEVRVACVTRFGDGLLPDGRTMVQDGDVLHVAVAKARATEADAIIRTGP
DHD

Sequences:

>Translated_243_residues
MSCQDRWPTDIDRATPIGLRSPPVHVVILGCGRVGSSLAGAVERLGHSVAVIDQNPAAFNRLSAGFGGRAVTGMGFDRDT
LVEAGIAGAAAFAAVSSGDNSNIISARVAREMFGVERVVARIYDPRRAEVYERLGIPTVATVRWTRDQILGRLVPDAVTP
EWTDTSGSVLLTAVTPARGWVGRRLAELESRAEVRVACVTRFGDGLLPDGRTMVQDGDVLHVAVAKARATEADAIIRTGP
DHD
>Mature_242_residues
SCQDRWPTDIDRATPIGLRSPPVHVVILGCGRVGSSLAGAVERLGHSVAVIDQNPAAFNRLSAGFGGRAVTGMGFDRDTL
VEAGIAGAAAFAAVSSGDNSNIISARVAREMFGVERVVARIYDPRRAEVYERLGIPTVATVRWTRDQILGRLVPDAVTPE
WTDTSGSVLLTAVTPARGWVGRRLAELESRAEVRVACVTRFGDGLLPDGRTMVQDGDVLHVAVAKARATEADAIIRTGPD
HD

Specific function: Part of a potassium transport system [H]

COG id: COG0569

COG function: function code P; K+ transport systems, NAD-binding component

Gene ontology:

Cell location: Peripherally Bound To The Inner Side Of The Inner Membrane Via The Trkg And Trkh Proteins [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RCK N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1789685, Length=207, Percent_Identity=27.0531400966184, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006036
- InterPro:   IPR016040
- InterPro:   IPR006037
- InterPro:   IPR003148 [H]

Pfam domain/function: PF02080 TrkA_C; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 25821; Mature: 25689

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSCQDRWPTDIDRATPIGLRSPPVHVVILGCGRVGSSLAGAVERLGHSVAVIDQNPAAFN
CCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCEEEEEECCCHHHH
RLSAGFGGRAVTGMGFDRDTLVEAGIAGAAAFAAVSSGDNSNIISARVAREMFGVERVVA
HHHCCCCCCEEECCCCCHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
RIYDPRRAEVYERLGIPTVATVRWTRDQILGRLVPDAVTPEWTDTSGSVLLTAVTPARGW
HHCCCHHHHHHHHHCCCEEEEEEECHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCH
VGRRLAELESRAEVRVACVTRFGDGLLPDGRTMVQDGDVLHVAVAKARATEADAIIRTGP
HHHHHHHHHHCCCEEEEEEECCCCCCCCCCCEEECCCCEEEEEEHHHHCCCCCEEEECCC
DHD
CCC
>Mature Secondary Structure 
SCQDRWPTDIDRATPIGLRSPPVHVVILGCGRVGSSLAGAVERLGHSVAVIDQNPAAFN
CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCEEEEEECCCHHHH
RLSAGFGGRAVTGMGFDRDTLVEAGIAGAAAFAAVSSGDNSNIISARVAREMFGVERVVA
HHHCCCCCCEEECCCCCHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
RIYDPRRAEVYERLGIPTVATVRWTRDQILGRLVPDAVTPEWTDTSGSVLLTAVTPARGW
HHCCCHHHHHHHHHCCCEEEEEEECHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCH
VGRRLAELESRAEVRVACVTRFGDGLLPDGRTMVQDGDVLHVAVAKARATEADAIIRTGP
HHHHHHHHHHCCCEEEEEEECCCCCCCCCCCEEECCCCEEEEEEHHHHCCCCCEEEECCC
DHD
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12000953; 2294088 [H]