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The map label for this gene is yebC [C]

Identifier: 158316903

GI number: 158316903

Start: 6168698

End: 6169453

Strand: Reverse

Name: yebC [C]

Synonym: Franean1_5147

Alternate gene names: 158316903

Gene position: 6169453-6168698 (Counterclockwise)

Preceding gene: 158316904

Following gene: 158316902

Centisome position: 68.69

GC content: 69.71

Gene sequence:

>756_bases
ATGAGCGGTCACTCCAAGTGGGCGACCACCAAGCACAAGAAGGCGGTCGTCGACGCCCGCCGGGGCAAGCTGTTCGCCAA
GCTGGTCAAGACCGTCGAAGTCGCGGCCAAGACGGGCGGCGGCGACCCGGCCGGCAACCCGACACTGGCGGACGCGATCG
CCAAGGCGAAGTCCCAGTCGGTGCCGAACGACAACATCGAACGGGCGATCAAGCGTGGCTCCGGCGAGCTCGCCGGCGGG
GTGAGCTACGAGTCGGTCACCTACGAGGCCTACGGGCCGAACGGGGTCGCCGTGCTCGTCGAGTGCCTCACCGACAACCG
CAACCGGGCCGCCTCCGACGTCCGGGTCGCGATCACCCGCAACGGCGGCACCCCCGCCGACCCGGGCTCGGTGTCGTACC
TGTTCAACCGCAAGGGCGTCGTCCTGATCGACAAGACGCCCACCCTCACCGAGGACGACATCCTCCTGGCCGTGCTGGAC
GCCGGGGCGGAGGAGGTCAACGACGTCGGGGAGGCGTTCGAGGTCGTCTCCGAGGCCACCGACCTGCACGCCGTGCGGGT
GGCGGCGGCGGAGGCCGACCTGACGGTCGCCTCGGCGGACATCTCCTGGCTGCCCTCGGTGAGCGTCCCGCTCGACGCGG
AGCCGGCCCGGAAGGTCCTCAAGCTGGTCGAGGCGCTCGAGGATCTCGACGACGTCCAGAACGTCTGGTTCAACGCGGAC
ATCTCCGACGACGTGATGGAGCTCGTCTCCAGCTGA

Upstream 100 bases:

>100_bases
TGGCCACGTCGTTCCATCCTGAACTGACGGGGGACATCCGGGTGCACCGGCTGTTCGTGGAGATCGTCCGATCCGAGCTC
GGGCTCAAGAGGGGCAGGTC

Downstream 100 bases:

>100_bases
GCCCGCGCCGTCCGGGTACTGCCGGGCGGCCGCCTGTTCGGCGTGTCGTGGATGTCGGTGTTGCCCCGGCCACTAGGATC
GAACGGATGTTCGTGAGTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MSGHSKWATTKHKKAVVDARRGKLFAKLVKTVEVAAKTGGGDPAGNPTLADAIAKAKSQSVPNDNIERAIKRGSGELAGG
VSYESVTYEAYGPNGVAVLVECLTDNRNRAASDVRVAITRNGGTPADPGSVSYLFNRKGVVLIDKTPTLTEDDILLAVLD
AGAEEVNDVGEAFEVVSEATDLHAVRVAAAEADLTVASADISWLPSVSVPLDAEPARKVLKLVEALEDLDDVQNVWFNAD
ISDDVMELVSS

Sequences:

>Translated_251_residues
MSGHSKWATTKHKKAVVDARRGKLFAKLVKTVEVAAKTGGGDPAGNPTLADAIAKAKSQSVPNDNIERAIKRGSGELAGG
VSYESVTYEAYGPNGVAVLVECLTDNRNRAASDVRVAITRNGGTPADPGSVSYLFNRKGVVLIDKTPTLTEDDILLAVLD
AGAEEVNDVGEAFEVVSEATDLHAVRVAAAEADLTVASADISWLPSVSVPLDAEPARKVLKLVEALEDLDDVQNVWFNAD
ISDDVMELVSS
>Mature_250_residues
SGHSKWATTKHKKAVVDARRGKLFAKLVKTVEVAAKTGGGDPAGNPTLADAIAKAKSQSVPNDNIERAIKRGSGELAGGV
SYESVTYEAYGPNGVAVLVECLTDNRNRAASDVRVAITRNGGTPADPGSVSYLFNRKGVVLIDKTPTLTEDDILLAVLDA
GAEEVNDVGEAFEVVSEATDLHAVRVAAAEADLTVASADISWLPSVSVPLDAEPARKVLKLVEALEDLDDVQNVWFNADI
SDDVMELVSS

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family [H]

Homologues:

Organism=Homo sapiens, GI27545315, Length=249, Percent_Identity=28.5140562248996, Blast_Score=114, Evalue=1e-25,
Organism=Escherichia coli, GI1788171, Length=247, Percent_Identity=46.1538461538462, Blast_Score=214, Evalue=5e-57,
Organism=Escherichia coli, GI1788294, Length=238, Percent_Identity=35.2941176470588, Blast_Score=119, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI17556100, Length=247, Percent_Identity=27.5303643724696, Blast_Score=80, Evalue=9e-16,
Organism=Saccharomyces cerevisiae, GI6321458, Length=266, Percent_Identity=34.2105263157895, Blast_Score=119, Evalue=3e-28,
Organism=Drosophila melanogaster, GI24583305, Length=250, Percent_Identity=26.4, Blast_Score=74, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002876
- InterPro:   IPR017856 [H]

Pfam domain/function: PF01709 DUF28 [H]

EC number: NA

Molecular weight: Translated: 26397; Mature: 26266

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGHSKWATTKHKKAVVDARRGKLFAKLVKTVEVAAKTGGGDPAGNPTLADAIAKAKSQS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC
VPNDNIERAIKRGSGELAGGVSYESVTYEAYGPNGVAVLVECLTDNRNRAASDVRVAITR
CCCHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCEEEEEEE
NGGTPADPGSVSYLFNRKGVVLIDKTPTLTEDDILLAVLDAGAEEVNDVGEAFEVVSEAT
CCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHH
DLHAVRVAAAEADLTVASADISWLPSVSVPLDAEPARKVLKLVEALEDLDDVQNVWFNAD
HHHHHHEEHHHCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCC
ISDDVMELVSS
CCHHHHHHHCC
>Mature Secondary Structure 
SGHSKWATTKHKKAVVDARRGKLFAKLVKTVEVAAKTGGGDPAGNPTLADAIAKAKSQS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC
VPNDNIERAIKRGSGELAGGVSYESVTYEAYGPNGVAVLVECLTDNRNRAASDVRVAITR
CCCHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCEEEEEEE
NGGTPADPGSVSYLFNRKGVVLIDKTPTLTEDDILLAVLDAGAEEVNDVGEAFEVVSEAT
CCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHH
DLHAVRVAAAEADLTVASADISWLPSVSVPLDAEPARKVLKLVEALEDLDDVQNVWFNAD
HHHHHHEEHHHCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCC
ISDDVMELVSS
CCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA